Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_K02
         (843 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    24   2.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   2.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   2.7  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   3.5  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   4.7  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   6.2  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   6.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   6.2  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 10/42 (23%), Positives = 18/42 (42%)
 Frame = +1

Query: 466 NILWLFCISGFLIWKSNSTSFTSXLRXSDNDCINEAENLGGP 591
           N + L C    L +  N++     +    N  +N +  +GGP
Sbjct: 148 NNIQLMCSPKLLAFDLNTSKLLKQIEIPHNIAVNASTGMGGP 189


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 740 PWKSEYWCSVARCWVR 787
           PW SEYW  V  C ++
Sbjct: 279 PWFSEYWEEVFDCLLK 294


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 740 PWKSEYWCSVARCWVR 787
           PW SEYW  V  C ++
Sbjct: 369 PWFSEYWEEVFDCLLK 384


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -3

Query: 286 LFLQLQIL*YLPICQLSLSIRLRKRHLMFLNNYL-EKACNV 167
           +F+ LQ L    I      ++++++H +F+NN L   AC++
Sbjct: 250 VFIGLQSLSLTNIQLEHFEMKIKRKHNVFVNNILAASACSL 290


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 493 GFLIWKSNSTSFTSXLRXSDNDCINEAE 576
           GF+I  +N+  ++   + S++  INE+E
Sbjct: 32  GFIIQNNNNDDWSVGKKNSNSGTINESE 59


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 403 RKTSCCRNW 377
           RK +CCR+W
Sbjct: 396 RKKNCCRSW 404


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 403 RKTSCCRNW 377
           RK +CCR+W
Sbjct: 396 RKKNCCRSW 404


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = -3

Query: 430 IYHIC-FRKLRKTSCCRNWWD 371
           IY++  FR L K +   NWWD
Sbjct: 387 IYNMVRFRNLVKGTKIDNWWD 407


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,386
Number of Sequences: 438
Number of extensions: 4388
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)