Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_K01
         (900 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    26   0.46 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.81 
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    23   3.3  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   4.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   4.3  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 18/65 (27%), Positives = 23/65 (35%)
 Frame = -3

Query: 268 HSSKYWFALQTCYPYCLAIFFEVSXTXFXXXIFXXCVSVMXXXXFYYXXLSXXLLSXMXS 89
           H SK        +   L + F VS       IF  CV V      +   L   L+  M +
Sbjct: 584 HLSKLVTRFNEIFGLGLLLMFGVSFLLITQTIFIICVIVQSEQIAWLHLLYIFLVGIMYA 643

Query: 88  AXXFY 74
           A  FY
Sbjct: 644 ADVFY 648


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 18/81 (22%), Positives = 28/81 (34%)
 Frame = -3

Query: 268 HSSKYWFALQTCYPYCLAIFFEVSXTXFXXXIFXXCVSVMXXXXFYYXXLSXXLLSXMXS 89
           H SK        +   L + F VS       IF  CV V      +   +    L  + +
Sbjct: 228 HLSKLVTRFNEIFGLGLLLMFAVSFLIITQVIFVICVLVQSEKIVWLHLVYISFLGIICA 287

Query: 88  AXXFYXXNMTTXXKYEXRPRV 26
           A  FY  ++      E R ++
Sbjct: 288 ADVFYICHVCYATIQEVRAKI 308


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 452 NWQATKPTVRERNAAMFNNQLMSDXTFIVGA 544
           N ++ KP + +R  A  NN L    T I+ A
Sbjct: 34  NRRSNKPIMEKRRRARINNSLNELKTLILDA 64


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 706 CDEIQLEADTVLSTLYVAXKYIV 774
           CD   +E  TVL  L V   Y++
Sbjct: 356 CDYFTIETKTVLDVLGVTVTYLI 378


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 706 CDEIQLEADTVLSTLYVAXKYIV 774
           CD   +E  TVL  L V   Y++
Sbjct: 282 CDYFTIETKTVLDVLGVTVTYLI 304


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,706
Number of Sequences: 336
Number of extensions: 4018
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)