Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_J24
(899 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 216 2e-56
02_04_0017 + 18937774-18937864,18938505-18940945 216 2e-56
01_06_0662 + 30987187-30987277,30987825-30990214 209 2e-54
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 208 6e-54
03_05_0511 + 25056018-25059107 109 4e-24
02_04_0148 - 20198407-20201424 105 6e-23
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 99 2e-21
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 95 9e-20
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 83 2e-16
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 82 7e-16
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 81 9e-16
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 79 6e-15
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 69 4e-12
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 52 8e-07
02_04_0462 + 23131433-23132836 52 8e-07
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 40 0.003
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 40 0.003
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 39 0.005
03_01_0548 + 4099386-4099847,4100435-4101316 37 0.025
03_01_0547 + 4093196-4093657,4094267-4095148 37 0.025
03_01_0544 + 4082528-4082989,4083585-4084466 37 0.025
03_01_0543 + 4076981-4077442,4078145-4079026 37 0.025
08_02_0059 - 11778739-11780998,11781744-11781751 33 0.31
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 33 0.41
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 32 0.71
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 31 1.2
07_03_0752 - 21241883-21242233,21242336-21242486,21242586-212428... 30 2.9
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 29 3.8
05_04_0199 + 18980017-18980759,18981478-18981532 29 5.0
08_02_1553 + 27835320-27835364,27836853-27836966,27837062-278374... 29 6.7
01_01_0699 + 5405178-5405356,5405478-5405693,5405808-5405919,540... 29 6.7
07_03_1479 - 26832976-26833095,26833737-26833943,26834104-268342... 28 8.8
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 216 bits (528), Expect = 2e-56
Identities = 112/174 (64%), Positives = 133/174 (76%)
Frame = +3
Query: 120 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 299
MV FTV+E+R +MDKK NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA AG+ R TDTR
Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 300 KDEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVT 479
DE +R ITIKST IS+F+E+ ++ L +R+ +E +LINLIDSPGHVDFSSEVT
Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKG--ERDGNE--YLINLIDSPGHVDFSSEVT 116
Query: 480 AALRVTDGALXXXXXXXXXXXQTETVLRQAIAGRIKPILFMNKMDRALLELQLE 641
AALR+TDGAL QTETVLRQA+ RI+P+L +NKMDR LELQ+E
Sbjct: 117 AALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVE 170
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 216 bits (528), Expect = 2e-56
Identities = 112/174 (64%), Positives = 133/174 (76%)
Frame = +3
Query: 120 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 299
MV FTV+E+R +MDKK NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA AG+ R TDTR
Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 300 KDEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVT 479
DE +R ITIKST IS+F+E+ ++ L +R+ +E +LINLIDSPGHVDFSSEVT
Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKG--ERDGNE--YLINLIDSPGHVDFSSEVT 116
Query: 480 AALRVTDGALXXXXXXXXXXXQTETVLRQAIAGRIKPILFMNKMDRALLELQLE 641
AALR+TDGAL QTETVLRQA+ RI+P+L +NKMDR LELQ+E
Sbjct: 117 AALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVE 170
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 209 bits (511), Expect = 2e-54
Identities = 108/173 (62%), Positives = 132/173 (76%)
Frame = +3
Query: 120 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 299
MV FTV+E+R +MDKK NIRNMSV+AHVDHGKSTLTDSLV+ AGIIA AG+ R TD+R
Sbjct: 1 MVKFTVEEMRRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSR 60
Query: 300 KDEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVT 479
DE +R ITIKST IS+++E+ ++ L + R+ +E +LINLIDSPGHVDFSSEVT
Sbjct: 61 SDEAERGITIKSTGISLYYEMSDESLK--SYKGDRDGNE--YLINLIDSPGHVDFSSEVT 116
Query: 480 AALRVTDGALXXXXXXXXXXXQTETVLRQAIAGRIKPILFMNKMDRALLELQL 638
AALR+TDGAL QTETVLRQA+ RI+P+L +NKMDR LELQ+
Sbjct: 117 AALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQV 169
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 208 bits (507), Expect = 6e-54
Identities = 107/172 (62%), Positives = 127/172 (73%)
Frame = +3
Query: 120 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 299
MV FT +E+R MDKK NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA AG+ R TDTR
Sbjct: 1 MVRFTAEELRASMDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDTR 60
Query: 300 KDEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVT 479
DE +R ITIKST IS+++E+ + L + ++ +LINLIDSPGH+DFSSEVT
Sbjct: 61 ADEAERGITIKSTGISLYYEMTDAAL----RSFEGKRDGNSYLINLIDSPGHIDFSSEVT 116
Query: 480 AALRVTDGALXXXXXXXXXXXQTETVLRQAIAGRIKPILFMNKMDRALLELQ 635
AALR+TDGAL QTETVLRQ++A RIKP+L +NKMDR LELQ
Sbjct: 117 AALRITDGALVVVDCIEGVCVQTETVLRQSLAERIKPVLTVNKMDRCFLELQ 168
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 109 bits (261), Expect = 4e-24
Identities = 64/159 (40%), Positives = 86/159 (54%), Gaps = 2/159 (1%)
Frame = +3
Query: 168 RNIRNMSVIAHVDHGKSTLTDSLVSKAG--IIAGARAGETRFTDTRKDEQDRCITIKSTA 341
R +RN ++AHVDHGK+TL D LV+ G ++ AG RF D +EQ R IT+KS A
Sbjct: 8 RRVRNTCILAHVDHGKTTLADHLVASCGDGLVHPRLAGRLRFMDYLDEEQRRAITMKSAA 67
Query: 342 ISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXX 521
+ + G +NLIDSPGH+DF SEV++A R++D AL
Sbjct: 68 VVLH--------------------HGGHRVNLIDSPGHIDFCSEVSSAARLSDSALILVD 107
Query: 522 XXXXXXXQTETVLRQAIAGRIKPILFMNKMDRALLELQL 638
QT LRQA R++P L +NK+DR + EL L
Sbjct: 108 AVEGVHIQTHAALRQAFLERLRPCLVLNKLDRLISELHL 146
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 105 bits (251), Expect = 6e-23
Identities = 62/160 (38%), Positives = 89/160 (55%), Gaps = 3/160 (1%)
Frame = +3
Query: 168 RNIRNMSVIAHVDHGKSTLTDSLVSKAGI---IAGARAGETRFTDTRKDEQDRCITIKST 338
R +RN ++AHVDHGK++L D L++ G ++ AG R D ++EQ R IT+KS
Sbjct: 14 RRVRNTCILAHVDHGKTSLADHLIAAYGSERRVSERMAGSARVMDHLEEEQRRAITMKSA 73
Query: 339 AISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXX 518
+I++ E+ G ++LIDSPGH+DF SEV+AA R+ D AL
Sbjct: 74 SIALRRGGEDGG---------------GHRVHLIDSPGHIDFCSEVSAAARLADSALVLV 118
Query: 519 XXXXXXXXQTETVLRQAIAGRIKPILFMNKMDRALLELQL 638
QT LRQA R++P L +NK+DR + EL+L
Sbjct: 119 DAAEGVRVQTHAALRQAFVERLRPCLVLNKVDRLVAELRL 158
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 99 bits (238), Expect = 2e-21
Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 3/172 (1%)
Frame = +3
Query: 132 TVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA-GE--TRFTDTRK 302
T D + G+ +RN++++ H+ HGK+ D LV + + + GE RFTDTR
Sbjct: 134 TTDFLLGLAANPALVRNVALVGHLQHGKTVFMDMLVEQTHEVDTFDSEGERHVRFTDTRV 193
Query: 303 DEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTA 482
DEQ+R ++IK+ +S+ E + K +L N++D+PGHV+FS E+TA
Sbjct: 194 DEQERRVSIKAVPMSLVLE---------------GGNGKSYLCNIMDTPGHVNFSDEMTA 238
Query: 483 ALRVTDGALXXXXXXXXXXXQTETVLRQAIAGRIKPILFMNKMDRALLELQL 638
ALR+ DGA+ TE +R A R+ ++ +NK+DR + EL+L
Sbjct: 239 ALRIADGAVLVVDAAEGVMVNTERAIRHATQERLPIVVVINKVDRLITELKL 290
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 94.7 bits (225), Expect = 9e-20
Identities = 55/148 (37%), Positives = 77/148 (52%)
Frame = +3
Query: 174 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMF 353
+RN S+IAHVDHGKSTL D L+ G I G+ ++ D + E++R IT+K+ +MF
Sbjct: 57 VRNFSIIAHVDHGKSTLADRLLELTGTIKKGH-GQPQYLDKLQVERERGITVKAQTATMF 115
Query: 354 FELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXX 533
+ L PD +L+NLID+PGHVDFS EV+ +L GAL
Sbjct: 116 YRHANNQLPASDQPDA-----PSYLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQG 170
Query: 534 XXXQTETVLRQAIAGRIKPILFMNKMDR 617
QT A + I +NK+D+
Sbjct: 171 VQAQTIANFYLAFESNLSIIPVINKIDQ 198
>05_05_0156 +
22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 83.4 bits (197), Expect = 2e-16
Identities = 58/168 (34%), Positives = 92/168 (54%)
Frame = +3
Query: 138 DEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 317
+E+ +M K NIRN+ VIA HGK+ + DSLV+ AGI + Q+
Sbjct: 211 EELHSIMCNKNNIRNVLVIADAGHGKTAILDSLVATAGITS----------------QE- 253
Query: 318 CITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVT 497
+T ++ IS+++E+ E L + D+R + G LINLIDSP + S++V AL +
Sbjct: 254 -VTESNSLISLYYEMPEDSLR--SYKDKR--AGNGHLINLIDSPVCCNLSNDVQPALCIM 308
Query: 498 DGALXXXXXXXXXXXQTETVLRQAIAGRIKPILFMNKMDRALLELQLE 641
DGAL T+T +R+A+ +I+P+ +NK+DR LE ++
Sbjct: 309 DGALVVVDSFEGVTLWTKTSIREALNMKIQPVFTLNKIDRFFLEQNVD 356
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 81.8 bits (193), Expect = 7e-16
Identities = 53/148 (35%), Positives = 77/148 (52%)
Frame = +3
Query: 171 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISM 350
NIRN S+IAH+DHGKSTL D L+ G + R + +F D E++R ITIK A M
Sbjct: 76 NIRNFSIIAHIDHGKSTLADKLLELTGTVQ-KREMKQQFLDNMDLERERGITIKLQAARM 134
Query: 351 FFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXX 530
+ + ++ + +NLID+PGHVDFS EV+ +L +GAL
Sbjct: 135 RYIMNDEP----------------YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQ 178
Query: 531 XXXXQTETVLRQAIAGRIKPILFMNKMD 614
QT + A+ ++ I +NK+D
Sbjct: 179 GVEAQTLANVYLALENDLEIIPVLNKID 206
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 81.4 bits (192), Expect = 9e-16
Identities = 49/151 (32%), Positives = 79/151 (52%)
Frame = +3
Query: 165 KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAI 344
+R++RN++++AHVDHGK+TL DS++ +A + + + R D+ E++R ITI S
Sbjct: 116 RRDVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVVQERIMDSNDLERERGITILSKNT 175
Query: 345 SMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXX 524
S+ + KG IN+ID+PGH DF EV L + +G L
Sbjct: 176 SITY--------------------KGTKINIIDTPGHSDFGGEVERVLNMVEGVLLVVDS 215
Query: 525 XXXXXXQTETVLRQAIAGRIKPILFMNKMDR 617
QT VL++A+ ++ +NK+DR
Sbjct: 216 VEGPMPQTRFVLKKALEFGHAVVVVVNKIDR 246
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 78.6 bits (185), Expect = 6e-15
Identities = 54/156 (34%), Positives = 81/156 (51%)
Frame = +3
Query: 150 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITI 329
G +D R IRN++VIAHVDHGK+TL D L+ + G A R D+ E++R ITI
Sbjct: 57 GALDPSR-IRNVAVIAHVDHGKTTLMDRLLRQCG----ADIPHERAMDSISLERERGITI 111
Query: 330 KSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 509
S S+ ++ E +N++D+PGH DF EV + + +GA+
Sbjct: 112 ASKVTSVSWKENE--------------------LNMVDTPGHADFGGEVERVVGMVEGAV 151
Query: 510 XXXXXXXXXXXQTETVLRQAIAGRIKPILFMNKMDR 617
QT+ VL +A+ ++PIL +NK+DR
Sbjct: 152 LVVDAGEGPLAQTKFVLSKALKYGLRPILLLNKVDR 187
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 69.3 bits (162), Expect = 4e-12
Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Frame = +3
Query: 141 EIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII-----AGARAGETRFTDTRKD 305
E+ + +RN+ + AH+D GK+TLT+ ++ G I R G D+
Sbjct: 57 EVARWRESMDRMRNIGISAHIDSGKTTLTERVLYYTGRIHEIHEVRGRDGVGAKMDSMDL 116
Query: 306 EQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAA 485
E+++ ITI+S A + G+ +N+ID+PGHVDF+ EV A
Sbjct: 117 EREKGITIQSAATYCTWN--------------------GYQVNIIDTPGHVDFTIEVERA 156
Query: 486 LRVTDGALXXXXXXXXXXXQTETVLRQAIAGRIKPILFMNKMDR 617
LRV DGA+ Q+ TV RQ I + F+NK+DR
Sbjct: 157 LRVLDGAILVLCSVGGVQSQSITVDRQMRRYEIPRVAFINKLDR 200
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 51.6 bits (118), Expect = 8e-07
Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Frame = +3
Query: 177 RNMSVI-AHVDHGKSTLTDSLVSKAGIIAGARAGE----TRFTDTRKDEQDRCITIKSTA 341
R++SVI AH+D GK+T T+ ++ G + GE T D + EQ+R ITI S
Sbjct: 104 RHISVIMAHIDAGKTTTTERVLYYTG--RNYKIGEFQEGTVTMDWMEQEQERGITITSPP 161
Query: 342 ISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 509
+ F+ IN+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 162 TTAFWNKHR--------------------INIIDTPGHVDFTLEVERALRVLDGAI 197
>02_04_0462 + 23131433-23132836
Length = 467
Score = 51.6 bits (118), Expect = 8e-07
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 1/158 (0%)
Frame = +3
Query: 147 RGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCIT 326
RG ++ + N+ I HVDHGK+TLT +L + G+ + D +E+ R IT
Sbjct: 61 RGKFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARGIT 120
Query: 327 IKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 506
I + + +E E + +D PGH D+ + DGA
Sbjct: 121 INTATVE--YETETRHYAH------------------VDCPGHADYVKNMITGAAQMDGA 160
Query: 507 LXXXXXXXXXXXQT-ETVLRQAIAGRIKPILFMNKMDR 617
+ QT E +L G K ++F+NK D+
Sbjct: 161 ILVVSGADGPMPQTKEHILLAKQVGVPKIVVFLNKKDQ 198
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 39.9 bits (89), Expect = 0.003
Identities = 28/110 (25%), Positives = 49/110 (44%)
Frame = +3
Query: 180 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 359
N++++ HVD GKSTL+ L+ G R + K+ +++ + A +M
Sbjct: 249 NLAIVGHVDSGKSTLSGRLLHLLG-----RISKKDMHKNEKEAKEKGKGSFAYAWAMDES 303
Query: 360 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 509
EE++ K + + L+DSPGH DF + + D A+
Sbjct: 304 SEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAI 353
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 39.9 bits (89), Expect = 0.003
Identities = 28/110 (25%), Positives = 49/110 (44%)
Frame = +3
Query: 180 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 359
N++++ HVD GKSTL+ L+ G R + K+ +++ + A +M
Sbjct: 249 NLAIVGHVDSGKSTLSGRLLHLLG-----RISKKDMHKNEKEAKEKGKGSFAYAWAMDES 303
Query: 360 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 509
EE++ K + + L+DSPGH DF + + D A+
Sbjct: 304 SEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAI 353
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 39.1 bits (87), Expect = 0.005
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 1/146 (0%)
Frame = +3
Query: 180 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 359
N+ I HVDHGK+TLT ++ A+A D +E+ R ITI + + +E
Sbjct: 69 NVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARGITIATAHVE--YE 126
Query: 360 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDF-SSEVTAALRVTDGALXXXXXXXXX 536
++ +D PGH D+ + +T A ++ G L
Sbjct: 127 TAKRHYAH------------------VDCPGHADYVKNMITGAAQMDGGILVVSAPDGPM 168
Query: 537 XXQTETVLRQAIAGRIKPILFMNKMD 614
E +L G + F+NK+D
Sbjct: 169 PQTKEHILLARQVGVPSLVCFLNKVD 194
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 36.7 bits (81), Expect = 0.025
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 156 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 335
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 336 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 509
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 36.7 bits (81), Expect = 0.025
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 156 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 335
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 336 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 509
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 36.7 bits (81), Expect = 0.025
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 156 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 335
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 336 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 509
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 36.7 bits (81), Expect = 0.025
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 156 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 335
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 336 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 509
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>08_02_0059 - 11778739-11780998,11781744-11781751
Length = 755
Score = 33.1 bits (72), Expect = 0.31
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -2
Query: 340 AVDLMVMQRSCSSLRVSVKRVSPALAPAM-IPALETNESVRVDLP*STWAITDMLRIFRF 164
A+ MV R S+ S++R+ P++ + ++ +S+ +LP S W IT + +F
Sbjct: 454 AIGGMVHLRYLSTRCRSLRRIHPSIGNLKNLQTIDVRQSLVHELPCSFWKITSLRHVFGS 513
Query: 163 LSIIPRISSTVK 128
I+PR + +K
Sbjct: 514 ELIVPRWTRELK 525
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 32.7 bits (71), Expect = 0.41
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +3
Query: 420 GFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAGRIKPILF 599
G I +D+PGH FS+ VTD + QT + A A + ++
Sbjct: 244 GASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPIVVA 303
Query: 600 MNKMDRA 620
+NK D++
Sbjct: 304 VNKCDKS 310
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 183 MSVIAHVDHGKSTLTDSL 236
++++ HVDHGK++L DSL
Sbjct: 200 VTIMGHVDHGKTSLLDSL 217
>05_07_0212 +
28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 31.9 bits (69), Expect = 0.71
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 183 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 284
++++ HVDHGK+TL D + K+ ++A G T+
Sbjct: 430 VTIMGHVDHGKTTLLD-YIRKSKVVASEAGGITQ 462
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +3
Query: 438 IDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAGRIKPILFMNKM 611
+D+PGH F + RVTD + QT + A A + ++ +NK+
Sbjct: 483 LDTPGHEAFGAMRARGARVTDICIIVVSADDGVRPQTNEAIAHAKAAGVPIVIAINKV 540
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +3
Query: 399 QREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAG 578
+R K K + +ID+PGH FS+ + + + D A+ QT L
Sbjct: 495 ERAKPHKVPGLLVIDTPGHESFSNMRSRGMSLCDIAVVVVDIMHGLEKQTVETLALLKDR 554
Query: 579 RIKPILFMNKMDR 617
++ I+ +NK+DR
Sbjct: 555 NVRFIVVLNKVDR 567
>07_03_0752 -
21241883-21242233,21242336-21242486,21242586-21242823,
21242917-21243127,21243214-21243344,21245046-21245931,
21246087-21246140,21246397-21246461,21246842-21246892,
21246960-21247029,21247493-21247597
Length = 770
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -2
Query: 400 WSGFVMNTKSFSSSSKNIEMAVDLMVMQRSCSSLRVSVKRVSPALAPAMIPA 245
W F NT+ S M V+L S L++ + V+P+ +PA PA
Sbjct: 348 WQTFEPNTQGARSVGARCNMRVELYSFYNVPSMLQLQAEAVAPSPSPAPAPA 399
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 29.5 bits (63), Expect = 3.8
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +3
Query: 420 GFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAGRIKPILF 599
GFL+ ID+PGH FS+ T + D A+ QT L + I+
Sbjct: 486 GFLV--IDTPGHQSFSNLRTRGSSLCDIAILVVDIMRGIQAQTIESLNILKRHKADFIIV 543
Query: 600 MNKMDR 617
+NK+DR
Sbjct: 544 LNKVDR 549
>05_04_0199 + 18980017-18980759,18981478-18981532
Length = 265
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +2
Query: 146 PWDDGQEAEYPQHVCDRPRRSRQVNPHGLVGFQGRYHCWC 265
PW GQ P + C R R P+G R C C
Sbjct: 190 PWKGGQGGNNPDYECLRAELRRMAPPNGRAVLLFRNRCGC 229
>08_02_1553 +
27835320-27835364,27836853-27836966,27837062-27837457,
27837751-27837822,27837957-27838082,27838164-27838244,
27838364-27838558,27839018-27840013
Length = 674
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 280 PVSLTRVRTNKTVASPLNLRPSLCSSSLKRKI*YSSQTL 396
P+S R R N +P N PS S+ ++ YS Q++
Sbjct: 587 PLSAARSRNNPAAPAPTNAAPSSSSTLPSERLTYSGQSI 625
>01_01_0699 +
5405178-5405356,5405478-5405693,5405808-5405919,
5406335-5406397,5406468-5406606,5406822-5406877,
5408088-5408161,5408270-5408417,5408505-5408678,
5408809-5408896,5408996-5409109,5409728-5409825,
5409927-5410017,5410440-5410534,5410672-5410825,
5410864-5410876,5411276-5411384
Length = 640
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 193 SPTSITASQPSRTRWFPRPVSLLVREPERPVSLTRVRTNKTVASP 327
SP A+ P R W PRP S P P+SL R + + P
Sbjct: 18 SPLPFAAAHPCRASWTPRPTS-----PLPPLSLLRATASMHPSPP 57
>07_03_1479 - 26832976-26833095,26833737-26833943,26834104-26834252,
26834330-26834732,26834840-26835118,26835285-26835716,
26836362-26836838,26837171-26837212,26837285-26837545,
26837637-26838938,26839146-26839575,26839643-26840046,
26840360-26840716,26840842-26841102,26841494-26842141,
26842231-26842452,26842547-26842768,26842860-26843009,
26843739-26844111,26844467-26844689,26845167-26845425,
26845585-26845920,26846013-26846999,26848395-26849624,
26849706-26849768,26849858-26849910,26849998-26850079,
26850520-26850588,26851070-26851129,26851205-26851267,
26851993-26852101,26852742-26852827,26853120-26853847,
26854613-26854676
Length = 3716
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -2
Query: 373 SFSSSSKNIEMAVDLMVMQRSCSSLRVSVKRVSPALAPAMIPALETNES 227
S S SKNIE V + C +LR + ++SP L + AL+ E+
Sbjct: 1187 SRSLRSKNIEQQVGTVTALNFCLALRPPLLKLSPELVNFLQEALQIAEA 1235
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,816,470
Number of Sequences: 37544
Number of extensions: 415608
Number of successful extensions: 1209
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -