Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_J23
         (905 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD...   348   7e-96
AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA...   348   7e-96
AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p pro...   261   8e-70
AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB...   261   8e-70
X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal prot...   175   5e-44
AY071534-1|AAL49156.1|  181|Drosophila melanogaster RE57564p pro...    50   6e-06
AE013599-2494|AAF57847.2|  181|Drosophila melanogaster CG4866-PA...    50   6e-06
AY069336-1|AAL39481.1|  258|Drosophila melanogaster LD05259p pro...    29   6.6  
AE014297-401|AAF51920.1|  258|Drosophila melanogaster CG10287-PA...    29   6.6  
AF070734-1|AAD09748.1|  218|Drosophila melanogaster Gasp precurs...    29   8.8  
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA...    29   8.8  

>AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD,
           isoform D protein.
          Length = 195

 Score =  348 bits (855), Expect = 7e-96
 Identities = 166/184 (90%), Positives = 176/184 (95%)
 Frame = +1

Query: 91  MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 270
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 271 LLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 450
           LLTL+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120

Query: 451 AKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLR 630
           AKSIHHAR+LIRQRHIRVRKQVVNIPSF+VRLDS KHIDFSLKSPFGGGRPGRVKRKNL+
Sbjct: 121 AKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLK 180

Query: 631 QGTG 642
           +  G
Sbjct: 181 KNQG 184


>AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA,
           isoform A protein.
          Length = 195

 Score =  348 bits (855), Expect = 7e-96
 Identities = 166/184 (90%), Positives = 176/184 (95%)
 Frame = +1

Query: 91  MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 270
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 271 LLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 450
           LLTL+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120

Query: 451 AKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLR 630
           AKSIHHAR+LIRQRHIRVRKQVVNIPSF+VRLDS KHIDFSLKSPFGGGRPGRVKRKNL+
Sbjct: 121 AKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLK 180

Query: 631 QGTG 642
           +  G
Sbjct: 181 KNQG 184


>AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p
           protein.
          Length = 137

 Score =  261 bits (640), Expect = 8e-70
 Identities = 125/137 (91%), Positives = 132/137 (96%)
 Frame = +1

Query: 91  MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 270
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 271 LLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 450
           LLTL+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120

Query: 451 AKSIHHARILIRQRHIR 501
           AKSIHHAR+LIRQRHIR
Sbjct: 121 AKSIHHARVLIRQRHIR 137


>AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB,
           isoform B protein.
          Length = 137

 Score =  261 bits (640), Expect = 8e-70
 Identities = 125/137 (91%), Positives = 132/137 (96%)
 Frame = +1

Query: 91  MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 270
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 271 LLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 450
           LLTL+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120

Query: 451 AKSIHHARILIRQRHIR 501
           AKSIHHAR+LIRQRHIR
Sbjct: 121 AKSIHHARVLIRQRHIR 137


>X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal protein
           protein.
          Length = 197

 Score =  175 bits (427), Expect = 5e-44
 Identities = 101/178 (56%), Positives = 122/178 (68%), Gaps = 1/178 (0%)
 Frame = +1

Query: 91  MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 270
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGL+  R V  VKY LA+IRK ARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLQQARSV-AVKYALAKIRKVARE 59

Query: 271 LLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 450
           LLTL+EKD KRLF+G +L+RRLVRIGVL +   +     G +    L         +AGL
Sbjct: 60  LLTLDEKDAKRLFQGKSLVRRLVRIGVL-KSPHEARLRAGSEDSGLLGASSADAGVQAGL 118

Query: 451 AKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHI-DFSLKSPFGGGRPGRVKRK 621
           AKSIHHAR+LIRQR   +  +   IPSF+V     +   +FSLK P    RP R +++
Sbjct: 119 AKSIHHARVLIRQRTFVLASRWSTIPSFVVTPGLPEATSNFSLKMPL-RTRPSRSRQE 175


>AY071534-1|AAL49156.1|  181|Drosophila melanogaster RE57564p
           protein.
          Length = 181

 Score = 49.6 bits (113), Expect = 6e-06
 Identities = 29/123 (23%), Positives = 60/123 (48%)
 Frame = +1

Query: 172 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGV 351
           +E KI+  + ++ + +  +       IR+ A  +  L+  +P +      LL +L  +GV
Sbjct: 28  KENKILRRFHIQKREDYTKYNKLSREIRELAERIAKLDASEPFKTEATTMLLNKLHAMGV 87

Query: 352 LDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPS 531
            ++ Q+ L+    +    F  RRL   + K  +++ +  A  LI   H+RV  +++  P+
Sbjct: 88  SND-QLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVRVGPEMIKDPA 146

Query: 532 FIV 540
           F+V
Sbjct: 147 FLV 149


>AE013599-2494|AAF57847.2|  181|Drosophila melanogaster CG4866-PA
           protein.
          Length = 181

 Score = 49.6 bits (113), Expect = 6e-06
 Identities = 29/123 (23%), Positives = 60/123 (48%)
 Frame = +1

Query: 172 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGV 351
           +E KI+  + ++ + +  +       IR+ A  +  L+  +P +      LL +L  +GV
Sbjct: 28  KENKILRRFHIQKREDYTKYNKLSREIRELAERIAKLDASEPFKTEATTMLLNKLHAMGV 87

Query: 352 LDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPS 531
            ++ Q+ L+    +    F  RRL   + K  +++ +  A  LI   H+RV  +++  P+
Sbjct: 88  SND-QLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVRVGPEMIKDPA 146

Query: 532 FIV 540
           F+V
Sbjct: 147 FLV 149


>AY069336-1|AAL39481.1|  258|Drosophila melanogaster LD05259p
           protein.
          Length = 258

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 414 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQA 512
           A   DA V  W  +V P C+N + A  +SCP A
Sbjct: 127 AYDRDARVCMWADQV-PECKNEEVANGFSCPAA 158


>AE014297-401|AAF51920.1|  258|Drosophila melanogaster CG10287-PA
           protein.
          Length = 258

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 414 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQA 512
           A   DA V  W  +V P C+N + A  +SCP A
Sbjct: 127 AYDRDARVCMWADQV-PECKNEEVANGFSCPAA 158


>AF070734-1|AAD09748.1|  218|Drosophila melanogaster Gasp precursor
           protein.
          Length = 218

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 426 DAGVQSWPGEVHPSCQNFDPAKAYSCPQA 512
           DA V  W  +V P C+N + A  +SCP A
Sbjct: 131 DARVCMWADQV-PECKNEEVANGFSCPAA 158


>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
            protein.
          Length = 1958

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -3

Query: 513  LLADTNMPLPDQNSGMMDGLRQASFEHLRLQTTLQEVLNLQTKHIIEFHLFFIQYSN 343
            LL   + PLP  NSG  +  +QA   H  +      V N + K +++  L  +Q+ +
Sbjct: 1095 LLMRLSQPLPASNSGRANLFQQAVPHHKDVHPKASSVYNPRIKEVLQVLLQALQFKH 1151


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,124,980
Number of Sequences: 53049
Number of extensions: 710531
Number of successful extensions: 1719
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1716
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)