Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_J22
(945 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 40 5e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.005
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.019
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.044
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.077
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.24
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.24
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.31
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 0.31
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.41
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 28 2.2
SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr 2|... 27 5.1
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 6.7
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 26 8.9
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.9 bits (89), Expect = 5e-04
Identities = 34/157 (21%), Positives = 37/157 (23%)
Frame = +3
Query: 429 GGGXXXXXXKTPPPPXXXXGAGXIXXXXXXXXXXXXXXXXXXXXXGGXXPPPPXKGGDXR 608
G G PPPP AG I G PPP
Sbjct: 328 GNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTG-RQPPPLSSSRAVS 386
Query: 609 XPPXXPRGEPXRKXLXXXXXXXSPXXXKKTXPPPPXXXPXXAPPPPXXXXPXXXLXXXXX 788
PP P P R + P PP P P P P +
Sbjct: 387 NPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAA 446
Query: 789 LXXXPPPXXPRPXPPPXXPXPPPPPXRAXXXXXPXPS 899
P P P PP PP P P+
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPA 483
Score = 35.5 bits (78), Expect = 0.011
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = +1
Query: 712 RRASXXXPPPPPXXXXXXPXSXXXXXXPXXXXPXXPGPXPXXPXPXPPPXXXAPPPXXPX 891
R S PPP P P P P P P PP + PP P
Sbjct: 383 RAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP-PSLPPSAPPSLPPSAPPSLPM 441
Query: 892 XXPXXPXXXPSXP 930
P P PS P
Sbjct: 442 GAPAAPPLPPSAP 454
Score = 31.9 bits (69), Expect = 0.14
Identities = 27/118 (22%), Positives = 28/118 (23%), Gaps = 7/118 (5%)
Frame = +2
Query: 557 PXGGXXPPPPXQRGGXTXPPXXP-------AGXTPPXXXAXXXXXXXXXXXXXXXXXXXX 715
P G PPP + PP P A PP A
Sbjct: 370 PSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Query: 716 XXPXXXPPPPPXXXPXXPTXXXXXTXPXPXXXXXPARPPXXXXPXPPPXXXRXXPXXP 889
P PP P P P P PA PP PP P P
Sbjct: 430 SLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 30.3 bits (65), Expect = 0.41
Identities = 25/121 (20%), Positives = 29/121 (23%), Gaps = 5/121 (4%)
Frame = +3
Query: 576 PPPPXKGGDXRXPPXXPRGE-----PXRKXLXXXXXXXSPXXXKKTXPPPPXXXPXXAPP 740
PPPP + P P+G P + P + PP P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 741 PPXXXXPXXXLXXXXXLXXXPPPXXPRPXPPPXXPXPPPPPXRAXXXXXPXPSXXXXXXP 920
P PP P PP P PP P P P
Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Query: 921 L 923
L
Sbjct: 459 L 459
Score = 29.9 bits (64), Expect = 0.55
Identities = 17/58 (29%), Positives = 17/58 (29%), Gaps = 2/58 (3%)
Frame = +1
Query: 733 PPPPPXXXXXX--PXSXXXXXXPXXXXPXXPGPXPXXPXPXPPPXXXAPPPXXPXXXP 900
PPPPP P P P P PP APPP P P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.7 bits (81), Expect = 0.005
Identities = 20/60 (33%), Positives = 22/60 (36%)
Frame = +3
Query: 693 KTXPPPPXXXPXXAPPPPXXXXPXXXLXXXXXLXXXPPPXXPRPXPPPXXPXPPPPPXRA 872
K+ PPPP P P P + PPP P P P PPPPP A
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPA-----PIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 31.9 bits (69), Expect = 0.14
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 733 PPPPPXXXXXXPXSXXXXXXPXXXXPXXPGPXPXXPXPXPPPXXXAPPPXXP 888
PPPPP P P P GP P P P PPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPP--PAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.5 bits (63), Expect = 0.72
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 5/36 (13%)
Frame = +3
Query: 804 PPXXPRPXPPPXX-----PXPPPPPXRAXXXXXPXP 896
P P P PPP P PPPPP A P P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 817 PGPXPXXPXPXPPPXXXAPPPXXPXXXPXXPXXXPSXP 930
P P P P P P P PPP P P P
Sbjct: 744 PAPAPI-PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 789 LXXXPPPXXPRPXPPPXXPXPPPPPXRAXXXXXPXP 896
L PPP P P P P P P A P P
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP 763
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 801 PPPXXPRPXPPPXXPXPPPPPXRAXXXXXPXP 896
PPP P P P P P PPP P P
Sbjct: 735 PPPAVIVPTPAPA-PIPVPPPAPIMGGPPPPP 765
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 564 GGXXPPPPXKGGDXRXPPXXPRGEP 638
GG PPPP G PP P P
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 25.8 bits (54), Expect = 8.9
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -1
Query: 438 PPPPPPPXXGGXKXXXP 388
PPPPPPP G P
Sbjct: 762 PPPPPPPGVAGAGPPPP 778
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.7 bits (76), Expect = 0.019
Identities = 28/108 (25%), Positives = 31/108 (28%), Gaps = 1/108 (0%)
Frame = +3
Query: 579 PPPXKGGDXRXPPXXPRGEPX-RKXLXXXXXXXSPXXXKKTXPPPPXXXPXXAPPPPXXX 755
PP K P P G P K +P P P P PP
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 756 XPXXXLXXXXXLXXXPPPXXPRPXPPPXXPXPPPPPXRAXXXXXPXPS 899
P + + PPP P P P PP P A P PS
Sbjct: 1200 VPKPSVG----VPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS 1243
Score = 33.1 bits (72), Expect = 0.059
Identities = 20/82 (24%), Positives = 23/82 (28%)
Frame = +3
Query: 675 SPXXXKKTXPPPPXXXPXXAPPPPXXXXPXXXLXXXXXLXXXPPPXXPRPXPPPXXPXPP 854
+P K + PP P APP P + P P P P PP
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Query: 855 PPPXRAXXXXXPXPSXXXXXXP 920
P P PS P
Sbjct: 1161 VPKPSVAAPPVPAPSSGIPPVP 1182
Score = 31.1 bits (67), Expect = 0.24
Identities = 20/71 (28%), Positives = 21/71 (29%), Gaps = 1/71 (1%)
Frame = +1
Query: 721 SXXXPPPPPXXXXXXPX-SXXXXXXPXXXXPXXPGPXPXXPXPXPPPXXXAPPPXXPXXX 897
S P P P P S P P P P P P P APP P
Sbjct: 1080 SGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGA 1139
Query: 898 PXXPXXXPSXP 930
P P + P
Sbjct: 1140 PPVPKPSVAAP 1150
Score = 30.7 bits (66), Expect = 0.31
Identities = 17/65 (26%), Positives = 18/65 (27%)
Frame = +1
Query: 736 PPPPXXXXXXPXSXXXXXXPXXXXPXXPGPXPXXPXPXPPPXXXAPPPXXPXXXPXXPXX 915
P P P P P P P P P P APP P P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Query: 916 XPSXP 930
+ P
Sbjct: 1165 SVAAP 1169
Score = 30.3 bits (65), Expect = 0.41
Identities = 21/90 (23%), Positives = 25/90 (27%), Gaps = 1/90 (1%)
Frame = +3
Query: 675 SPXXXKKTXPPPPXXXPXXA-PPPPXXXXPXXXLXXXXXLXXXPPPXXPRPXPPPXXPXP 851
+P K + PP P PP P + P P P PP P
Sbjct: 1158 APPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Query: 852 PPPPXRAXXXXXPXPSXXXXXXPLXXXXRP 941
P P A P P+ P P
Sbjct: 1218 PVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 29.1 bits (62), Expect = 0.95
Identities = 20/82 (24%), Positives = 25/82 (30%)
Frame = +3
Query: 675 SPXXXKKTXPPPPXXXPXXAPPPPXXXXPXXXLXXXXXLXXXPPPXXPRPXPPPXXPXPP 854
+P K + PP P APP P + P P P P P PP
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPV---------PAPSGAPPVPKPSVAAPP 1170
Query: 855 PPPXRAXXXXXPXPSXXXXXXP 920
P + P P+ P
Sbjct: 1171 VPAPSSGIPPVPKPAAGVPPVP 1192
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/77 (24%), Positives = 21/77 (27%), Gaps = 3/77 (3%)
Frame = +3
Query: 678 PXXXKKTXPPPPXXXPXXAPPPPXXXXPXXXLXXXXXLXXXPPPXXPR---PXPPPXXPX 848
P + PP P PP P + PP P P P P
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAA 1101
Query: 849 PPPPPXRAXXXXXPXPS 899
PP P P PS
Sbjct: 1102 PPVPKPSVAVPPVPAPS 1118
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/69 (26%), Positives = 18/69 (26%), Gaps = 3/69 (4%)
Frame = +1
Query: 733 PPPPPXXXXXXPXSXXXXXXPXXXXPXX---PGPXPXXPXPXPPPXXXAPPPXXPXXXPX 903
PP P P P P P P P P P P PP P P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Query: 904 XPXXXPSXP 930
P P
Sbjct: 1219 VPTPSAGLP 1227
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 733 PPPPPXXXXXXPXSXXXXXXPXXXXPXXPGPXPXXPXPXPPPXXXAPPPXXP 888
PPP P P P P P P P P P APP P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP-PVPVPTAKAPPVPAP 1242
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/66 (24%), Positives = 17/66 (25%)
Frame = +1
Query: 733 PPPPPXXXXXXPXSXXXXXXPXXXXPXXPGPXPXXPXPXPPPXXXAPPPXXPXXXPXXPX 912
PP P P P P P P P P + P P P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSS 1071
Query: 913 XXPSXP 930
PS P
Sbjct: 1072 EIPSIP 1077
Score = 26.6 bits (56), Expect = 5.1
Identities = 17/66 (25%), Positives = 17/66 (25%), Gaps = 1/66 (1%)
Frame = +1
Query: 736 PPPPXXXXXXPXSXXXXXXPXXXXPXXPGPXPXXPXPXPPPXXXAPP-PXXPXXXPXXPX 912
P P P P P P P P P P APP P P P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK 1183
Query: 913 XXPSXP 930
P
Sbjct: 1184 PAAGVP 1189
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.5 bits (73), Expect = 0.044
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 801 PPPXXPRPXPPPXXPXPPPPP 863
PPP P PP P PPPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.8
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 702 PPPPXXXPXXAPPPP 746
PPPP P PPPP
Sbjct: 13 PPPPGFEPPSQPPPP 27
Score = 26.6 bits (56), Expect = 5.1
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 831 PPXXPXPPPPPXRAXXXXXPXP 896
PP P PPPPP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPP 26
Score = 26.6 bits (56), Expect = 5.1
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 829 PXXPXPXPPPXXXAPPPXXPXXXP 900
P P P PPP PP P P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 828 PPPXXPXPPPPPXRAXXXXXPXP 896
PP P PPPPP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 32.7 bits (71), Expect = 0.077
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = -3
Query: 871 ARXGGGGGXGXXGG-GXGRGXXGGGXWXSXXXXXSXXXGXXXXGGGGAXXGXXXGGGG 701
+R G GG G GG GRG GGG + G G GGA G GG
Sbjct: 7 SRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARG-GRGGRGGARGGRGGSSGG 63
Score = 28.3 bits (60), Expect = 1.7
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = -3
Query: 871 ARXGGGGGXGXXGG-GXGRGXXGGGXWXSXXXXXSXXXGXXXXGGGGAXXGXXXGGGG 701
+R G GG G GG G GRG GG G G GG+ G GG
Sbjct: 14 SRGGRGGFNGGRGGFGGGRGGARGGG-RGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = -1
Query: 888 GXXGXXRXXXGGGXGXXXXGGRAGXXXXXGXGXVXXXXXVGXXGXXXGGGGG 733
G R GGG G GGR G G G G G GG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 25.8 bits (54), Expect = 8.9
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = -3
Query: 922 RGXXXXXXXGXGXXXXXARXGGGGGXGXXGGGXGRGXXGGGXWXSXXXXXSXXXGXXXXG 743
RG G G GGG G GGG G G G G
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGA 67
Query: 742 GGGA 731
GGA
Sbjct: 68 KGGA 71
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.1 bits (67), Expect = 0.24
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = -3
Query: 868 RXGGGGGXGXXGGGXGRGXXGGGXWXSXXXXXSXXXGXXXXGGGGAXXGXXXGGGG 701
R GGG G GGG G G G + GG G G GG G
Sbjct: 183 RGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPG 238
Score = 31.1 bits (67), Expect = 0.24
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -3
Query: 859 GGGGXGXXGGGXGRGXXGGGXWXSXXXXXSXXXGXXXXGGGGAXXGXXXGGGG 701
G GG G GG G G GG G GGG G GG G
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG 255
Score = 30.3 bits (65), Expect = 0.41
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = -3
Query: 862 GGGGGXGXXGGGXGRGXXGGGXWXSXXXXXSXXXGXXXXGGG-GAXXGXXXGGGG 701
GG GG G GG G G G + G GGG G G G GG
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG 242
Score = 29.9 bits (64), Expect = 0.55
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 4/69 (5%)
Frame = -3
Query: 895 GXGXXXXXARXGGGGGXGXXGGGX----GRGXXGGGXWXSXXXXXSXXXGXXXXGGGGAX 728
G G GG GG G GG G G GGG G GGG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 727 XGXXXGGGG 701
G GG G
Sbjct: 254 FGGGPGGFG 262
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 929 GXEGXXXGXXGXXXGXXGGGAXXXGGGXGXGXXGXGPGXXGXXXXG 792
G G G G GGG GG G G G GPG G G
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGG--GLGGFGGGPGGFGGGPGG 267
Score = 27.9 bits (59), Expect = 2.2
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 3/62 (4%)
Frame = -2
Query: 908 GXXGXXXGXXGGGAXXXG-GGXGXGXXGX--GPGXXGXXXXGKXXXXXEXGXXXXXXGGG 738
G G G G G G GG G G G GPG G G G GGG
Sbjct: 205 GGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Query: 737 GG 732
G
Sbjct: 265 PG 266
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -2
Query: 473 GGGGGFXXXXXXPPPPXPPGXXAXKXXAPGGXFXXFXGGFXGGXXXXXG 327
GG GGF PPP P G G GGF GG G
Sbjct: 188 GGFGGFGGGSGGPPP-GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEG 235
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 929 GXEGXXXGXXGXXXGXXGGGAXXXGGGXGXGXXGXG 822
G G G G G GGG GGG G G G G
Sbjct: 238 GGFGGGPGGFGGGLGGFGGGPGGFGGGPG-GHGGPG 272
Score = 26.2 bits (55), Expect = 6.7
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
Frame = -3
Query: 862 GGGGGXGXXGGGX--GRGXXGGGXWXSXXXXXSXXXGXXXXGGGGAXXG 722
GG GG G GG G G GGG G GGG G
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.24
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +1
Query: 736 PPPPXXXXXXPXSXXXXXXPXXXXPXXPGPXPXXPXPXPPPXXXAPPPXXPXXXPXXPXX 915
PP P P S P P P P PP PPP P P
Sbjct: 130 PPTPQSELRPPTSAPPRPS---IPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPS 186
Query: 916 XPSXP 930
PS P
Sbjct: 187 APSLP 191
Score = 30.7 bits (66), Expect = 0.31
Identities = 23/92 (25%), Positives = 27/92 (29%)
Frame = +3
Query: 576 PPPPXKGGDXRXPPXXPRGEPXRKXLXXXXXXXSPXXXKKTXPPPPXXXPXXAPPPPXXX 755
P PP + R P P R + +P K P P P P P
Sbjct: 128 PAPPTPQSELRPPT----SAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 756 XPXXXLXXXXXLXXXPPPXXPRPXPPPXXPXP 851
P L PP P+ PPP P
Sbjct: 184 PPSAP-----SLPSAVPPMPPKVPPPPLSQAP 210
Score = 27.9 bits (59), Expect = 2.2
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 5/58 (8%)
Frame = +3
Query: 705 PPPXXXPXXAPPPPXXXXPXXXLXXXXXLXXXP---PPXXPR--PXPPPXXPXPPPPP 863
PPP P APP P P P PP P PP P PPPP
Sbjct: 150 PPPS--PASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 25.8 bits (54), Expect = 8.9
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 801 PPPXXPRPXPPPXXPXPP 854
PPP P P P P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.7 bits (66), Expect = 0.31
Identities = 16/55 (29%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = +3
Query: 702 PPPPXXXPXXAPPPPXXXXPXXXLXXXXXLXXX-PPPXXPRPXPPPXXPXPPPPP 863
PPPP P P + PP P+ P P PPPPP
Sbjct: 190 PPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPP 244
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 30.7 bits (66), Expect = 0.31
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = -3
Query: 862 GGGGGXGXXGGGXGRGXXGGG 800
GG GG G GG GRG GGG
Sbjct: 451 GGRGGFGGRGGFGGRGGFGGG 471
Score = 29.1 bits (62), Expect = 0.95
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3
Query: 862 GGGGGXGXXGGGXGRGXXG 806
GG GG G GGG GRG G
Sbjct: 460 GGFGGRGGFGGGRGRGRGG 478
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 859 GGGGXGXXGGGXGRGXXGG 803
GGG G GG GRG GG
Sbjct: 446 GGGSRGGRGGFGGRGGFGG 464
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.3 bits (65), Expect = 0.41
Identities = 21/72 (29%), Positives = 24/72 (33%)
Frame = +3
Query: 675 SPXXXKKTXPPPPXXXPXXAPPPPXXXXPXXXLXXXXXLXXXPPPXXPRPXPPPXXPXPP 854
+P ++ PP P PPPP P PP P P PP P PP
Sbjct: 1689 TPPVRPQSAAPPQMSAP--TPPPPPMSVPP------------PPSAPPMPAGPPSAPPPP 1734
Query: 855 PPPXRAXXXXXP 890
P A P
Sbjct: 1735 LPASSAPSVPNP 1746
Score = 30.3 bits (65), Expect = 0.41
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 823 PXPXXPXPXPPPXXXAPPPXXPXXXPXXPXXXPSXP 930
P P P PPP PPP P P P P P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAP-PMPAGPPSAPPPP 1734
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 817 PGPXPXXPXPXPPPXXXAPPPXXPXXXPXXPXXXPSXP 930
P P P P PPP P P P P P S P
Sbjct: 1705 PTPPPP-PMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 801 PPPXXPRPXPPPXXPXPPPPPXRAXXXXXPXPSXXXXXXP 920
PPP PPP P P P A P S P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +3
Query: 735 PPPPXXXXPXXXLXXXXXLXXXPPPXXPRPXPPPXXPXPPP 857
PP P P L L P P P P PP P P
Sbjct: 107 PPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
>SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 807 PXXPRPXPPPXXPXPPPPPXRAXXXXXPXPS 899
P PR P P PP PP R P S
Sbjct: 162 PSKPRKKVPVSHPLPPTPPSREEHVSVPRES 192
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Frame = +3
Query: 807 PXXPRPXPPPXXP-XPPPPPXRA 872
P P P P P PPPPP R+
Sbjct: 729 PAPPTPAPTPAVKHHPPPPPVRS 751
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 862 GGGGGXGXXGGGXGRGXXGGG 800
G G G GGG G G GGG
Sbjct: 75 GLNGQPGGPGGGPGEGFPGGG 95
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,076,589
Number of Sequences: 5004
Number of extensions: 35904
Number of successful extensions: 558
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 481321826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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