Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_J21
         (863 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0460 - 8654283-8654302,8654669-8654847,8654940-8655125,865...    31   0.90 
09_02_0096 - 4221935-4222231                                           28   8.4  
01_06_0184 - 27282021-27282313,27284238-27285374,27285524-27285617     28   8.4  

>03_02_0460 -
           8654283-8654302,8654669-8654847,8654940-8655125,
           8655626-8655781,8656223-8656431,8657254-8657358
          Length = 284

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +2

Query: 338 IRRIKDILFSALAFPLSVFVGITFWGIYAIDRELILPRSLDP--YFPTWLNHVMHTNIMA 511
           +R+ K + FS   + L+ +  +  W +  I +E   P SLD   YF  W N  M +++M 
Sbjct: 54  VRQAKIVKFSESIWKLTYYGSVQAWVLLIIKQE---PWSLDTMQYFEGWPNQYMTSSLML 110

Query: 512 FIL 520
           F +
Sbjct: 111 FYM 113


>09_02_0096 - 4221935-4222231
          Length = 98

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +2

Query: 335 LIRRIKDILFSALAFPLSVFVGITFWGIYAIDRELILPRSLDPYFPTWLN 484
           LIR +  I+ +A++F L +   +TFW I  I  + +     DPY  T LN
Sbjct: 6   LIRNVVGIVGNAISFGLFLSPVLTFWRI--IKEKDMKYFKADPYLATLLN 53


>01_06_0184 - 27282021-27282313,27284238-27285374,27285524-27285617
          Length = 507

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 134 GAIHFGYGCYYDQVHVNVPSTSAIVTP 214
           G + +G+G    QVHV+V S++A V P
Sbjct: 341 GLLQYGFGITTPQVHVDVTSSAAGVLP 367


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,175,543
Number of Sequences: 37544
Number of extensions: 446735
Number of successful extensions: 931
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)