Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_J19
(921 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 36 0.16
BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein. 36 0.16
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 36 0.16
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 36 0.16
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 36 0.16
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 36 0.27
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 36 0.27
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 36 0.27
BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor, argini... 34 0.63
BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor, argini... 34 0.63
BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor, argini... 34 0.63
BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor, argini... 34 0.63
AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein pr... 34 0.63
AL117417-1|CAB55911.1| 667|Homo sapiens hypothetical protein pr... 34 0.63
AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR pr... 34 0.63
AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein. 34 0.63
AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein. 34 0.63
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 34 0.83
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 34 0.83
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 33 1.5
AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant pr... 33 1.5
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 32 3.4
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 31 4.5
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 31 4.5
BC111697-1|AAI11698.1| 983|Homo sapiens RBM26 protein protein. 31 4.5
BC041655-1|AAH41655.1| 980|Homo sapiens RNA binding motif prote... 31 4.5
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 31 4.5
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 31 4.5
AL159974-2|CAI12923.3| 980|Homo sapiens RNA binding motif prote... 31 4.5
AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif prote... 31 4.5
AL139006-2|CAI95137.2| 980|Homo sapiens RNA binding motif prote... 31 4.5
AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif prote... 31 4.5
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 31 4.5
AK027456-1|BAB55125.1| 680|Homo sapiens protein ( Homo sapiens ... 31 4.5
BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein. 31 5.9
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 31 5.9
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 31 7.8
EF695441-1|ABS01479.1| 231|Homo sapiens extraembryonic spermato... 31 7.8
EF695423-1|ABS01461.1| 231|Homo sapiens extraembryonic spermato... 31 7.8
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 31 7.8
BC067364-1|AAH67364.1| 871|Homo sapiens PRP40 pre-mRNA processi... 31 7.8
BC053599-1|AAH53599.1| 406|Homo sapiens ESX homeobox 1 protein. 31 7.8
BC050398-1|AAH50398.1| 788|Homo sapiens PRPF40B protein protein. 31 7.8
BC042633-1|AAH42633.1| 406|Homo sapiens ESX homeobox 1 protein. 31 7.8
AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein. 31 7.8
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 31 7.8
AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein. 31 7.8
AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein. 31 7.8
AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein. 31 7.8
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 31 7.8
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 31 7.8
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 31 7.8
AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein. 31 7.8
AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collage... 31 7.8
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 36.3 bits (80), Expect = 0.16
Identities = 26/85 (30%), Positives = 28/85 (32%)
Frame = +3
Query: 630 PFXXFXPXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPX 809
P P GPPP PP G PPG PP + P PP P P P
Sbjct: 453 PLPRLLPPGPPPGR------PPGPPPGP-PPGLPPGPPPRGPPPRLPPPAPPGIPPPRPG 505
Query: 810 XQKXXXPPFFPXXGXXXGXFF*KXP 884
+ PP P G F P
Sbjct: 506 MMR---PPLVPPLGPAPPGLFPPAP 527
Score = 32.3 bits (70), Expect = 2.5
Identities = 27/91 (29%), Positives = 28/91 (30%), Gaps = 2/91 (2%)
Frame = +3
Query: 648 PXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPL--FPXPXPXXQKX 821
P GPPP PP PPG F P P PL P P +
Sbjct: 412 PLGPPPAPPLRPPGPPT----GLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRP 467
Query: 822 XXPPFFPXXGXXXGXFF*KXPXXXXFPPPPG 914
PP P G G P P PPG
Sbjct: 468 PGPPPGPPPGLPPGPPPRGPPPRLPPPAPPG 498
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 659 PPPXXXXKKFPPXFXRGGXPP-XGXXKXPXVSPPXKXPPXXXPP 787
PPP + PP G PP G + P V P PP PP
Sbjct: 482 PPPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPP 525
>BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein.
Length = 400
Score = 36.3 bits (80), Expect = 0.16
Identities = 26/85 (30%), Positives = 28/85 (32%)
Frame = +3
Query: 630 PFXXFXPXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPX 809
P P GPPP PP G PPG PP + P PP P P P
Sbjct: 212 PLPRLLPPGPPPGR------PPGPPPGP-PPGLPPGPPPRGPPPRLPPPAPPGIPPPRPG 264
Query: 810 XQKXXXPPFFPXXGXXXGXFF*KXP 884
+ PP P G F P
Sbjct: 265 MMR---PPLVPPLGPAPPGLFPPAP 286
Score = 32.3 bits (70), Expect = 2.5
Identities = 27/91 (29%), Positives = 28/91 (30%), Gaps = 2/91 (2%)
Frame = +3
Query: 648 PXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPL--FPXPXPXXQKX 821
P GPPP PP PPG F P P PL P P +
Sbjct: 171 PLGPPPAPPLRPPGPPT----GLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRP 226
Query: 822 XXPPFFPXXGXXXGXFF*KXPXXXXFPPPPG 914
PP P G G P P PPG
Sbjct: 227 PGPPPGPPPGLPPGPPPRGPPPRLPPPAPPG 257
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 659 PPPXXXXKKFPPXFXRGGXPP-XGXXKXPXVSPPXKXPPXXXPP 787
PPP + PP G PP G + P V P PP PP
Sbjct: 241 PPPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPP 284
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 36.3 bits (80), Expect = 0.16
Identities = 26/85 (30%), Positives = 28/85 (32%)
Frame = +3
Query: 630 PFXXFXPXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPX 809
P P GPPP PP G PPG PP + P PP P P P
Sbjct: 453 PLPRLLPPGPPPGR------PPGPPPGP-PPGLPPGPPPRGPPPRLPPPAPPGIPPPRPG 505
Query: 810 XQKXXXPPFFPXXGXXXGXFF*KXP 884
+ PP P G F P
Sbjct: 506 MMR---PPLVPPLGPAPPGLFPPAP 527
Score = 32.3 bits (70), Expect = 2.5
Identities = 27/91 (29%), Positives = 28/91 (30%), Gaps = 2/91 (2%)
Frame = +3
Query: 648 PXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPL--FPXPXPXXQKX 821
P GPPP PP PPG F P P PL P P +
Sbjct: 412 PLGPPPAPPLRPPGPPT----GLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRP 467
Query: 822 XXPPFFPXXGXXXGXFF*KXPXXXXFPPPPG 914
PP P G G P P PPG
Sbjct: 468 PGPPPGPPPGLPPGPPPRGPPPRLPPPAPPG 498
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 659 PPPXXXXKKFPPXFXRGGXPP-XGXXKXPXVSPPXKXPPXXXPP 787
PPP + PP G PP G + P V P PP PP
Sbjct: 482 PPPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPP 525
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 36.3 bits (80), Expect = 0.16
Identities = 26/85 (30%), Positives = 28/85 (32%)
Frame = +3
Query: 630 PFXXFXPXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPX 809
P P GPPP PP G PPG PP + P PP P P P
Sbjct: 453 PLPRLLPPGPPPGR------PPGPPPGP-PPGLPPGPPPRGPPPRLPPPAPPGIPPPRPG 505
Query: 810 XQKXXXPPFFPXXGXXXGXFF*KXP 884
+ PP P G F P
Sbjct: 506 MMR---PPLVPPLGPAPPGLFPPAP 527
Score = 32.3 bits (70), Expect = 2.5
Identities = 27/91 (29%), Positives = 28/91 (30%), Gaps = 2/91 (2%)
Frame = +3
Query: 648 PXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPL--FPXPXPXXQKX 821
P GPPP PP PPG F P P PL P P +
Sbjct: 412 PLGPPPAPPLRPPGPPT----GLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRP 467
Query: 822 XXPPFFPXXGXXXGXFF*KXPXXXXFPPPPG 914
PP P G G P P PPG
Sbjct: 468 PGPPPGPPPGLPPGPPPRGPPPRLPPPAPPG 498
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 659 PPPXXXXKKFPPXFXRGGXPP-XGXXKXPXVSPPXKXPPXXXPP 787
PPP + PP G PP G + P V P PP PP
Sbjct: 482 PPPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPP 525
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 36.3 bits (80), Expect = 0.16
Identities = 26/85 (30%), Positives = 28/85 (32%)
Frame = +3
Query: 630 PFXXFXPXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPX 809
P P GPPP PP G PPG PP + P PP P P P
Sbjct: 453 PLPRLLPPGPPPGR------PPGPPPGP-PPGLPPGPPPRGPPPRLPPPAPPGIPPPRPG 505
Query: 810 XQKXXXPPFFPXXGXXXGXFF*KXP 884
+ PP P G F P
Sbjct: 506 MMR---PPLVPPLGPAPPGLFPPAP 527
Score = 32.3 bits (70), Expect = 2.5
Identities = 27/91 (29%), Positives = 28/91 (30%), Gaps = 2/91 (2%)
Frame = +3
Query: 648 PXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPL--FPXPXPXXQKX 821
P GPPP PP PPG F P P PL P P +
Sbjct: 412 PLGPPPAPPLRPPGPPT----GLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRP 467
Query: 822 XXPPFFPXXGXXXGXFF*KXPXXXXFPPPPG 914
PP P G G P P PPG
Sbjct: 468 PGPPPGPPPGLPPGPPPRGPPPRLPPPAPPG 498
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 659 PPPXXXXKKFPPXFXRGGXPP-XGXXKXPXVSPPXKXPPXXXPP 787
PPP + PP G PP G + P V P PP PP
Sbjct: 482 PPPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPP 525
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 35.5 bits (78), Expect = 0.27
Identities = 25/86 (29%), Positives = 27/86 (31%)
Frame = +2
Query: 656 PPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSPXXXXFXEXXFXPX 835
P PP + PP R PP G + P PP PP PPF P P
Sbjct: 32 PAPPPNAVMRGPPPLMRP-PPPFGMMRGP---PPPPRPPFGRPPFDPNMPPMPPPGGIPP 87
Query: 836 FPXXGXXXXGXFLKXPPXXXFSPPXG 913
P PP PP G
Sbjct: 88 -PMGPPHLQRPPFMPPPMSSMPPPPG 112
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 35.5 bits (78), Expect = 0.27
Identities = 25/86 (29%), Positives = 27/86 (31%)
Frame = +2
Query: 656 PPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSPXXXXFXEXXFXPX 835
P PP + PP R PP G + P PP PP PPF P P
Sbjct: 32 PAPPPNAVMRGPPPLMRP-PPPFGMMRGP---PPPPRPPFGRPPFDPNMPPMPPPGGIPP 87
Query: 836 FPXXGXXXXGXFLKXPPXXXFSPPXG 913
P PP PP G
Sbjct: 88 -PMGPPHLQRPPFMPPPMSSMPPPPG 112
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 35.5 bits (78), Expect = 0.27
Identities = 25/86 (29%), Positives = 27/86 (31%)
Frame = +2
Query: 656 PPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSPXXXXFXEXXFXPX 835
P PP + PP R PP G + P PP PP PPF P P
Sbjct: 36 PAPPPNAVMRGPPPLMRP-PPPFGMMRGP---PPPPRPPFGRPPFDPNMPPMPPPGGIPP 91
Query: 836 FPXXGXXXXGXFLKXPPXXXFSPPXG 913
P PP PP G
Sbjct: 92 -PMGPPHLQRPPFMPPPMSSMPPPPG 116
>BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 34.3 bits (75), Expect = 0.63
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +2
Query: 656 PPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFS 793
PPPP F P G P G P ++PP PP PP S
Sbjct: 719 PPPPPFLRPGFNPMHLPPGFLPPGPP--PPITPPVSIPPPHTPPIS 762
Score = 30.7 bits (66), Expect = 7.8
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +2
Query: 653 RPPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSP 796
+P PP + P G PP G P V PP PP P F+P
Sbjct: 686 QPGPPVVGALQPPAFTPPLGIPPPGFG--PGVPPPPPPPPFLRPGFNP 731
>BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 34.3 bits (75), Expect = 0.63
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +2
Query: 656 PPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFS 793
PPPP F P G P G P ++PP PP PP S
Sbjct: 719 PPPPPFLRPGFNPMHLPPGFLPPGPP--PPITPPVSIPPPHTPPIS 762
Score = 30.7 bits (66), Expect = 7.8
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +2
Query: 653 RPPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSP 796
+P PP + P G PP G P V PP PP P F+P
Sbjct: 686 QPGPPVVGALQPPAFTPPLGIPPPGFG--PGVPPPPPPPPFLRPGFNP 731
>BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1146
Score = 34.3 bits (75), Expect = 0.63
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +2
Query: 656 PPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFS 793
PPPP F P G P G P ++PP PP PP S
Sbjct: 719 PPPPPFLRPGFNPMHLPPGFLPPGPP--PPITPPVSIPPPHTPPIS 762
Score = 30.7 bits (66), Expect = 7.8
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +2
Query: 653 RPPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSP 796
+P PP + P G PP G P V PP PP P F+P
Sbjct: 686 QPGPPVVGALQPPAFTPPLGIPPPGFG--PGVPPPPPPPPFLRPGFNP 731
>BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 34.3 bits (75), Expect = 0.63
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +2
Query: 656 PPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFS 793
PPPP F P G P G P ++PP PP PP S
Sbjct: 719 PPPPPFLRPGFNPMHLPPGFLPPGPP--PPITPPVSIPPPHTPPIS 762
Score = 30.7 bits (66), Expect = 7.8
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +2
Query: 653 RPPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSP 796
+P PP + P G PP G P V PP PP P F+P
Sbjct: 686 QPGPPVVGALQPPAFTPPLGIPPPGFG--PGVPPPPPPPPFLRPGFNP 731
>AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein
protein.
Length = 1009
Score = 34.3 bits (75), Expect = 0.63
Identities = 18/62 (29%), Positives = 20/62 (32%)
Frame = +3
Query: 657 PPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPXXQKXXXPPF 836
PPP S + P G P PP P PP P P P + PP
Sbjct: 445 PPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPPPLPGPAAETVPAPPL 504
Query: 837 FP 842
P
Sbjct: 505 AP 506
>AL117417-1|CAB55911.1| 667|Homo sapiens hypothetical protein
protein.
Length = 667
Score = 34.3 bits (75), Expect = 0.63
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +2
Query: 656 PPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFS 793
PPPP F P G P G P ++PP PP PP S
Sbjct: 530 PPPPPFLRPGFNPMHLPPGFLPPGPP--PPITPPVSIPPPHTPPIS 573
Score = 30.7 bits (66), Expect = 7.8
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +2
Query: 653 RPPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSP 796
+P PP + P G PP G P V PP PP P F+P
Sbjct: 497 QPGPPVVGALQPPAFTPPLGIPPPGFG--PGVPPPPPPPPFLRPGFNP 542
>AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR
protein rA4 protein.
Length = 1157
Score = 34.3 bits (75), Expect = 0.63
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +2
Query: 656 PPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFS 793
PPPP F P G P G P ++PP PP PP S
Sbjct: 729 PPPPPFLRPGFNPMHLPPGFLPPGPP--PPITPPVSIPPPHTPPIS 772
Score = 30.7 bits (66), Expect = 7.8
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +2
Query: 653 RPPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSP 796
+P PP + P G PP G P V PP PP P F+P
Sbjct: 696 QPGPPVVGALQPPAFTPPLGIPPPGFG--PGVPPPPPPPPFLRPGFNP 741
>AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.
Length = 1112
Score = 34.3 bits (75), Expect = 0.63
Identities = 18/62 (29%), Positives = 20/62 (32%)
Frame = +3
Query: 657 PPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPXXQKXXXPPF 836
PPP S + P G P PP P PP P P P + PP
Sbjct: 548 PPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPPPLPGPASETVPAPPL 607
Query: 837 FP 842
P
Sbjct: 608 AP 609
>AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein.
Length = 929
Score = 34.3 bits (75), Expect = 0.63
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +2
Query: 656 PPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFS 793
PPPP F P G P G P ++PP PP PP S
Sbjct: 523 PPPPPFLRPGFNPMHLPPGFLPPGPP--PPITPPVSIPPPHTPPIS 566
Score = 30.7 bits (66), Expect = 7.8
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +2
Query: 653 RPPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSP 796
+P PP + P G PP G P V PP PP P F+P
Sbjct: 490 QPGPPVVGALQPPAFTPPLGIPPPGFG--PGVPPPPPPPPFLRPGFNP 535
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 33.9 bits (74), Expect = 0.83
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +3
Query: 648 PXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPXXQKXXX 827
P PPP S PP G PP PP P P P P
Sbjct: 287 PPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPP 346
Query: 828 PPFFP 842
PP P
Sbjct: 347 PPALP 351
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 33.9 bits (74), Expect = 0.83
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +3
Query: 648 PXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPXXQKXXX 827
P PPP S PP G PP PP P P P P
Sbjct: 287 PPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPP 346
Query: 828 PPFFP 842
PP P
Sbjct: 347 PPALP 351
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 33.1 bits (72), Expect = 1.5
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +3
Query: 648 PXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPXXQKXXX 827
P PPP S PP G PP PP P P P P
Sbjct: 287 PPPPPPPPHSSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVEVPPPPPNRMYPPP 346
Query: 828 PPFFP 842
PP P
Sbjct: 347 PPALP 351
>AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant
protein.
Length = 410
Score = 33.1 bits (72), Expect = 1.5
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +2
Query: 656 PPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSP 796
PPPP + PP PP G P PP PP PP P
Sbjct: 348 PPPPP----RLPPTHAVPPHPPPGLGLPPASYPPPAVPPGGQPPVPP 390
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +3
Query: 648 PXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPXXQKXXX 827
P PPP S PP G PP PP P P P P
Sbjct: 287 PPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPP 346
Query: 828 PP 833
PP
Sbjct: 347 PP 348
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 31.5 bits (68), Expect = 4.5
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = +3
Query: 648 PXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPXXQKXXX 827
P G PP PP G PPG PP P PP P P
Sbjct: 283 PFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPP---PGPFPPRPPGPLGPPLTLAP 339
Query: 828 PPFFP 842
PP P
Sbjct: 340 PPHLP 344
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 31.5 bits (68), Expect = 4.5
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = +3
Query: 648 PXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPXXQKXXX 827
P G PP PP G PPG PP P PP P P
Sbjct: 283 PFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPP---PGPFPPRPPGPLGPPLTLAP 339
Query: 828 PPFFP 842
PP P
Sbjct: 340 PPHLP 344
>BC111697-1|AAI11698.1| 983|Homo sapiens RBM26 protein protein.
Length = 983
Score = 31.5 bits (68), Expect = 4.5
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +2
Query: 656 PPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSP 796
PPPP PP R PP G P PP PP PP P
Sbjct: 347 PPPPPILTP--PPVNLRPPVPPPGPL--PPSLPPVTGPPPPLPPLQP 389
>BC041655-1|AAH41655.1| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 31.5 bits (68), Expect = 4.5
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +2
Query: 656 PPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSP 796
PPPP PP R PP G P PP PP PP P
Sbjct: 347 PPPPPILTP--PPVNLRPPVPPPGPL--PPSLPPVTGPPPPLPPLQP 389
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 31.5 bits (68), Expect = 4.5
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = +3
Query: 648 PXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPXXQKXXX 827
P G PP PP G PPG PP P PP P P
Sbjct: 210 PFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPP---PGPFPPRPPGPLGPPLTLAP 266
Query: 828 PPFFP 842
PP P
Sbjct: 267 PPHLP 271
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 31.5 bits (68), Expect = 4.5
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = +3
Query: 648 PXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPXXQKXXX 827
P G PP PP G PPG PP P PP P P
Sbjct: 320 PFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPP---PGPFPPRPPGPLGPPLTLAP 376
Query: 828 PPFFP 842
PP P
Sbjct: 377 PPHLP 381
>AL159974-2|CAI12923.3| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 31.5 bits (68), Expect = 4.5
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +2
Query: 656 PPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSP 796
PPPP PP R PP G P PP PP PP P
Sbjct: 347 PPPPPILTP--PPVNLRPPVPPPGPL--PPSLPPVTGPPPPLPPLQP 389
>AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif protein
26 protein.
Length = 1008
Score = 31.5 bits (68), Expect = 4.5
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +2
Query: 656 PPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSP 796
PPPP PP R PP G P PP PP PP P
Sbjct: 348 PPPPPILTP--PPVNLRPPVPPPGPL--PPSLPPVTGPPPPLPPLQP 390
>AL139006-2|CAI95137.2| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 31.5 bits (68), Expect = 4.5
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +2
Query: 656 PPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSP 796
PPPP PP R PP G P PP PP PP P
Sbjct: 347 PPPPPILTP--PPVNLRPPVPPPGPL--PPSLPPVTGPPPPLPPLQP 389
>AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif protein
26 protein.
Length = 1008
Score = 31.5 bits (68), Expect = 4.5
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +2
Query: 656 PPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSP 796
PPPP PP R PP G P PP PP PP P
Sbjct: 348 PPPPPILTP--PPVNLRPPVPPPGPL--PPSLPPVTGPPPPLPPLQP 390
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 31.5 bits (68), Expect = 4.5
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = +3
Query: 648 PXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPXXQKXXX 827
P G PP PP G PPG PP P PP P P
Sbjct: 283 PFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPP---PGPFPPRPPGPLGPPLTLAP 339
Query: 828 PPFFP 842
PP P
Sbjct: 340 PPHLP 344
>AK027456-1|BAB55125.1| 680|Homo sapiens protein ( Homo sapiens
cDNA FLJ14550 fis, clone NT2RM2001696. ).
Length = 680
Score = 31.5 bits (68), Expect = 4.5
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +2
Query: 656 PPPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSP 796
PPPP PP R PP G P PP PP PP P
Sbjct: 44 PPPPPILTP--PPVNLRPPVPPPGPL--PPSLPPVTGPPPPLPPLQP 86
>BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein.
Length = 600
Score = 31.1 bits (67), Expect = 5.9
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +3
Query: 648 PXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXP 806
P P P + PP PP T PP P PP P P P
Sbjct: 98 PPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPP 150
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 31.1 bits (67), Expect = 5.9
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +3
Query: 648 PXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXP 806
P P P + PP PP T PP P PP P P P
Sbjct: 643 PPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPP 695
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 30.7 bits (66), Expect = 7.8
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = -3
Query: 547 PFTPXGGXXTXSPXPKPGXXGFXGGERXXGPKXKXXXPGGXG--XFXXXKXXPXXP 386
P P G P KPG G GG+ GP + G G F K P P
Sbjct: 884 PTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPP 939
>EF695441-1|ABS01479.1| 231|Homo sapiens extraembryonic
spermatogenesis homeobox 1-like protein protein.
Length = 231
Score = 30.7 bits (66), Expect = 7.8
Identities = 20/74 (27%), Positives = 22/74 (29%), Gaps = 2/74 (2%)
Frame = +3
Query: 627 APFXXFXPXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXP-- 800
AP + P P P PP PPG PP PP+ P P
Sbjct: 117 APVPPWPPMAPVPTGPPMARVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPG 176
Query: 801 XPXXQKXXXPPFFP 842
P PP P
Sbjct: 177 PPMAPLPPGPPMAP 190
>EF695423-1|ABS01461.1| 231|Homo sapiens extraembryonic
spermatogenesis homeobox 1-like protein protein.
Length = 231
Score = 30.7 bits (66), Expect = 7.8
Identities = 20/74 (27%), Positives = 22/74 (29%), Gaps = 2/74 (2%)
Frame = +3
Query: 627 APFXXFXPXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXP-- 800
AP + P P P PP PPG PP PP+ P P
Sbjct: 117 APVPPWPPMAPVPTGPPMARVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPG 176
Query: 801 XPXXQKXXXPPFFP 842
P PP P
Sbjct: 177 PPMAPLPPGPPMAP 190
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 30.7 bits (66), Expect = 7.8
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = -3
Query: 547 PFTPXGGXXTXSPXPKPGXXGFXGGERXXGPKXKXXXPGGXG--XFXXXKXXPXXP 386
P P G P KPG G GG+ GP + G G F K P P
Sbjct: 768 PTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPP 823
>BC067364-1|AAH67364.1| 871|Homo sapiens PRP40 pre-mRNA processing
factor 40 homolog B (S. cerevisiae) protein.
Length = 871
Score = 30.7 bits (66), Expect = 7.8
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +2
Query: 659 PPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSP 796
PPP PP F G PP + P PP PP PP P
Sbjct: 3 PPPFMPPPGIPPPFPPMGLPPMS--QRPPAIPP--MPPGILPPMLP 44
>BC053599-1|AAH53599.1| 406|Homo sapiens ESX homeobox 1 protein.
Length = 406
Score = 30.7 bits (66), Expect = 7.8
Identities = 20/74 (27%), Positives = 22/74 (29%), Gaps = 2/74 (2%)
Frame = +3
Query: 627 APFXXFXPXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXP-- 800
AP + P P P PP PPG PP PP+ P P
Sbjct: 301 APVPPWPPMAPVPTGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPG 360
Query: 801 XPXXQKXXXPPFFP 842
P PP P
Sbjct: 361 PPMAPLPPGPPMAP 374
>BC050398-1|AAH50398.1| 788|Homo sapiens PRPF40B protein protein.
Length = 788
Score = 30.7 bits (66), Expect = 7.8
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +2
Query: 659 PPPXXXXKKFPPXFXRGGXPPXGXXKXPXVSPPXKXPPXXXPPFSP 796
PPP PP F G PP + P PP PP PP P
Sbjct: 3 PPPFMPPPGIPPPFPPMGLPPMS--QRPPAIPP--MPPGILPPMLP 44
>BC042633-1|AAH42633.1| 406|Homo sapiens ESX homeobox 1 protein.
Length = 406
Score = 30.7 bits (66), Expect = 7.8
Identities = 20/74 (27%), Positives = 22/74 (29%), Gaps = 2/74 (2%)
Frame = +3
Query: 627 APFXXFXPXGPPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXP-- 800
AP + P P P PP PPG PP PP+ P P
Sbjct: 301 APVPPWPPMAPVPTGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPG 360
Query: 801 XPXXQKXXXPPFFP 842
P PP P
Sbjct: 361 PPMAPLPPGPPMAP 374
>AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 30.7 bits (66), Expect = 7.8
Identities = 24/85 (28%), Positives = 24/85 (28%)
Frame = +3
Query: 657 PPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPXXQKXXXPPF 836
PPP PP G PP PP P PP P P PP
Sbjct: 1330 PPPLPGVGIPPPPPLPGAGIPPPPPLPGMGI-PPAPAPPLPPPGTGIPPPPLLPVSGPPL 1388
Query: 837 FPXXGXXXGXFF*KXPXXXXFPPPP 911
P G P F PPP
Sbjct: 1389 LPQVGSST----LPTPQVCGFLPPP 1409
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 30.7 bits (66), Expect = 7.8
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = -3
Query: 547 PFTPXGGXXTXSPXPKPGXXGFXGGERXXGPKXKXXXPGGXG--XFXXXKXXPXXP 386
P P G P KPG G GG+ GP + G G F K P P
Sbjct: 884 PTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPP 939
>AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 30.7 bits (66), Expect = 7.8
Identities = 24/85 (28%), Positives = 24/85 (28%)
Frame = +3
Query: 657 PPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPXXQKXXXPPF 836
PPP PP G PP PP P PP P P PP
Sbjct: 1330 PPPLPGVGIPPPPPLPGAGIPPPPPLPGMGI-PPAPAPPLPPPGTGIPPPPLLPVSGPPL 1388
Query: 837 FPXXGXXXGXFF*KXPXXXXFPPPP 911
P G P F PPP
Sbjct: 1389 LPQVGSST----LPTPQVCGFLPPP 1409
>AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 30.7 bits (66), Expect = 7.8
Identities = 24/85 (28%), Positives = 24/85 (28%)
Frame = +3
Query: 657 PPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPXXQKXXXPPF 836
PPP PP G PP PP P PP P P PP
Sbjct: 1330 PPPLPGVGIPPPPPLPGAGIPPPPPLPGMGI-PPAPAPPLPPPGTGIPPPPLLPVSGPPL 1388
Query: 837 FPXXGXXXGXFF*KXPXXXXFPPPP 911
P G P F PPP
Sbjct: 1389 LPQVGSST----LPTPQVCGFLPPP 1409
>AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 30.7 bits (66), Expect = 7.8
Identities = 24/85 (28%), Positives = 24/85 (28%)
Frame = +3
Query: 657 PPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPXXQKXXXPPF 836
PPP PP G PP PP P PP P P PP
Sbjct: 1330 PPPLPGVGIPPPPPLPGAGIPPPPPLPGMGI-PPAPAPPLPPPGTGIPPPPLLPVSGPPL 1388
Query: 837 FPXXGXXXGXFF*KXPXXXXFPPPP 911
P G P F PPP
Sbjct: 1389 LPQVGSST----LPTPQVCGFLPPP 1409
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 30.7 bits (66), Expect = 7.8
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = -3
Query: 547 PFTPXGGXXTXSPXPKPGXXGFXGGERXXGPKXKXXXPGGXG--XFXXXKXXPXXP 386
P P G P KPG G GG+ GP + G G F K P P
Sbjct: 845 PTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPP 900
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 30.7 bits (66), Expect = 7.8
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = -3
Query: 547 PFTPXGGXXTXSPXPKPGXXGFXGGERXXGPKXKXXXPGGXG--XFXXXKXXPXXP 386
P P G P KPG G GG+ GP + G G F K P P
Sbjct: 896 PTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPP 951
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 30.7 bits (66), Expect = 7.8
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = -3
Query: 547 PFTPXGGXXTXSPXPKPGXXGFXGGERXXGPKXKXXXPGGXG--XFXXXKXXPXXP 386
P P G P KPG G GG+ GP + G G F K P P
Sbjct: 884 PTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPP 939
>AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein.
Length = 1332
Score = 30.7 bits (66), Expect = 7.8
Identities = 24/85 (28%), Positives = 24/85 (28%)
Frame = +3
Query: 657 PPPXXKXSKNFPPXFXGGXXPPGXXKXTXXFXPPXKXPXXXPPLFPXPXPXXQKXXXPPF 836
PPP PP G PP PP P PP P P PP
Sbjct: 797 PPPLPGVGIPPPPPLPGAGIPPPPPLPGMGI-PPAPAPPLPPPGTGIPPPPLLPVSGPPL 855
Query: 837 FPXXGXXXGXFF*KXPXXXXFPPPP 911
P G P F PPP
Sbjct: 856 LPQVGSST----LPTPQVCGFLPPP 876
>AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collagen
isoform C preproprotein variant protein.
Length = 1017
Score = 30.7 bits (66), Expect = 7.8
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = -3
Query: 547 PFTPXGGXXTXSPXPKPGXXGFXGGERXXGPKXKXXXPGGXG--XFXXXKXXPXXP 386
P P G P KPG G GG+ GP + G G F K P P
Sbjct: 95 PTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPP 150
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,452,956
Number of Sequences: 237096
Number of extensions: 1955259
Number of successful extensions: 8325
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 2705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6814
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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