Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_J17
         (918 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT007355-1|AAP36019.1|   73|Homo sapiens ubiquitin-like 5 protein.    146   7e-35
BC110839-1|AAI10840.1|   73|Homo sapiens ubiquitin-like 5 protein.    146   7e-35
BC007053-1|AAH07053.1|   73|Homo sapiens UBL5 protein protein.        146   7e-35
AF313915-1|AAK14178.1|   73|Homo sapiens ubiquitin-like 5 protei...   146   7e-35
BC110812-1|AAI10813.1|  238|Homo sapiens complement component 1,...    31   5.9  

>BT007355-1|AAP36019.1|   73|Homo sapiens ubiquitin-like 5 protein.
          Length = 73

 Score =  146 bits (355), Expect = 7e-35
 Identities = 63/73 (86%), Positives = 69/73 (94%)
 Frame = +1

Query: 163 MLEVTCNDRLGKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIVLKKWYTVFKDHIKLADY 342
           M+EV CNDRLGKKVRVKCN DDT+GDLKKLIAAQTGTR++KIVLKKWYT+FKDH+ L DY
Sbjct: 1   MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 343 EIHDGMNLELYYQ 381
           EIHDGMNLELYYQ
Sbjct: 61  EIHDGMNLELYYQ 73


>BC110839-1|AAI10840.1|   73|Homo sapiens ubiquitin-like 5 protein.
          Length = 73

 Score =  146 bits (355), Expect = 7e-35
 Identities = 63/73 (86%), Positives = 69/73 (94%)
 Frame = +1

Query: 163 MLEVTCNDRLGKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIVLKKWYTVFKDHIKLADY 342
           M+EV CNDRLGKKVRVKCN DDT+GDLKKLIAAQTGTR++KIVLKKWYT+FKDH+ L DY
Sbjct: 1   MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 343 EIHDGMNLELYYQ 381
           EIHDGMNLELYYQ
Sbjct: 61  EIHDGMNLELYYQ 73


>BC007053-1|AAH07053.1|   73|Homo sapiens UBL5 protein protein.
          Length = 73

 Score =  146 bits (355), Expect = 7e-35
 Identities = 63/73 (86%), Positives = 69/73 (94%)
 Frame = +1

Query: 163 MLEVTCNDRLGKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIVLKKWYTVFKDHIKLADY 342
           M+EV CNDRLGKKVRVKCN DDT+GDLKKLIAAQTGTR++KIVLKKWYT+FKDH+ L DY
Sbjct: 1   MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 343 EIHDGMNLELYYQ 381
           EIHDGMNLELYYQ
Sbjct: 61  EIHDGMNLELYYQ 73


>AF313915-1|AAK14178.1|   73|Homo sapiens ubiquitin-like 5 protein
           protein.
          Length = 73

 Score =  146 bits (355), Expect = 7e-35
 Identities = 63/73 (86%), Positives = 69/73 (94%)
 Frame = +1

Query: 163 MLEVTCNDRLGKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIVLKKWYTVFKDHIKLADY 342
           M+EV CNDRLGKKVRVKCN DDT+GDLKKLIAAQTGTR++KIVLKKWYT+FKDH+ L DY
Sbjct: 1   MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 343 EIHDGMNLELYYQ 381
           EIHDGMNLELYYQ
Sbjct: 61  EIHDGMNLELYYQ 73


>BC110812-1|AAI10813.1|  238|Homo sapiens complement component 1, q
           subcomponent-like 4 protein.
          Length = 238

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
 Frame = -1

Query: 816 PEXPGXKGFIGRGNXK--RAPKXPXXLXPGXXAXXLXPEKTSPPLPPGP 676
           P  PG KG +GR      R P  P    PG       P +  PP PPGP
Sbjct: 51  PFPPGAKGEVGRRGKAGLRGPPGP----PGPRGPPGEPGRPGPPGPPGP 95


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,880,267
Number of Sequences: 237096
Number of extensions: 1852911
Number of successful extensions: 4841
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4755
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)