Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_J16
         (844 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    27   0.94 
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    27   0.94 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   2.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   8.8  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    23   8.8  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 26.6 bits (56), Expect = 0.94
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = -1

Query: 544 TALARQPRVSGSRSRPG 494
           T LARQP V GSR R G
Sbjct: 405 TTLARQPSVGGSRRRGG 421


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 26.6 bits (56), Expect = 0.94
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = -1

Query: 544 TALARQPRVSGSRSRPG 494
           T LARQP V GSR R G
Sbjct: 406 TTLARQPSVGGSRRRGG 422


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 16/61 (26%), Positives = 29/61 (47%)
 Frame = +3

Query: 447 DERDELKLLGATEQCGPGRERDPDTLGCRASAVTESNESLQSELDEKNEKINSEPVPEVV 626
           D  D    LG+ +Q      ++   L  + + +   N+ L     E N+KI++E  PE++
Sbjct: 344 DCADSATALGSEDQV----RQEISVLDGKEAKIRADNDLLMGRRQELNQKIDTELKPEMM 399

Query: 627 S 629
           S
Sbjct: 400 S 400


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +3

Query: 441  LVDERDELKLLGATEQCGPGRER 509
            L DE DEL   GA  + GPG  R
Sbjct: 2106 LPDEDDELGEYGAMGEDGPGEGR 2128


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 501 RERDPDTLGCRASAVTESNESLQSELDEKNEKINSEPVPEVV 626
           R+RD +     A   T  +   QS+  +K +K  S P PE V
Sbjct: 132 RKRDNNARQRSAQRETPKSSGGQSKQPKKKKKKRSLPKPEAV 173


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,823
Number of Sequences: 2352
Number of extensions: 12347
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)