Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_J16
         (844 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071019-1|AAL48641.1|  329|Drosophila melanogaster RE09661p pro...    30   3.5  
AE014134-3126|AAF53822.1|  377|Drosophila melanogaster CG13082-P...    30   3.5  
AY058623-1|AAL13852.1| 1139|Drosophila melanogaster LD31543p pro...    29   8.0  
AE014298-2841|AAF48954.2| 1139|Drosophila melanogaster CG32533-P...    29   8.0  

>AY071019-1|AAL48641.1|  329|Drosophila melanogaster RE09661p
           protein.
          Length = 329

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 137 YSQTQTGDLNVRADFENIVFLIAIP 211
           Y Q Q G  N+RAD EN + L+  P
Sbjct: 40  YDQRQEGQYNIRADLENFMILLIPP 64


>AE014134-3126|AAF53822.1|  377|Drosophila melanogaster CG13082-PA
           protein.
          Length = 377

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 137 YSQTQTGDLNVRADFENIVFLIAIP 211
           Y Q Q G  N+RAD EN + L+  P
Sbjct: 88  YDQRQEGQYNIRADLENFMILLIPP 112


>AY058623-1|AAL13852.1| 1139|Drosophila melanogaster LD31543p
           protein.
          Length = 1139

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
 Frame = -3

Query: 485 FCSTKKF*LISLINQSVCIETPSTRNDDFNGTRITSKAFLIGTDLNFVXGCLVRRTLPLL 306
           F  T+KF  I  + Q+      +    D      TS+  ++  D        V + L   
Sbjct: 127 FRQTEKFQRIRKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDF 186

Query: 305 GHRLCSVTDCRFL-CFSLTSNLLRDLMINSSSAGLRLETQYSRSRPERLNLLF 150
           G+R  + T  R L C SL   +  +L+ +  S  +  + ++ RSR +  N+LF
Sbjct: 187 GYRSIACTQPRRLACVSLCKRVAHELLDDYGSR-VAFQIRFERSRTKLTNILF 238


>AE014298-2841|AAF48954.2| 1139|Drosophila melanogaster CG32533-PA
           protein.
          Length = 1139

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
 Frame = -3

Query: 485 FCSTKKF*LISLINQSVCIETPSTRNDDFNGTRITSKAFLIGTDLNFVXGCLVRRTLPLL 306
           F  T+KF  I  + Q+      +    D      TS+  ++  D        V + L   
Sbjct: 127 FRQTEKFQRIRKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDF 186

Query: 305 GHRLCSVTDCRFL-CFSLTSNLLRDLMINSSSAGLRLETQYSRSRPERLNLLF 150
           G+R  + T  R L C SL   +  +L+ +  S  +  + ++ RSR +  N+LF
Sbjct: 187 GYRSIACTQPRRLACVSLCKRVAHELLDDYGSR-VAFQIRFERSRTKLTNILF 238


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,424,997
Number of Sequences: 53049
Number of extensions: 560010
Number of successful extensions: 1814
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1814
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)