Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_J16
(844 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 31 0.78
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 30 2.4
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 30 2.4
AF022969-6|AAB69890.1| 136|Caenorhabditis elegans Hypothetical ... 29 4.1
AF101319-6|AAC69351.1| 314|Caenorhabditis elegans Hypothetical ... 29 5.5
U40801-2|AAA81502.2| 324|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical ... 28 7.2
U39996-3|AAA81089.1| 621|Caenorhabditis elegans Hypothetical pr... 28 9.5
U39996-2|AAU20848.1| 607|Caenorhabditis elegans Hypothetical pr... 28 9.5
U21317-2|AAA62531.3| 729|Caenorhabditis elegans Hypothetical pr... 28 9.5
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 31.5 bits (68), Expect = 0.78
Identities = 14/63 (22%), Positives = 27/63 (42%)
Frame = +1
Query: 229 IRSLRRFDVKEKQRKRQSVTEQSRCPSNGSVRRTKHPXTKLRSVPIRKALEVILVPLKSS 408
+R +R + ++RKR + + CP +T HP IR + ++ PL+
Sbjct: 853 VRRVRSAMPRRRKRKRVKIKKSRSCPILWKTEKTPHPMKSKSMTCIRIPKKTVIAPLRKE 912
Query: 409 FLV 417
+
Sbjct: 913 IKI 915
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 31.5 bits (68), Expect = 0.78
Identities = 14/63 (22%), Positives = 27/63 (42%)
Frame = +1
Query: 229 IRSLRRFDVKEKQRKRQSVTEQSRCPSNGSVRRTKHPXTKLRSVPIRKALEVILVPLKSS 408
+R +R + ++RKR + + CP +T HP IR + ++ PL+
Sbjct: 853 VRRVRSAMPRRRKRKRVKIKKSRSCPILWKTEKTPHPMKSKSMTCIRIPKKTVIAPLRKE 912
Query: 409 FLV 417
+
Sbjct: 913 IKI 915
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 31.5 bits (68), Expect = 0.78
Identities = 14/63 (22%), Positives = 27/63 (42%)
Frame = +1
Query: 229 IRSLRRFDVKEKQRKRQSVTEQSRCPSNGSVRRTKHPXTKLRSVPIRKALEVILVPLKSS 408
+R +R + ++RKR + + CP +T HP IR + ++ PL+
Sbjct: 853 VRRVRSAMPRRRKRKRVKIKKSRSCPILWKTEKTPHPMKSKSMTCIRIPKKTVIAPLRKE 912
Query: 409 FLV 417
+
Sbjct: 913 IKI 915
>Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical
protein T01G5.7 protein.
Length = 332
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
Frame = +3
Query: 516 DTLGCRASAVTESNESLQ---SELDEKNEKINS 605
DT+ V E+N+ LQ +ELDE++EKINS
Sbjct: 52 DTMATDIEKVLETNQKLQLAFAELDEQSEKINS 84
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical
protein F47A4.2 protein.
Length = 3498
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +3
Query: 429 DADALVDERDELKLLGATEQCGPGRERDPDTLGCRASAVTESNESLQSELDEKNEKINSE 608
DA+ D ++ KL+ E+ G+E + DT A T + +S + + N+KI+ E
Sbjct: 592 DANDKTDASEKQKLV---EEEPTGKENEDDTSSKTAKTSTSAEKSEAPSIVDSNDKIDKE 648
Query: 609 P 611
P
Sbjct: 649 P 649
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical
protein K03H1.2 protein.
Length = 1131
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 282 SYRTEPMSK*-WK-RSSNQTPRYKVEIGTDKKSFGGDSR 392
S R EP S+ WK RS +QTPR+KV + S+ D R
Sbjct: 106 SERREPSSRRGWKDRSGDQTPRFKVPDTPSRMSWDQDDR 144
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex
determination protein MOG-1 protein.
Length = 1131
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 282 SYRTEPMSK*-WK-RSSNQTPRYKVEIGTDKKSFGGDSR 392
S R EP S+ WK RS +QTPR+KV + S+ D R
Sbjct: 106 SERREPSSRRGWKDRSGDQTPRFKVPDTPSRMSWDQDDR 144
>AF022969-6|AAB69890.1| 136|Caenorhabditis elegans Hypothetical
protein C29G2.1 protein.
Length = 136
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 130 ALLQSNANRRFKRSGRLREYCVSNR 204
AL+ + NR+FK+S +L +YC S +
Sbjct: 90 ALVTNGDNRQFKKSKKLDQYCASGK 114
>AF101319-6|AAC69351.1| 314|Caenorhabditis elegans Hypothetical
protein K08D9.1 protein.
Length = 314
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 373 ALEVILVPLKSSFLVEGVSMQTLWL 447
A+ +++ PL S ++ E +S+QT WL
Sbjct: 72 AIPILVTPLLSPYIQENISLQTGWL 96
>U40801-2|AAA81502.2| 324|Caenorhabditis elegans Hypothetical
protein F28E10.4 protein.
Length = 324
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -3
Query: 719 KIIYNFFL-NKVLLKTKMA*LKKDLEISKLCRNHFWNG 609
+++++F L N + KT ++ D+ +S +C N F+NG
Sbjct: 20 RVVFSFKLSNHDIGKTDAVKIEDDMTVSYICSNSFFNG 57
>AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical
protein F15E6.6 protein.
Length = 1228
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 84 HVSCWCYCSRRPSPLRTTTVKRKQEI*TFGPTSRIL 191
H+ CW YC+R + KRK+ I F TS+I+
Sbjct: 884 HIECWEYCTR-----WSDFEKRKETIENFNKTSKIV 914
>U39996-3|AAA81089.1| 621|Caenorhabditis elegans Hypothetical
protein C56E6.3a protein.
Length = 621
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 498 GRERDPDTLGCRASAVTESNESLQSELDEKNEK 596
GR++D D L +S +S SL S EKNEK
Sbjct: 215 GRDKDKDNLKDGSSTNLKSTWSLFSSSSEKNEK 247
>U39996-2|AAU20848.1| 607|Caenorhabditis elegans Hypothetical
protein C56E6.3b protein.
Length = 607
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 498 GRERDPDTLGCRASAVTESNESLQSELDEKNEK 596
GR++D D L +S +S SL S EKNEK
Sbjct: 215 GRDKDKDNLKDGSSTNLKSTWSLFSSSSEKNEK 247
>U21317-2|AAA62531.3| 729|Caenorhabditis elegans Hypothetical
protein B0495.5 protein.
Length = 729
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 662 LKKDLEISKLCRNHFWNG 609
LKK +E+ K+C FWNG
Sbjct: 545 LKKAVELQKICDVKFWNG 562
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,169,595
Number of Sequences: 27780
Number of extensions: 290979
Number of successful extensions: 918
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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