Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_J14
         (888 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            34   0.007
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.8  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   7.1  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 33.9 bits (74), Expect = 0.007
 Identities = 26/87 (29%), Positives = 28/87 (32%)
 Frame = +2

Query: 461 GAPPPPPXXXXXXPXPPXGGXXXXPPXGGXXXXPKXXXXPGKXXFPXXPPXXPXPKXXPX 640
           G PPPPP        PP       PP       P     P +  FP   P  P  +  P 
Sbjct: 529 GPPPPPPPGGAVLNIPP----QFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPP- 583

Query: 641 GGFXPXXPPPXGXX*KXXPPPPXXXTP 721
               P  PPP G      PP P    P
Sbjct: 584 ---APPPPPPMG-----PPPSPLAGGP 602


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 20/74 (27%), Positives = 22/74 (29%)
 Frame = -1

Query: 648 NPPXGXXXGXGXXGGXXGKXFXPGXXXXXGXXXXPPXGGXKXXPPXGGXGXXXXXXGGGG 469
           NP  G     G  GG  G     G                +  P  GG G      GGGG
Sbjct: 158 NPSSGGRSSSGGGGGGGGGG-GAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGG 216

Query: 468 GAPKXKXXXPXGGG 427
           G+         GGG
Sbjct: 217 GSSGGPGPGGGGGG 230



 Score = 25.4 bits (53), Expect = 2.3
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -3

Query: 721 GGXXPXGWGGXFLXXXPGGGG 659
           GG  P G GG      PGGGG
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGG 228


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -2

Query: 794 GGGGXRGGXXGGFXGGXP 741
           GG G  GG  GG   G P
Sbjct: 684 GGAGSSGGSGGGLASGSP 701


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.153    0.529 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,382
Number of Sequences: 2352
Number of extensions: 9815
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)