Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_J12
(897 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC004207-1|AAH04207.1| 543|Homo sapiens CHK2 checkpoint homolog... 90 1e-17
AY800241-1|AAV41895.1| 543|Homo sapiens CHK2 checkpoint homolog... 90 1e-17
AY551300-1|AAS58461.1| 339|Homo sapiens protein kinase Chk2 tra... 90 1e-17
AY551299-1|AAS58460.1| 514|Homo sapiens protein kinase Chk2 tra... 90 1e-17
AY551298-1|AAS58459.1| 289|Homo sapiens protein kinase Chk2 tra... 90 1e-17
AL121825-1|CAH73823.1| 543|Homo sapiens CHK2 checkpoint homolog... 90 1e-17
AL117330-1|CAH73875.1| 543|Homo sapiens CHK2 checkpoint homolog... 90 1e-17
AJ131197-1|CAA10319.1| 543|Homo sapiens protein kinase protein. 90 1e-17
AF174135-1|AAD48504.1| 543|Homo sapiens protein kinase CHK2 pro... 90 1e-17
AF096279-1|AAD11784.1| 543|Homo sapiens HuCds1 kinase protein. 90 1e-17
AF086904-1|AAC83693.1| 543|Homo sapiens protein kinase Chk2 pro... 90 1e-17
AB040105-1|BAB17231.1| 514|Homo sapiens CHK2 protein. 90 1e-17
CR456418-1|CAG30304.1| 586|Homo sapiens CHEK2 protein. 89 3e-17
AY551297-1|AAS58458.1| 586|Homo sapiens protein kinase Chk2 tra... 89 3e-17
AY551303-1|AAS58464.1| 452|Homo sapiens protein kinase Chk2 tra... 49 3e-05
AY551305-1|AAS58466.1| 234|Homo sapiens protein kinase Chk2 tra... 48 3e-05
AY551302-1|AAS58463.1| 203|Homo sapiens protein kinase Chk2 tra... 47 8e-05
AJ783839-1|CAH04270.1| 207|Homo sapiens protein kinase CHK2 pro... 47 8e-05
M14162-1|AAB04636.1| 4563|Homo sapiens APOB protein. 32 3.2
AY358700-1|AAQ89063.1| 417|Homo sapiens ASYL692 protein. 32 3.2
AY220121-1|AAO65245.1| 286|Homo sapiens germinal center B-cell ... 32 3.2
AY220120-1|AAO65244.1| 337|Homo sapiens germinal center B-cell ... 32 3.2
AY220119-1|AAO65243.1| 335|Homo sapiens germinal center B-cell ... 32 3.2
AY220118-1|AAO65242.1| 435|Homo sapiens germinal center B-cell ... 32 3.2
X04714-1|CAA28420.1| 4560|Homo sapiens apo-B100 precursor protein. 31 5.7
X04506-1|CAA28191.1| 4563|Homo sapiens protein ( Human mRNA for ... 31 5.7
M10374-1|AAA51750.1| 1455|Homo sapiens APOB protein. 31 5.7
BC111498-1|AAI11499.1| 435|Homo sapiens serpin peptidase inhibi... 31 7.5
AF217975-1|AAG17218.1| 322|Homo sapiens unknown protein. 31 7.5
>BC004207-1|AAH04207.1| 543|Homo sapiens CHK2 checkpoint homolog
(S. pombe) protein.
Length = 543
Score = 89.8 bits (213), Expect = 1e-17
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Frame = +3
Query: 360 IDLIQPEFSLGRSFNCTFIMRKDNIKESI-IRNVSKLHFVIKRNLSELLSP-AIITDLSH 533
++ + + GR +C + + +K + R SK HF I R + S A I D S
Sbjct: 106 LECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSG 165
Query: 534 NGTFVNGEDIGKGNSRVLDDNDVISVTHRIVKIFIFKDLLKNEQDQVPKEISPKYYISRV 713
NGTFVN E +GKG R L++N I+++ K+F+F DL ++Q PK + +Y +S+
Sbjct: 166 NGTFVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKT 225
Query: 714 LGQGACGLVKLVYDKINAPSMP*KL*KKVDLQXGQINHINKPAKIXNEI 860
LG GACG VKL +++ + K+ K G + + EI
Sbjct: 226 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 274
>AY800241-1|AAV41895.1| 543|Homo sapiens CHK2 checkpoint homolog
(S. pombe) protein.
Length = 543
Score = 89.8 bits (213), Expect = 1e-17
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Frame = +3
Query: 360 IDLIQPEFSLGRSFNCTFIMRKDNIKESI-IRNVSKLHFVIKRNLSELLSP-AIITDLSH 533
++ + + GR +C + + +K + R SK HF I R + S A I D S
Sbjct: 106 LECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSG 165
Query: 534 NGTFVNGEDIGKGNSRVLDDNDVISVTHRIVKIFIFKDLLKNEQDQVPKEISPKYYISRV 713
NGTFVN E +GKG R L++N I+++ K+F+F DL ++Q PK + +Y +S+
Sbjct: 166 NGTFVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKT 225
Query: 714 LGQGACGLVKLVYDKINAPSMP*KL*KKVDLQXGQINHINKPAKIXNEI 860
LG GACG VKL +++ + K+ K G + + EI
Sbjct: 226 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 274
>AY551300-1|AAS58461.1| 339|Homo sapiens protein kinase Chk2
transcript variant del9-12 protein.
Length = 339
Score = 89.8 bits (213), Expect = 1e-17
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Frame = +3
Query: 360 IDLIQPEFSLGRSFNCTFIMRKDNIKESI-IRNVSKLHFVIKRNLSELLSP-AIITDLSH 533
++ + + GR +C + + +K + R SK HF I R + S A I D S
Sbjct: 106 LECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSG 165
Query: 534 NGTFVNGEDIGKGNSRVLDDNDVISVTHRIVKIFIFKDLLKNEQDQVPKEISPKYYISRV 713
NGTFVN E +GKG R L++N I+++ K+F+F DL ++Q PK + +Y +S+
Sbjct: 166 NGTFVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKT 225
Query: 714 LGQGACGLVKLVYDKINAPSMP*KL*KKVDLQXGQINHINKPAKIXNEI 860
LG GACG VKL +++ + K+ K G + + EI
Sbjct: 226 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 274
>AY551299-1|AAS58460.1| 514|Homo sapiens protein kinase Chk2
transcript variant del9 protein.
Length = 514
Score = 89.8 bits (213), Expect = 1e-17
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Frame = +3
Query: 360 IDLIQPEFSLGRSFNCTFIMRKDNIKESI-IRNVSKLHFVIKRNLSELLSP-AIITDLSH 533
++ + + GR +C + + +K + R SK HF I R + S A I D S
Sbjct: 106 LECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSG 165
Query: 534 NGTFVNGEDIGKGNSRVLDDNDVISVTHRIVKIFIFKDLLKNEQDQVPKEISPKYYISRV 713
NGTFVN E +GKG R L++N I+++ K+F+F DL ++Q PK + +Y +S+
Sbjct: 166 NGTFVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKT 225
Query: 714 LGQGACGLVKLVYDKINAPSMP*KL*KKVDLQXGQINHINKPAKIXNEI 860
LG GACG VKL +++ + K+ K G + + EI
Sbjct: 226 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 274
>AY551298-1|AAS58459.1| 289|Homo sapiens protein kinase Chk2
transcript variant del7 protein.
Length = 289
Score = 89.8 bits (213), Expect = 1e-17
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Frame = +3
Query: 360 IDLIQPEFSLGRSFNCTFIMRKDNIKESI-IRNVSKLHFVIKRNLSELLSP-AIITDLSH 533
++ + + GR +C + + +K + R SK HF I R + S A I D S
Sbjct: 106 LECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSG 165
Query: 534 NGTFVNGEDIGKGNSRVLDDNDVISVTHRIVKIFIFKDLLKNEQDQVPKEISPKYYISRV 713
NGTFVN E +GKG R L++N I+++ K+F+F DL ++Q PK + +Y +S+
Sbjct: 166 NGTFVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKT 225
Query: 714 LGQGACGLVKLVYDKINAPSMP*KL*KKVDLQXGQINHINKPAKIXNEI 860
LG GACG VKL +++ + K+ K G + + EI
Sbjct: 226 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 274
>AL121825-1|CAH73823.1| 543|Homo sapiens CHK2 checkpoint homolog
(S. pombe) protein.
Length = 543
Score = 89.8 bits (213), Expect = 1e-17
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Frame = +3
Query: 360 IDLIQPEFSLGRSFNCTFIMRKDNIKESI-IRNVSKLHFVIKRNLSELLSP-AIITDLSH 533
++ + + GR +C + + +K + R SK HF I R + S A I D S
Sbjct: 106 LECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSG 165
Query: 534 NGTFVNGEDIGKGNSRVLDDNDVISVTHRIVKIFIFKDLLKNEQDQVPKEISPKYYISRV 713
NGTFVN E +GKG R L++N I+++ K+F+F DL ++Q PK + +Y +S+
Sbjct: 166 NGTFVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKT 225
Query: 714 LGQGACGLVKLVYDKINAPSMP*KL*KKVDLQXGQINHINKPAKIXNEI 860
LG GACG VKL +++ + K+ K G + + EI
Sbjct: 226 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 274
>AL117330-1|CAH73875.1| 543|Homo sapiens CHK2 checkpoint homolog
(S. pombe) protein.
Length = 543
Score = 89.8 bits (213), Expect = 1e-17
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Frame = +3
Query: 360 IDLIQPEFSLGRSFNCTFIMRKDNIKESI-IRNVSKLHFVIKRNLSELLSP-AIITDLSH 533
++ + + GR +C + + +K + R SK HF I R + S A I D S
Sbjct: 106 LECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSG 165
Query: 534 NGTFVNGEDIGKGNSRVLDDNDVISVTHRIVKIFIFKDLLKNEQDQVPKEISPKYYISRV 713
NGTFVN E +GKG R L++N I+++ K+F+F DL ++Q PK + +Y +S+
Sbjct: 166 NGTFVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKT 225
Query: 714 LGQGACGLVKLVYDKINAPSMP*KL*KKVDLQXGQINHINKPAKIXNEI 860
LG GACG VKL +++ + K+ K G + + EI
Sbjct: 226 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 274
>AJ131197-1|CAA10319.1| 543|Homo sapiens protein kinase protein.
Length = 543
Score = 89.8 bits (213), Expect = 1e-17
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Frame = +3
Query: 360 IDLIQPEFSLGRSFNCTFIMRKDNIKESI-IRNVSKLHFVIKRNLSELLSP-AIITDLSH 533
++ + + GR +C + + +K + R SK HF I R + S A I D S
Sbjct: 106 LECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSG 165
Query: 534 NGTFVNGEDIGKGNSRVLDDNDVISVTHRIVKIFIFKDLLKNEQDQVPKEISPKYYISRV 713
NGTFVN E +GKG R L++N I+++ K+F+F DL ++Q PK + +Y +S+
Sbjct: 166 NGTFVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKT 225
Query: 714 LGQGACGLVKLVYDKINAPSMP*KL*KKVDLQXGQINHINKPAKIXNEI 860
LG GACG VKL +++ + K+ K G + + EI
Sbjct: 226 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 274
>AF174135-1|AAD48504.1| 543|Homo sapiens protein kinase CHK2
protein.
Length = 543
Score = 89.8 bits (213), Expect = 1e-17
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Frame = +3
Query: 360 IDLIQPEFSLGRSFNCTFIMRKDNIKESI-IRNVSKLHFVIKRNLSELLSP-AIITDLSH 533
++ + + GR +C + + +K + R SK HF I R + S A I D S
Sbjct: 106 LECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSG 165
Query: 534 NGTFVNGEDIGKGNSRVLDDNDVISVTHRIVKIFIFKDLLKNEQDQVPKEISPKYYISRV 713
NGTFVN E +GKG R L++N I+++ K+F+F DL ++Q PK + +Y +S+
Sbjct: 166 NGTFVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKT 225
Query: 714 LGQGACGLVKLVYDKINAPSMP*KL*KKVDLQXGQINHINKPAKIXNEI 860
LG GACG VKL +++ + K+ K G + + EI
Sbjct: 226 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 274
>AF096279-1|AAD11784.1| 543|Homo sapiens HuCds1 kinase protein.
Length = 543
Score = 89.8 bits (213), Expect = 1e-17
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Frame = +3
Query: 360 IDLIQPEFSLGRSFNCTFIMRKDNIKESI-IRNVSKLHFVIKRNLSELLSP-AIITDLSH 533
++ + + GR +C + + +K + R SK HF I R + S A I D S
Sbjct: 106 LECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSG 165
Query: 534 NGTFVNGEDIGKGNSRVLDDNDVISVTHRIVKIFIFKDLLKNEQDQVPKEISPKYYISRV 713
NGTFVN E +GKG R L++N I+++ K+F+F DL ++Q PK + +Y +S+
Sbjct: 166 NGTFVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKT 225
Query: 714 LGQGACGLVKLVYDKINAPSMP*KL*KKVDLQXGQINHINKPAKIXNEI 860
LG GACG VKL +++ + K+ K G + + EI
Sbjct: 226 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 274
>AF086904-1|AAC83693.1| 543|Homo sapiens protein kinase Chk2
protein.
Length = 543
Score = 89.8 bits (213), Expect = 1e-17
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Frame = +3
Query: 360 IDLIQPEFSLGRSFNCTFIMRKDNIKESI-IRNVSKLHFVIKRNLSELLSP-AIITDLSH 533
++ + + GR +C + + +K + R SK HF I R + S A I D S
Sbjct: 106 LECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSG 165
Query: 534 NGTFVNGEDIGKGNSRVLDDNDVISVTHRIVKIFIFKDLLKNEQDQVPKEISPKYYISRV 713
NGTFVN E +GKG R L++N I+++ K+F+F DL ++Q PK + +Y +S+
Sbjct: 166 NGTFVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKT 225
Query: 714 LGQGACGLVKLVYDKINAPSMP*KL*KKVDLQXGQINHINKPAKIXNEI 860
LG GACG VKL +++ + K+ K G + + EI
Sbjct: 226 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 274
>AB040105-1|BAB17231.1| 514|Homo sapiens CHK2 protein.
Length = 514
Score = 89.8 bits (213), Expect = 1e-17
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Frame = +3
Query: 360 IDLIQPEFSLGRSFNCTFIMRKDNIKESI-IRNVSKLHFVIKRNLSELLSP-AIITDLSH 533
++ + + GR +C + + +K + R SK HF I R + S A I D S
Sbjct: 106 LECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSG 165
Query: 534 NGTFVNGEDIGKGNSRVLDDNDVISVTHRIVKIFIFKDLLKNEQDQVPKEISPKYYISRV 713
NGTFVN E +GKG R L++N I+++ K+F+F DL ++Q PK + +Y +S+
Sbjct: 166 NGTFVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKT 225
Query: 714 LGQGACGLVKLVYDKINAPSMP*KL*KKVDLQXGQINHINKPAKIXNEI 860
LG GACG VKL +++ + K+ K G + + EI
Sbjct: 226 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 274
>CR456418-1|CAG30304.1| 586|Homo sapiens CHEK2 protein.
Length = 586
Score = 88.6 bits (210), Expect = 3e-17
Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Frame = +3
Query: 369 IQPEFSLGRSFNCTFIMRKDNIKESI-IRNVSKLHFVIKRNLSELLSP-AIITDLSHNGT 542
+ + GR +C + + +K + R SK HF I R + S A I D S NGT
Sbjct: 152 VNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGT 211
Query: 543 FVNGEDIGKGNSRVLDDNDVISVTHRIVKIFIFKDLLKNEQDQVPKEISPKYYISRVLGQ 722
FVN E +GKG R L++N I+++ K+F+F DL ++Q PK + +Y +S+ LG
Sbjct: 212 FVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGS 271
Query: 723 GACGLVKLVYDKINAPSMP*KL*KKVDLQXGQINHINKPAKIXNEI 860
GACG VKL +++ + K+ K G + + EI
Sbjct: 272 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 317
>AY551297-1|AAS58458.1| 586|Homo sapiens protein kinase Chk2
transcript variant insX protein.
Length = 586
Score = 88.6 bits (210), Expect = 3e-17
Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Frame = +3
Query: 369 IQPEFSLGRSFNCTFIMRKDNIKESI-IRNVSKLHFVIKRNLSELLSP-AIITDLSHNGT 542
+ + GR +C + + +K + R SK HF I R + S A I D S NGT
Sbjct: 152 VNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGT 211
Query: 543 FVNGEDIGKGNSRVLDDNDVISVTHRIVKIFIFKDLLKNEQDQVPKEISPKYYISRVLGQ 722
FVN E +GKG R L++N I+++ K+F+F DL ++Q PK + +Y +S+ LG
Sbjct: 212 FVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGS 271
Query: 723 GACGLVKLVYDKINAPSMP*KL*KKVDLQXGQINHINKPAKIXNEI 860
GACG VKL +++ + K+ K G + + EI
Sbjct: 272 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 317
>AY551303-1|AAS58464.1| 452|Homo sapiens protein kinase Chk2
transcript variant del2-3 protein.
Length = 452
Score = 48.8 bits (111), Expect = 3e-05
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = +3
Query: 630 IFIFKDLLKNEQDQVPKEISPKYYISRVLGQGACGLVKLVYDKINAPSMP*KL*KKVDLQ 809
+F+F DL ++Q PK + +Y +S+ LG GACG VKL +++ + K+ K
Sbjct: 107 VFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFA 166
Query: 810 XGQINHINKPAKIXNEI 860
G + + EI
Sbjct: 167 IGSAREADPALNVETEI 183
>AY551305-1|AAS58466.1| 234|Homo sapiens protein kinase Chk2
transcript variant insZ protein.
Length = 234
Score = 48.4 bits (110), Expect = 3e-05
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Frame = +3
Query: 360 IDLIQPEFSLGRSFNCTFIMRKDNIKESI-IRNVSKLHFVIKRNLSELLSP-AIITDLSH 533
++ + + GR +C + + +K + R SK HF I R + S A I D S
Sbjct: 106 LECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSG 165
Query: 534 NGTFVNGEDIGKGNSRVLDDNDVISVT-----HRIVKIFIFKDLLKNEQDQVPKEISP 692
NGTFVN E +GKG R L++N I+++ +I+KI+ K + V +P
Sbjct: 166 NGTFVNTELVGKGKRRPLNNNSEIALSLSRNKEKILKIYSLSRFSKIRRGAVAHVFNP 223
>AY551302-1|AAS58463.1| 203|Homo sapiens protein kinase Chk2
transcript variant del4 protein.
Length = 203
Score = 47.2 bits (107), Expect = 8e-05
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +3
Query: 360 IDLIQPEFSLGRSFNCTFIMRKDNIKESI-IRNVSKLHFVIKRNLSELLSP-AIITDLSH 533
++ + + GR +C + + +K + R SK HF I R + S A I D S
Sbjct: 106 LECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSG 165
Query: 534 NGTFVNGEDIGKGNSRVLDDNDVISVT 614
NGTFVN E +GKG R L++N I+++
Sbjct: 166 NGTFVNTELVGKGKRRPLNNNSEIALS 192
>AJ783839-1|CAH04270.1| 207|Homo sapiens protein kinase CHK2
protein.
Length = 207
Score = 47.2 bits (107), Expect = 8e-05
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +3
Query: 360 IDLIQPEFSLGRSFNCTFIMRKDNIKESI-IRNVSKLHFVIKRNLSELLSP-AIITDLSH 533
++ + + GR +C + + +K + R SK HF I R + S A I D S
Sbjct: 106 LECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSG 165
Query: 534 NGTFVNGEDIGKGNSRVLDDNDVISVT 614
NGTFVN E +GKG R L++N I+++
Sbjct: 166 NGTFVNTELVGKGKRRPLNNNSEIALS 192
>M14162-1|AAB04636.1| 4563|Homo sapiens APOB protein.
Length = 4563
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +3
Query: 234 SQVDWSQQNTPATIPNIWGRLYSTKVSINGKYC-WKQEYQPEYIDLIQPEFSLGRSFNCT 410
+ +W Q I +I R G Y WK + Q Y +L+ E G++ +
Sbjct: 4110 NNAEWVYQGAIRQIDDIDVRFQKAASGTTGTYQEWKDKAQNLYQELLTQE---GQA---S 4163
Query: 411 FIMRKDNIKESIIRNVSKLHFVIKRNLSELL 503
F KDN+ + ++R K H +K+ + L+
Sbjct: 4164 FQGLKDNVFDGLVRVTQKFHMKVKKLIDSLI 4194
>AY358700-1|AAQ89063.1| 417|Homo sapiens ASYL692 protein.
Length = 417
Score = 31.9 bits (69), Expect = 3.2
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 333 WKQEYQPEYIDLIQPEFSLGRSFNCTFIMRKDNIKESIIRNVSKLHFVIKRN---LSELL 503
W Q +I++ P FS+ S+N I+ K I+ + +N + + KR+ +S+
Sbjct: 294 WSHSLQKRWIEVFIPRFSISASYNLETILPKMGIQNAFDKN-ADFSGIAKRDSLQVSKAT 352
Query: 504 SPAIITDLSHNGT 542
A++ D+S GT
Sbjct: 353 HKAVL-DVSEEGT 364
>AY220121-1|AAO65245.1| 286|Homo sapiens germinal center B-cell
expressed transcript 1 isoform D protein.
Length = 286
Score = 31.9 bits (69), Expect = 3.2
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 333 WKQEYQPEYIDLIQPEFSLGRSFNCTFIMRKDNIKESIIRNVSKLHFVIKRN---LSELL 503
W Q +I++ P FS+ S+N I+ K I+ + +N + + KR+ +S+
Sbjct: 163 WSHSLQKRWIEVFIPRFSISASYNLETILPKMGIQNAFDKN-ADFSGIAKRDSLQVSKAT 221
Query: 504 SPAIITDLSHNGT 542
A++ D+S GT
Sbjct: 222 HKAVL-DVSEEGT 233
>AY220120-1|AAO65244.1| 337|Homo sapiens germinal center B-cell
expressed transcript 1 isoform C protein.
Length = 337
Score = 31.9 bits (69), Expect = 3.2
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 333 WKQEYQPEYIDLIQPEFSLGRSFNCTFIMRKDNIKESIIRNVSKLHFVIKRN---LSELL 503
W Q +I++ P FS+ S+N I+ K I+ + +N + + KR+ +S+
Sbjct: 214 WSHSLQKRWIEVFIPRFSISASYNLETILPKMGIQNAFDKN-ADFSGIAKRDSLQVSKAT 272
Query: 504 SPAIITDLSHNGT 542
A++ D+S GT
Sbjct: 273 HKAVL-DVSEEGT 284
>AY220119-1|AAO65243.1| 335|Homo sapiens germinal center B-cell
expressed transcript 1 isoform B protein.
Length = 335
Score = 31.9 bits (69), Expect = 3.2
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 333 WKQEYQPEYIDLIQPEFSLGRSFNCTFIMRKDNIKESIIRNVSKLHFVIKRN---LSELL 503
W Q +I++ P FS+ S+N I+ K I+ + +N + + KR+ +S+
Sbjct: 212 WSHSLQKRWIEVFIPRFSISASYNLETILPKMGIQNAFDKN-ADFSGIAKRDSLQVSKAT 270
Query: 504 SPAIITDLSHNGT 542
A++ D+S GT
Sbjct: 271 HKAVL-DVSEEGT 282
>AY220118-1|AAO65242.1| 435|Homo sapiens germinal center B-cell
expressed transcript 1 isoform A protein.
Length = 435
Score = 31.9 bits (69), Expect = 3.2
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 333 WKQEYQPEYIDLIQPEFSLGRSFNCTFIMRKDNIKESIIRNVSKLHFVIKRN---LSELL 503
W Q +I++ P FS+ S+N I+ K I+ + +N + + KR+ +S+
Sbjct: 312 WSHSLQKRWIEVFIPRFSISASYNLETILPKMGIQNAFDKN-ADFSGIAKRDSLQVSKAT 370
Query: 504 SPAIITDLSHNGT 542
A++ D+S GT
Sbjct: 371 HKAVL-DVSEEGT 382
>X04714-1|CAA28420.1| 4560|Homo sapiens apo-B100 precursor protein.
Length = 4560
Score = 31.1 bits (67), Expect = 5.7
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +3
Query: 234 SQVDWSQQNTPATIPNIWGRLYSTKVSINGKYC-WKQEYQPEYIDLIQPEFSLGRSFNCT 410
+ +W Q I +I R G Y WK + Q Y +L+ E G++ +
Sbjct: 4107 NNAEWVYQGAIRQIDDIDVRFQKAASGTTGTYQEWKDKAQNLYQELLTQE---GQA---S 4160
Query: 411 FIMRKDNIKESIIRNVSKLHFVIKRNLSELL 503
F KDN+ + ++R K H +K + L+
Sbjct: 4161 FQGLKDNVFDGLVRVTQKFHMKVKHLIDSLI 4191
>X04506-1|CAA28191.1| 4563|Homo sapiens protein ( Human mRNA for
apolipoprotein B-100. ).
Length = 4563
Score = 31.1 bits (67), Expect = 5.7
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +3
Query: 234 SQVDWSQQNTPATIPNIWGRLYSTKVSINGKYC-WKQEYQPEYIDLIQPEFSLGRSFNCT 410
+ +W Q I +I R G Y WK + Q Y +L+ E G++ +
Sbjct: 4110 NNAEWVYQGAIRQIDDIDVRFQKAASGTTGTYQEWKDKAQNLYQELLTQE---GQA---S 4163
Query: 411 FIMRKDNIKESIIRNVSKLHFVIKRNLSELL 503
F KDN+ + ++R K H +K + L+
Sbjct: 4164 FQGLKDNVFDGLVRVTQKFHMKVKHLIDSLI 4194
>M10374-1|AAA51750.1| 1455|Homo sapiens APOB protein.
Length = 1455
Score = 31.1 bits (67), Expect = 5.7
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +3
Query: 234 SQVDWSQQNTPATIPNIWGRLYSTKVSINGKYC-WKQEYQPEYIDLIQPEFSLGRSFNCT 410
+ +W Q I +I R G Y WK + Q Y +L+ E G++ +
Sbjct: 1002 NNAEWVYQGAIRQIDDIDVRFQKAASGTTGTYQEWKDKAQNLYQELLTQE---GQA---S 1055
Query: 411 FIMRKDNIKESIIRNVSKLHFVIKRNLSELL 503
F KDN+ + ++R K H +K + L+
Sbjct: 1056 FQGLKDNVFDGLVRVTQKFHMKVKHLIDSLI 1086
>BC111498-1|AAI11499.1| 435|Homo sapiens serpin peptidase
inhibitor, clade A (alpha-1 antiproteinase,
antitrypsin), memb protein.
Length = 435
Score = 30.7 bits (66), Expect = 7.5
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +3
Query: 333 WKQEYQPEYIDLIQPEFSLGRSFNCTFIMRKDNIKESIIRNVSKLHFVIKRN---LSELL 503
W Q +I++ P FS+ S+N I+ K I+ +N + + KR+ +S+
Sbjct: 312 WSHSLQKRWIEVFIPRFSISASYNLETILPKMGIQNVFDKN-ADFSGIAKRDSLQVSKAT 370
Query: 504 SPAIITDLSHNGT 542
A++ D+S GT
Sbjct: 371 HKAVL-DVSEEGT 382
>AF217975-1|AAG17218.1| 322|Homo sapiens unknown protein.
Length = 322
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 702 ISRVLGQGACGLVKLVYDKINAPSMP*KL*KKVDLQXGQINHINKPAKIXNEI 860
+S+ LG GACG VKL +++ + K+ K G + + EI
Sbjct: 1 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 53
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,644,972
Number of Sequences: 237096
Number of extensions: 2268987
Number of successful extensions: 3817
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3817
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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