Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_J11
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0110 - 31727376-31727381,31727554-31727664,31728071-317281...    29   6.5  

>03_06_0110 -
           31727376-31727381,31727554-31727664,31728071-31728133,
           31729202-31729331,31729532-31729701,31729800-31729859,
           31729941-31730018,31730108-31730197,31730275-31731118,
           31731220-31731281,31731362-31731423,31731511-31731700
          Length = 621

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +1

Query: 346 QQIMNITDQSLDEAQARKHTLNCHRMKPAL 435
           +QI N+    +DEA+   +++ C+++KPA+
Sbjct: 464 KQIRNVATGQVDEAKRVLNSIRCNKVKPAM 493


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,064,736
Number of Sequences: 37544
Number of extensions: 325839
Number of successful extensions: 715
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)