BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_J11
(888 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 26 1.8
AJ302655-1|CAC35520.1| 332|Anopheles gambiae gSG5 protein protein. 24 5.4
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 24 7.1
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 23 9.4
AY095933-1|AAM34435.1| 505|Anopheles gambiae cytochrome P450 pr... 23 9.4
AF117748-1|AAD38334.1| 365|Anopheles gambiae serine protease 14... 23 9.4
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 25.8 bits (54), Expect = 1.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 415 HRMKPALFSVLCEIKEKTVLSLRNTQEEEPPD 510
HRM P + V E+ K + R +E+EP D
Sbjct: 334 HRMAPWVHRVFIELLPKVLCIERPKKEDEPSD 365
>AJ302655-1|CAC35520.1| 332|Anopheles gambiae gSG5 protein protein.
Length = 332
Score = 24.2 bits (50), Expect = 5.4
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 664 QIRQIYHQELDKYENACNEFTTHVMNLLREQ 756
QIR + E +Y + C H M LL Q
Sbjct: 167 QIRTYFQNEFVEYRDVCLPDEDHCMKLLHAQ 197
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.8 bits (49), Expect = 7.1
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 291 AFSSRQPITLRSHHSAAMRHH 229
A SS P+ SHH + HH
Sbjct: 805 ALSSHSPVGAGSHHLHHLHHH 825
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 23.4 bits (48), Expect = 9.4
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 664 QIRQIYHQELDKYENACNEFTTHVMNLLREQSRTRPIT 777
Q +Q +HQ + + +T ++NL +EQ +T+ T
Sbjct: 132 QQQQQHHQHQQLQQQQHHYYTPQLLNLDQEQLQTQTFT 169
>AY095933-1|AAM34435.1| 505|Anopheles gambiae cytochrome P450
protein.
Length = 505
Score = 23.4 bits (48), Expect = 9.4
Identities = 10/31 (32%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 433 LFSVLCEIKEKTVLSL-RNTQEEEPPDPQLM 522
+FS +CEI ++ + ++ R + +EP D +L+
Sbjct: 148 MFSTICEIGDEFLATVNRFVERDEPLDVKLL 178
>AF117748-1|AAD38334.1| 365|Anopheles gambiae serine protease 14A
protein.
Length = 365
Score = 23.4 bits (48), Expect = 9.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 712 RHSHTCRAPDDRSAVSAPVLHGSPSAR 632
R CR PD R V PV PS R
Sbjct: 21 RGQEACRTPDHRDGVCHPV-QQCPSVR 46
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,008
Number of Sequences: 2352
Number of extensions: 13078
Number of successful extensions: 99
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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