Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_J10
(848 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008961-1|AAH08961.1| 278|Homo sapiens trinucleotide repeat co... 149 1e-35
BC008898-1|AAH08898.1| 278|Homo sapiens trinucleotide repeat co... 149 1e-35
BC004423-1|AAH04423.1| 278|Homo sapiens trinucleotide repeat co... 149 1e-35
AY358960-1|AAQ89319.1| 278|Homo sapiens CTG4A protein. 149 1e-35
AL035587-1|CAB75301.1| 278|Homo sapiens protein ( Human DNA seq... 149 1e-35
BC032339-1|AAH32339.1| 248|Homo sapiens PRotein Associated with... 142 2e-33
BC019903-1|AAH19903.2| 246|Homo sapiens MGC40499 protein protein. 142 2e-33
AY359100-1|AAQ89458.1| 248|Homo sapiens GPVR1909 protein. 142 2e-33
AK075537-1|BAC11680.1| 248|Homo sapiens protein ( Homo sapiens ... 142 2e-33
BC022093-1|AAH22093.3| 136|Homo sapiens TNRC5 protein protein. 88 4e-17
AF161347-1|AAF28907.1| 142|Homo sapiens HSPC084 protein. 75 3e-13
AK090425-1|BAC03406.1| 114|Homo sapiens FLJ00338 protein protein. 66 2e-10
U80744-1|AAB91442.1| 143|Homo sapiens CTG4a protein. 64 8e-10
AK223178-1|BAD96898.1| 406|Homo sapiens COP9 signalosome subuni... 33 1.7
BC093007-1|AAH93007.1| 406|Homo sapiens COP9 constitutive photo... 31 4.0
BC009292-1|AAH09292.1| 406|Homo sapiens COP9 constitutive photo... 31 4.0
BC004302-1|AAH04302.1| 406|Homo sapiens COP9 constitutive photo... 31 4.0
AK001210-1|BAA91555.1| 394|Homo sapiens protein ( Homo sapiens ... 31 4.0
AF100757-1|AAD43021.1| 405|Homo sapiens COP9 complex subunit 4 ... 31 4.0
AB017788-1|BAA33438.1| 224|Homo sapiens hdkk-4 protein. 31 4.0
BC107047-1|AAI07048.1| 224|Homo sapiens dickkopf homolog 4 (Xen... 31 5.3
BC107046-1|AAI07047.1| 224|Homo sapiens dickkopf homolog 4 (Xen... 31 5.3
AF177397-1|AAF02677.1| 224|Homo sapiens dickkopf-4 protein. 31 5.3
AB018005-1|BAA33475.1| 224|Homo sapiens hdkk-4 protein. 31 5.3
AB064054-1|BAC01682.1| 261|Homo sapiens immunoglobulin kappa li... 30 9.2
>BC008961-1|AAH08961.1| 278|Homo sapiens trinucleotide repeat
containing 5 protein.
Length = 278
Score = 149 bits (362), Expect = 1e-35
Identities = 66/116 (56%), Positives = 88/116 (75%)
Frame = +3
Query: 375 VCDRILEYNIHKERSDSTRFAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEITHM 554
+C R+L+Y++HKER+ S RFAKGMS+TF+TLH LV KGVKV + IP ELW++ SAE+ +
Sbjct: 103 ICKRLLDYSLHKERTGSNRFAKGMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADL 162
Query: 555 KTQCESLLEENEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGE 722
K QC+ L+EE E +EDWY NHQ +EDL +LC H LKG D SCL E+ + +KG+
Sbjct: 163 KKQCDVLVEEFEEVIEDWYRNHQ-EEDLTEFLCANHVLKGKDTSCLAEQWSGKKGD 217
Score = 64.1 bits (149), Expect = 6e-10
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +2
Query: 173 SEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELR 352
+EE+ V+ ++CEVCK +A EL++ EETGK EVI GY + D Q KY KS+LR
Sbjct: 37 AEENDWVRLPSKCEVCKYVAVELKSAFEETGKTKEVIGTGYGILD-QKASGVKYTKSDLR 95
Query: 353 LIESLEG-CVR*NIRIQYSQRKVR 421
LIE E C R + YS K R
Sbjct: 96 LIEVTETICKR---LLDYSLHKER 116
>BC008898-1|AAH08898.1| 278|Homo sapiens trinucleotide repeat
containing 5 protein.
Length = 278
Score = 149 bits (362), Expect = 1e-35
Identities = 66/116 (56%), Positives = 88/116 (75%)
Frame = +3
Query: 375 VCDRILEYNIHKERSDSTRFAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEITHM 554
+C R+L+Y++HKER+ S RFAKGMS+TF+TLH LV KGVKV + IP ELW++ SAE+ +
Sbjct: 103 ICKRLLDYSLHKERTGSNRFAKGMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADL 162
Query: 555 KTQCESLLEENEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGE 722
K QC+ L+EE E +EDWY NHQ +EDL +LC H LKG D SCL E+ + +KG+
Sbjct: 163 KKQCDVLVEEFEEVIEDWYRNHQ-EEDLTEFLCANHVLKGKDTSCLAEQWSGKKGD 217
Score = 64.1 bits (149), Expect = 6e-10
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +2
Query: 173 SEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELR 352
+EE+ V+ ++CEVCK +A EL++ EETGK EVI GY + D Q KY KS+LR
Sbjct: 37 AEENDWVRLPSKCEVCKYVAVELKSAFEETGKTKEVIGTGYGILD-QKASGVKYTKSDLR 95
Query: 353 LIESLEG-CVR*NIRIQYSQRKVR 421
LIE E C R + YS K R
Sbjct: 96 LIEVTETICKR---LLDYSLHKER 116
>BC004423-1|AAH04423.1| 278|Homo sapiens trinucleotide repeat
containing 5 protein.
Length = 278
Score = 149 bits (362), Expect = 1e-35
Identities = 66/116 (56%), Positives = 88/116 (75%)
Frame = +3
Query: 375 VCDRILEYNIHKERSDSTRFAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEITHM 554
+C R+L+Y++HKER+ S RFAKGMS+TF+TLH LV KGVKV + IP ELW++ SAE+ +
Sbjct: 103 ICKRLLDYSLHKERTGSNRFAKGMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADL 162
Query: 555 KTQCESLLEENEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGE 722
K QC+ L+EE E +EDWY NHQ +EDL +LC H LKG D SCL E+ + +KG+
Sbjct: 163 KKQCDVLVEEFEEVIEDWYRNHQ-EEDLTEFLCANHVLKGKDTSCLAEQWSGKKGD 217
Score = 64.1 bits (149), Expect = 6e-10
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +2
Query: 173 SEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELR 352
+EE+ V+ ++CEVCK +A EL++ EETGK EVI GY + D Q KY KS+LR
Sbjct: 37 AEENDWVRLPSKCEVCKYVAVELKSAFEETGKTKEVIGTGYGILD-QKASGVKYTKSDLR 95
Query: 353 LIESLEG-CVR*NIRIQYSQRKVR 421
LIE E C R + YS K R
Sbjct: 96 LIEVTETICKR---LLDYSLHKER 116
>AY358960-1|AAQ89319.1| 278|Homo sapiens CTG4A protein.
Length = 278
Score = 149 bits (362), Expect = 1e-35
Identities = 66/116 (56%), Positives = 88/116 (75%)
Frame = +3
Query: 375 VCDRILEYNIHKERSDSTRFAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEITHM 554
+C R+L+Y++HKER+ S RFAKGMS+TF+TLH LV KGVKV + IP ELW++ SAE+ +
Sbjct: 103 ICKRLLDYSLHKERTGSNRFAKGMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADL 162
Query: 555 KTQCESLLEENEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGE 722
K QC+ L+EE E +EDWY NHQ +EDL +LC H LKG D SCL E+ + +KG+
Sbjct: 163 KKQCDVLVEEFEEVIEDWYRNHQ-EEDLTEFLCANHVLKGKDTSCLAEQWSGKKGD 217
Score = 64.1 bits (149), Expect = 6e-10
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +2
Query: 173 SEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELR 352
+EE+ V+ ++CEVCK +A EL++ EETGK EVI GY + D Q KY KS+LR
Sbjct: 37 AEENDWVRLPSKCEVCKYVAVELKSAFEETGKTKEVIGTGYGILD-QKASGVKYTKSDLR 95
Query: 353 LIESLEG-CVR*NIRIQYSQRKVR 421
LIE E C R + YS K R
Sbjct: 96 LIEVTETICKR---LLDYSLHKER 116
>AL035587-1|CAB75301.1| 278|Homo sapiens protein ( Human DNA
sequence from clone RP3-475N16 on chromosome 6p12.3-21.2
Contains part of a novel gene,a novel gene (CTG4A), a
gene similar ).
Length = 278
Score = 149 bits (362), Expect = 1e-35
Identities = 66/116 (56%), Positives = 88/116 (75%)
Frame = +3
Query: 375 VCDRILEYNIHKERSDSTRFAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEITHM 554
+C R+L+Y++HKER+ S RFAKGMS+TF+TLH LV KGVKV + IP ELW++ SAE+ +
Sbjct: 103 ICKRLLDYSLHKERTGSNRFAKGMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADL 162
Query: 555 KTQCESLLEENEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGE 722
K QC+ L+EE E +EDWY NHQ +EDL +LC H LKG D SCL E+ + +KG+
Sbjct: 163 KKQCDVLVEEFEEVIEDWYRNHQ-EEDLTEFLCANHVLKGKDTSCLAEQWSGKKGD 217
Score = 64.1 bits (149), Expect = 6e-10
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +2
Query: 173 SEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELR 352
+EE+ V+ ++CEVCK +A EL++ EETGK EVI GY + D Q KY KS+LR
Sbjct: 37 AEENDWVRLPSKCEVCKYVAVELKSAFEETGKTKEVIGTGYGILD-QKASGVKYTKSDLR 95
Query: 353 LIESLEG-CVR*NIRIQYSQRKVR 421
LIE E C R + YS K R
Sbjct: 96 LIEVTETICKR---LLDYSLHKER 116
>BC032339-1|AAH32339.1| 248|Homo sapiens PRotein Associated with
Tlr4 protein.
Length = 248
Score = 142 bits (343), Expect = 2e-33
Identities = 65/126 (51%), Positives = 91/126 (72%)
Frame = +3
Query: 369 KGVCDRILEYNIHKERSDSTRFAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEIT 548
+ +C+RIL+Y++H ER S R+AKG SQT TL GLV KGVKVDLGIPLELWD+PS E+T
Sbjct: 91 ENLCERILDYSVHAERKGSLRYAKGQSQTMATLKGLVQKGVKVDLGIPLELWDEPSVEVT 150
Query: 549 HMKTQCESLLEENEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGEKG 728
++K QCE++LEE E V DWY++HQ ++ L+ +LC H L + +CL E ++ G
Sbjct: 151 YLKKQCETMLEEFEDIVGDWYFHHQ-EQPLQNFLCEGHVLPAAETACLQETWTGKEITDG 209
Query: 729 IKERSE 746
+E++E
Sbjct: 210 -EEKTE 214
Score = 65.7 bits (153), Expect = 2e-10
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +2
Query: 167 IKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSE 346
+K E+D + ++CEVCK+L+TELQ L TG+ EV+E+G LD + K+ Y SE
Sbjct: 24 LKEEDDDTERLPSKCEVCKLLSTELQAELSRTGRSREVLELGQVLDTGKRKRHVPYSVSE 83
Query: 347 LRLIESLEG-CVR 382
RL E+LE C R
Sbjct: 84 TRLEEALENLCER 96
>BC019903-1|AAH19903.2| 246|Homo sapiens MGC40499 protein protein.
Length = 246
Score = 142 bits (343), Expect = 2e-33
Identities = 65/126 (51%), Positives = 91/126 (72%)
Frame = +3
Query: 369 KGVCDRILEYNIHKERSDSTRFAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEIT 548
+ +C+RIL+Y++H ER S R+AKG SQT TL GLV KGVKVDLGIPLELWD+PS E+T
Sbjct: 91 ENLCERILDYSVHAERKGSLRYAKGQSQTMATLKGLVQKGVKVDLGIPLELWDEPSVEVT 150
Query: 549 HMKTQCESLLEENEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGEKG 728
++K QCE++LEE E V DWY++HQ ++ L+ +LC H L + +CL E ++ G
Sbjct: 151 YLKKQCETMLEEFEDIVGDWYFHHQ-EQPLQNFLCEGHVLPAAETACLQETWTGKEITDG 209
Query: 729 IKERSE 746
+E++E
Sbjct: 210 -EEKTE 214
Score = 65.7 bits (153), Expect = 2e-10
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +2
Query: 167 IKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSE 346
+K E+D + ++CEVCK+L+TELQ L TG+ EV+E+G LD + K+ Y SE
Sbjct: 24 LKEEDDDTERLPSKCEVCKLLSTELQAELSRTGRSREVLELGQVLDTGKRKRHVPYSVSE 83
Query: 347 LRLIESLEG-CVR 382
RL E+LE C R
Sbjct: 84 TRLEEALENLCER 96
>AY359100-1|AAQ89458.1| 248|Homo sapiens GPVR1909 protein.
Length = 248
Score = 142 bits (343), Expect = 2e-33
Identities = 65/126 (51%), Positives = 91/126 (72%)
Frame = +3
Query: 369 KGVCDRILEYNIHKERSDSTRFAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEIT 548
+ +C+RIL+Y++H ER S R+AKG SQT TL GLV KGVKVDLGIPLELWD+PS E+T
Sbjct: 91 ENLCERILDYSVHAERKGSLRYAKGQSQTMATLKGLVQKGVKVDLGIPLELWDEPSVEVT 150
Query: 549 HMKTQCESLLEENEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGEKG 728
++K QCE++LEE E V DWY++HQ ++ L+ +LC H L + +CL E ++ G
Sbjct: 151 YLKKQCETMLEEFEDIVGDWYFHHQ-EQPLQNFLCEGHVLPAAETACLQETWTGKEITDG 209
Query: 729 IKERSE 746
+E++E
Sbjct: 210 -EEKTE 214
Score = 65.7 bits (153), Expect = 2e-10
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +2
Query: 167 IKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSE 346
+K E+D + ++CEVCK+L+TELQ L TG+ EV+E+G LD + K+ Y SE
Sbjct: 24 LKEEDDDTERLPSKCEVCKLLSTELQAELSRTGRSREVLELGQVLDTGKRKRHVPYSVSE 83
Query: 347 LRLIESLEG-CVR 382
RL E+LE C R
Sbjct: 84 TRLEEALENLCER 96
>AK075537-1|BAC11680.1| 248|Homo sapiens protein ( Homo sapiens
cDNA PSEC0237 fis, clone HEMBA1007186, weakly similar to
Homo sapiens CTG4a mRNA. ).
Length = 248
Score = 142 bits (343), Expect = 2e-33
Identities = 65/126 (51%), Positives = 91/126 (72%)
Frame = +3
Query: 369 KGVCDRILEYNIHKERSDSTRFAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEIT 548
+ +C+RIL+Y++H ER S R+AKG SQT TL GLV KGVKVDLGIPLELWD+PS E+T
Sbjct: 91 ENLCERILDYSVHAERKGSLRYAKGQSQTMATLKGLVQKGVKVDLGIPLELWDEPSVEVT 150
Query: 549 HMKTQCESLLEENEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGEKG 728
++K QCE++LEE E V DWY++HQ ++ L+ +LC H L + +CL E ++ G
Sbjct: 151 YLKKQCETMLEEFEDIVGDWYFHHQ-EQPLQNFLCEGHVLPAAETACLQETWTGKEITDG 209
Query: 729 IKERSE 746
+E++E
Sbjct: 210 -EEKTE 214
Score = 65.7 bits (153), Expect = 2e-10
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +2
Query: 167 IKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSE 346
+K E+D + ++CEVCK+L+TELQ L TG+ EV+E+G LD + K+ Y SE
Sbjct: 24 LKEEDDDTERLPSKCEVCKLLSTELQAELSRTGRSREVLELGQVLDTGKRKRHVPYSVSE 83
Query: 347 LRLIESLEG-CVR 382
RL E+LE C R
Sbjct: 84 TRLEEALENLCER 96
>BC022093-1|AAH22093.3| 136|Homo sapiens TNRC5 protein protein.
Length = 136
Score = 87.8 bits (208), Expect = 4e-17
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +3
Query: 495 VDLGIPLELWDKPSAEITHMKTQCESLLEENEIAVEDWYWNHQGKEDLKIYLCTKHALKG 674
V + IP ELW++ SAE+ +K QC+ L+EE E +EDWY NHQ +EDL +LC H LKG
Sbjct: 1 VVMDIPYELWNETSAEVADLKKQCDVLVEEFEEVIEDWYRNHQ-EEDLTEFLCANHVLKG 59
Query: 675 VDDSCLYEELNNEKGE 722
D SCL E+ + +KG+
Sbjct: 60 KDTSCLAEQWSGKKGD 75
>AF161347-1|AAF28907.1| 142|Homo sapiens HSPC084 protein.
Length = 142
Score = 74.9 bits (176), Expect = 3e-13
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +3
Query: 525 DKPSAEITHMKTQCESLLEENEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEEL 704
++ SAE+ +K QC+ L+EE E +EDWY NHQ +EDL +LC H LKG D SCL E+
Sbjct: 1 NETSAEVADLKKQCDVLVEEFEEVIEDWYRNHQ-EEDLTEFLCANHVLKGKDTSCLAEQW 59
Query: 705 NNEKGE 722
+ +KG+
Sbjct: 60 SGKKGD 65
>AK090425-1|BAC03406.1| 114|Homo sapiens FLJ00338 protein protein.
Length = 114
Score = 66.1 bits (154), Expect = 2e-10
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = +3
Query: 561 QCESLLEENEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGE 722
QC+ L+EE E +EDWY NHQ +EDL +LC H LKG D SCL E+ + +KG+
Sbjct: 1 QCDVLVEEFEEVIEDWYRNHQ-EEDLTEFLCANHVLKGKDTSCLAEQWSGKKGD 53
>U80744-1|AAB91442.1| 143|Homo sapiens CTG4a protein.
Length = 143
Score = 63.7 bits (148), Expect = 8e-10
Identities = 33/66 (50%), Positives = 43/66 (65%)
Frame = +2
Query: 173 SEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELR 352
+EE+ V+ ++CEVCK +A EL++ EETGK EVI GY + D Q KY KS+LR
Sbjct: 37 AEENDWVRLPSKCEVCKYVAVELKSAFEETGKTKEVIGTGYGILD-QKASGVKYTKSDLR 95
Query: 353 LIESLE 370
LIE E
Sbjct: 96 LIEVTE 101
>AK223178-1|BAD96898.1| 406|Homo sapiens COP9 signalosome subunit 4
variant protein.
Length = 406
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -1
Query: 569 FTLCF-HMSDFSRRFIPQLQWYSEIHFYTFIYETVKGLKCLTHSFGKSCTI 420
+ +C+ + D+ R+FI Q Y+E+ + T ++E+ K L+ L H+ CTI
Sbjct: 187 YKVCYARVLDYRRKFIEAAQRYNELSYKTIVHES-KRLEALKHAL--HCTI 234
>BC093007-1|AAH93007.1| 406|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 4 (Arabidopsis)
protein.
Length = 406
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -1
Query: 569 FTLCF-HMSDFSRRFIPQLQWYSEIHFYTFIYETVKGLKCLTHSFGKSCTI 420
+ +C+ + D+ R+FI Q Y+E+ + T ++E+ + L+ L H+ CTI
Sbjct: 187 YKVCYARVLDYRRKFIEAAQRYNELSYKTIVHESER-LEALKHAL--HCTI 234
>BC009292-1|AAH09292.1| 406|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 4 (Arabidopsis)
protein.
Length = 406
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -1
Query: 569 FTLCF-HMSDFSRRFIPQLQWYSEIHFYTFIYETVKGLKCLTHSFGKSCTI 420
+ +C+ + D+ R+FI Q Y+E+ + T ++E+ + L+ L H+ CTI
Sbjct: 187 YKVCYARVLDYRRKFIEAAQRYNELSYKTIVHESER-LEALKHAL--HCTI 234
>BC004302-1|AAH04302.1| 406|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 4 (Arabidopsis)
protein.
Length = 406
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -1
Query: 569 FTLCF-HMSDFSRRFIPQLQWYSEIHFYTFIYETVKGLKCLTHSFGKSCTI 420
+ +C+ + D+ R+FI Q Y+E+ + T ++E+ + L+ L H+ CTI
Sbjct: 187 YKVCYARVLDYRRKFIEAAQRYNELSYKTIVHESER-LEALKHAL--HCTI 234
>AK001210-1|BAA91555.1| 394|Homo sapiens protein ( Homo sapiens
cDNA FLJ10348 fis, clone NT2RM2001065. ).
Length = 394
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -1
Query: 569 FTLCF-HMSDFSRRFIPQLQWYSEIHFYTFIYETVKGLKCLTHSFGKSCTI 420
+ +C+ + D+ R+FI Q Y+E+ + T ++E+ + L+ L H+ CTI
Sbjct: 175 YKVCYARVLDYRRKFIEAAQRYNELSYKTIVHESER-LEALKHAL--HCTI 222
>AF100757-1|AAD43021.1| 405|Homo sapiens COP9 complex subunit 4
protein.
Length = 405
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -1
Query: 569 FTLCF-HMSDFSRRFIPQLQWYSEIHFYTFIYETVKGLKCLTHSFGKSCTI 420
+ +C+ + D+ R+FI Q Y+E+ + T ++E+ + L+ L H+ CTI
Sbjct: 186 YKVCYARVLDYRRKFIEAAQRYNELSYKTIVHESER-LEALKHAL--HCTI 233
>AB017788-1|BAA33438.1| 224|Homo sapiens hdkk-4 protein.
Length = 224
Score = 31.5 bits (68), Expect = 4.0
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +2
Query: 212 EVCKIL--ATE-LQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIESLEGCVR 382
+VC L AT L+ +L+E H G+ + + QPK+K +KS+ R + E C+R
Sbjct: 88 DVCTTLEDATPILERQLDEQDGTHAEGTTGHPVQENQPKRKPSIKKSQGRKGQEGESCLR 147
>BC107047-1|AAI07048.1| 224|Homo sapiens dickkopf homolog 4
(Xenopus laevis) protein.
Length = 224
Score = 31.1 bits (67), Expect = 5.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 239 LQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIESLEGCVR 382
L+ +L+E H G+ + + QPK+K +KS+ R + E C+R
Sbjct: 100 LERQLDEQDGTHAEGTTGHPVQENQPKRKPSIKKSQGRKGQEGESCLR 147
>BC107046-1|AAI07047.1| 224|Homo sapiens dickkopf homolog 4
(Xenopus laevis) protein.
Length = 224
Score = 31.1 bits (67), Expect = 5.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 239 LQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIESLEGCVR 382
L+ +L+E H G+ + + QPK+K +KS+ R + E C+R
Sbjct: 100 LERQLDEQDGTHAEGTTGHPVQENQPKRKPSIKKSQGRKGQEGESCLR 147
>AF177397-1|AAF02677.1| 224|Homo sapiens dickkopf-4 protein.
Length = 224
Score = 31.1 bits (67), Expect = 5.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 239 LQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIESLEGCVR 382
L+ +L+E H G+ + + QPK+K +KS+ R + E C+R
Sbjct: 100 LERQLDEQDGTHAEGTTGHPVQENQPKRKPSIKKSQGRKGQEGESCLR 147
>AB018005-1|BAA33475.1| 224|Homo sapiens hdkk-4 protein.
Length = 224
Score = 31.1 bits (67), Expect = 5.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 239 LQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIESLEGCVR 382
L+ +L+E H G+ + + QPK+K +KS+ R + E C+R
Sbjct: 100 LERQLDEQDGTHAEGTTGHPVQENQPKRKPSIKKSQGRKGQEGESCLR 147
>AB064054-1|BAC01682.1| 261|Homo sapiens immunoglobulin kappa light
chain VLJ region protein.
Length = 261
Score = 30.3 bits (65), Expect = 9.2
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 510 PLELWDKPSAEITHMKTQCESLLEENEIAVEDWYWNHQGKE-DLKIYLCTKHALKGVDD 683
PL L P A + +SLL N + DWY G+ L IYL + H GV D
Sbjct: 30 PLSLPVTPGAPASISCRSSQSLLHTNGVNFLDWYLQKPGQSPKLLIYLAS-HRASGVPD 87
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,488,234
Number of Sequences: 237096
Number of extensions: 1797292
Number of successful extensions: 5901
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5883
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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