Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_J09
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81077-7|CAB03070.2|  116|Caenorhabditis elegans Hypothetical pr...   106   2e-23
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr...    30   2.5  
AC006723-5|AAK68424.1|  575|Caenorhabditis elegans Hypothetical ...    29   4.4  

>Z81077-7|CAB03070.2|  116|Caenorhabditis elegans Hypothetical
           protein F36A2.8 protein.
          Length = 116

 Score =  106 bits (255), Expect = 2e-23
 Identities = 54/118 (45%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
 Frame = +1

Query: 451 LHKVPKVDIDKSGVFKYILLKVYDQEVDGVEPSTIVLRGYKRCNYHSDIYDEVQGKLIPF 630
           L  +  VDID  GVFKYIL++V D   +  +    V+RGY RC++H DI  E +    P 
Sbjct: 3   LADIADVDIDPKGVFKYILIQVTD---NSTKQQKFVVRGYYRCSFHDDILQETKSSA-PS 58

Query: 631 DCEPW--GGGRISHDPDNKKIHIYGYSQAYGKADHEEAAKLIKNAYPDYTITISDEGY 798
           D +    GGGRI HD   K I +YGYS  YG+ADH+ A  ++K  YPDY I  S++GY
Sbjct: 59  DLKLKCVGGGRIKHDEIGKDILVYGYSYGYGRADHQIAVDILKQKYPDYNIHFSNDGY 116


>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical protein
            C01B9.1b protein.
          Length = 1671

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 131  NQSTLFHFDPHPVFTKQKIQKMRLYSVIPSLFQL 232
            N  T+FH+ P P+  K KI ++  +    S+ QL
Sbjct: 1385 NSHTIFHYSPQPIGCKLKITELTQFGRFQSMRQL 1418


>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical protein
            C01B9.1a protein.
          Length = 1601

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 131  NQSTLFHFDPHPVFTKQKIQKMRLYSVIPSLFQL 232
            N  T+FH+ P P+  K KI ++  +    S+ QL
Sbjct: 1315 NSHTIFHYSPQPIGCKLKITELTQFGRFQSMRQL 1348


>AC006723-5|AAK68424.1|  575|Caenorhabditis elegans Hypothetical
           protein Y19D10B.5 protein.
          Length = 575

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 19/83 (22%), Positives = 31/83 (37%)
 Frame = +2

Query: 158 PHPVFTKQKIQKMRLYSVIPSLFQLTNCRTTTTSSKCQIFTKNIYKCDSNKKV*FSANN* 337
           PH      +  K+  +  + +  Q   C    +   C  F    Y C ++ ++    N  
Sbjct: 4   PHSTMVSPRASKINGWKTLLNCLQTIKCIQNVSLDPCNDFYD--YVCTNDTRIITKLNFT 61

Query: 338 CLLILSNYLVDPE*IIPNSGTQI 406
            L      LV+P    PN+GT I
Sbjct: 62  SLFEDREILVNPNISFPNNGTYI 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,557,064
Number of Sequences: 27780
Number of extensions: 442497
Number of successful extensions: 1011
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)