Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_J07
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56213-1|CAA39670.1| 1651|Caenorhabditis elegans vitellogenin pr... 30 1.9
AF047659-3|AAC04423.2| 1650|Caenorhabditis elegans Vitellogenin ... 30 1.9
AF047659-2|AAQ91901.1| 1651|Caenorhabditis elegans Vitellogenin ... 30 1.9
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 30 1.9
U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical p... 30 2.5
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 3.3
U10414-8|AAA19076.1| 272|Caenorhabditis elegans Hypothetical pr... 29 4.4
U97005-13|AAB52290.1| 868|Caenorhabditis elegans Hypothetical p... 29 5.8
U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical p... 29 5.8
Z72507-13|CAH60789.1| 515|Caenorhabditis elegans Hypothetical p... 28 7.6
Z72507-10|CAA96629.1| 531|Caenorhabditis elegans Hypothetical p... 28 7.6
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 28 7.6
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 28 7.6
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 28 7.6
U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4 p... 28 7.6
AY204175-1|AAO39179.1| 238|Caenorhabditis elegans nuclear recep... 28 7.6
AL021470-2|CAE17952.1| 398|Caenorhabditis elegans Hypothetical ... 28 7.6
AL021470-1|CAA16292.1| 401|Caenorhabditis elegans Hypothetical ... 28 7.6
AC024841-3|AAK68542.1| 185|Caenorhabditis elegans Hypothetical ... 28 7.6
>X56213-1|CAA39670.1| 1651|Caenorhabditis elegans vitellogenin
protein.
Length = 1651
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 624 NATDSEDDVP--LKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIS*XGRSX 797
+A + E+ +P KS L KD + REM E ++ N +R K E++ D E R
Sbjct: 1492 DAENQENTIPKFAKSYLYKDSKCNYEREMFE-KEENFQRIEKNQEEEKDQEMNYEESR-- 1548
Query: 798 WRRCLREPSR*ITLIRRXNVIC 863
R EP+ + ++ R + IC
Sbjct: 1549 -REQDDEPTEQVAIVERQHEIC 1569
>AF047659-3|AAC04423.2| 1650|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 6, isoform
a protein.
Length = 1650
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 624 NATDSEDDVP--LKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIS*XGRSX 797
+A + E+ +P KS L KD + REM E ++ N +R K E++ D E R
Sbjct: 1492 DAENQENTIPKFAKSYLYKDSKCNYEREMFE-KEENFQRIEKNQEEEKDQEMNYEESR-- 1548
Query: 798 WRRCLREPSR*ITLIRRXNVIC 863
R EP+ + ++ R + IC
Sbjct: 1549 -REQDDEPTEQVAIVERQHEIC 1569
>AF047659-2|AAQ91901.1| 1651|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 6, isoform
c protein.
Length = 1651
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 624 NATDSEDDVP--LKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIS*XGRSX 797
+A + E+ +P KS L KD + REM E ++ N +R K E++ D E R
Sbjct: 1492 DAENQENTIPKFAKSYLYKDSKCNYEREMFE-KEENFQRIEKNQEEEKDQEMNYEESR-- 1548
Query: 798 WRRCLREPSR*ITLIRRXNVIC 863
R EP+ + ++ R + IC
Sbjct: 1549 -REQDDEPTEQVAIVERQHEIC 1569
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +3
Query: 612 DDGNNATDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIS 779
DD T+ +DD K +KDK + ++ ++ +++ K E+K +S+E S
Sbjct: 81 DDEKKKTEEKDDKKSKKTEEKDKISVKKTQETKSERKDKKDEKKEDEKKEESKEKS 136
>U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical
protein C33G8.3 protein.
Length = 142
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 606 NIDDGNNATDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQ 755
N GN + E++ K KKDK+K E E +K ++++ N +++
Sbjct: 79 NKKKGNKKDEDEEEEEDKDKKKKDKKKNKDSEEEEDKKKDKKKKNDSSDE 128
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/94 (22%), Positives = 44/94 (46%)
Frame = +3
Query: 219 CLKINVKMHRITKTKLQIIYEKLTNIKIENHVLPLLLCYMCRRKLQNCHELMLKALNSEM 398
CL+ N+++ K+ +++KL N NH L L+ + + Q+ +L+ K + +
Sbjct: 480 CLQRNLELRNYMAEKIVFVFQKLNNYHALNHFLMLIAKVL---RSQSSEDLLRKCYHKKD 536
Query: 399 FLAELGRSGVQLTEQVIETNSHHESLLSQSKIET 500
L +S + E + ++HE + S +T
Sbjct: 537 VLIGGIKSLLDSIECQMIDYTYHELDMLDSHFQT 570
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/94 (22%), Positives = 44/94 (46%)
Frame = +3
Query: 219 CLKINVKMHRITKTKLQIIYEKLTNIKIENHVLPLLLCYMCRRKLQNCHELMLKALNSEM 398
CL+ N+++ K+ +++KL N NH L L+ + + Q+ +L+ K + +
Sbjct: 480 CLQRNLELRNYMAEKIVFVFQKLNNYHALNHFLMLIAKVL---RSQSSEDLLRKCYHKKD 536
Query: 399 FLAELGRSGVQLTEQVIETNSHHESLLSQSKIET 500
L +S + E + ++HE + S +T
Sbjct: 537 VLIGGIKSLLDSIECQMIDYTYHELDMLDSHFQT 570
>U10414-8|AAA19076.1| 272|Caenorhabditis elegans Hypothetical
protein F42A10.5 protein.
Length = 272
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 642 DDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEEIS 779
DD+ KKDK+K+ ++ E + RR+ ++ E + +SE++S
Sbjct: 3 DDLSAFFAKKKDKKKKSAVKIEEVGQALERRAKRQEEYEQESEDVS 48
>U97005-13|AAB52290.1| 868|Caenorhabditis elegans Hypothetical
protein F19F10.11b protein.
Length = 868
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 390 SEMFLAELGRSGVQLTEQVIETNSHH-ESLLSQSKIETVEIQEVYVKKEITEQN 548
+E F+ + ++ ++Q+I S + + Q IET E +++YVK+E E++
Sbjct: 773 AESFIEPVRIPEIRSSQQLIAGPSETLDKDVKQEPIETEEFEKIYVKREAVEED 826
>U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical
protein F19F10.11a protein.
Length = 1121
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 390 SEMFLAELGRSGVQLTEQVIETNSHH-ESLLSQSKIETVEIQEVYVKKEITEQN 548
+E F+ + ++ ++Q+I S + + Q IET E +++YVK+E E++
Sbjct: 773 AESFIEPVRIPEIRSSQQLIAGPSETLDKDVKQEPIETEEFEKIYVKREAVEED 826
>Z72507-13|CAH60789.1| 515|Caenorhabditis elegans Hypothetical
protein F17C11.7b protein.
Length = 515
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 146 FYVHTIWTLIRLNRQKNGIRRVQNMFEN 229
+YVH ++ I KNG+ R++ +F+N
Sbjct: 328 YYVHLRYSKINWKCDKNGVPRIEKIFKN 355
>Z72507-10|CAA96629.1| 531|Caenorhabditis elegans Hypothetical
protein F17C11.7a protein.
Length = 531
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 146 FYVHTIWTLIRLNRQKNGIRRVQNMFEN 229
+YVH ++ I KNG+ R++ +F+N
Sbjct: 344 YYVHLRYSKINWKCDKNGVPRIEKIFKN 371
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 639 EDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNK-RTEQKIDSEE 773
ED+ K + DKE+++ +E+ E +K + K R E K + EE
Sbjct: 258 EDEKAKKEKERIDKEEKIKKEVEEAEKKKKEEKEKRRKEVKKNREE 303
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 612 DDGNNATDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNKRTEQKIDSEE 773
DD T+ +DD K +KDK + + Q+T R +K+ E+K D ++
Sbjct: 87 DDEKKKTEEKDDKKSKKTEEKDK-----LSVKKTQETKSERKDKKDERKEDDKK 135
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +3
Query: 666 LKKDKEKQVPR---EMSECQKTNRRRSNKRTEQKIDSE 770
LKK EK +P+ MS+C KT R +NK + +K+ E
Sbjct: 377 LKKTPEKIIPKLKEAMSKCTKTLRAVANKESIEKMLDE 414
>U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4
protein.
Length = 697
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 618 GNNATDSEDDVPLKSILKKDKEKQVPREMSECQKTNRRRSNK 743
G + DSE DVP K + KEK+ +E E ++ + + +K
Sbjct: 510 GESEPDSEQDVPSKRRKGEPKEKREKKEKREKKEGKKGKKDK 551
>AY204175-1|AAO39179.1| 238|Caenorhabditis elegans nuclear receptor
NHR-65 protein.
Length = 238
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 297 KIENHVLPLLLCYMCRRKLQNCHELMLKALNSEMFLAELGRSG 425
K ENH++ L C CR LQ C+E + + N + +G G
Sbjct: 48 KCENHLIFALKCKNCR--LQRCYEAGMSSENFQFCRDLIGAKG 88
>AL021470-2|CAE17952.1| 398|Caenorhabditis elegans Hypothetical
protein Y17D7A.3b protein.
Length = 398
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 297 KIENHVLPLLLCYMCRRKLQNCHELMLKALNSEMFLAELGRSG 425
K ENH++ L C CR LQ C+E + + N + +G G
Sbjct: 48 KCENHLIFALKCKNCR--LQRCYEAGMSSENFQFCRDLIGAKG 88
>AL021470-1|CAA16292.1| 401|Caenorhabditis elegans Hypothetical
protein Y17D7A.3a protein.
Length = 401
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 297 KIENHVLPLLLCYMCRRKLQNCHELMLKALNSEMFLAELGRSG 425
K ENH++ L C CR LQ C+E + + N + +G G
Sbjct: 48 KCENHLIFALKCKNCR--LQRCYEAGMSSENFQFCRDLIGAKG 88
>AC024841-3|AAK68542.1| 185|Caenorhabditis elegans Hypothetical
protein Y59H11AM.4 protein.
Length = 185
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 615 DGNNATDSEDDVPLKSILKKDKEKQVPREMS-ECQKTNRRRSNKRTEQK 758
DG N +++VP K+ L K+K K + +E + E +K +++ + +QK
Sbjct: 67 DGGNVEGLKEEVPNKN-LSKEKGKPISKEKTGEKEKKEKKKEATQKKQK 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,357,612
Number of Sequences: 27780
Number of extensions: 278453
Number of successful extensions: 1059
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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