Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_J02
         (983 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ205685-1|ABA27099.1|  423|Homo sapiens mitochondrial ribosomal...    36   0.17 
BC000041-1|AAH00041.1|  423|Homo sapiens mitochondrial ribosomal...    36   0.17 
AL357673-2|CAH73897.1|  423|Homo sapiens mitochondrial ribosomal...    36   0.17 
AL161644-8|CAI23564.1|  423|Homo sapiens mitochondrial ribosomal...    36   0.17 
AF325707-1|AAG52881.1|  423|Homo sapiens ribosomal protein L2 pr...    36   0.17 

>DQ205685-1|ABA27099.1|  423|Homo sapiens mitochondrial ribosomal
           protein L37 protein.
          Length = 423

 Score = 36.3 bits (80), Expect = 0.17
 Identities = 24/63 (38%), Positives = 34/63 (53%)
 Frame = +2

Query: 326 HPNYKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHENVKK 505
           HP YK++ C   +    LLEG+ QA  LTKT + +  LP K+  LS +  P    EN  +
Sbjct: 96  HPLYKDQACYIFHHRCRLLEGVKQALWLTKTKLIEG-LPEKV--LSLVDDPRNHIENQDE 152

Query: 506 AIL 514
            +L
Sbjct: 153 CVL 155


>BC000041-1|AAH00041.1|  423|Homo sapiens mitochondrial ribosomal
           protein L37 protein.
          Length = 423

 Score = 36.3 bits (80), Expect = 0.17
 Identities = 24/63 (38%), Positives = 34/63 (53%)
 Frame = +2

Query: 326 HPNYKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHENVKK 505
           HP YK++ C   +    LLEG+ QA  LTKT + +  LP K+  LS +  P    EN  +
Sbjct: 96  HPLYKDQACYIFHHRCRLLEGVKQALWLTKTKLIEG-LPEKV--LSLVDDPRNHIENQDE 152

Query: 506 AIL 514
            +L
Sbjct: 153 CVL 155


>AL357673-2|CAH73897.1|  423|Homo sapiens mitochondrial ribosomal
           protein L37 protein.
          Length = 423

 Score = 36.3 bits (80), Expect = 0.17
 Identities = 24/63 (38%), Positives = 34/63 (53%)
 Frame = +2

Query: 326 HPNYKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHENVKK 505
           HP YK++ C   +    LLEG+ QA  LTKT + +  LP K+  LS +  P    EN  +
Sbjct: 96  HPLYKDQACYIFHHRCRLLEGVKQALWLTKTKLIEG-LPEKV--LSLVDDPRNHIENQDE 152

Query: 506 AIL 514
            +L
Sbjct: 153 CVL 155


>AL161644-8|CAI23564.1|  423|Homo sapiens mitochondrial ribosomal
           protein L37 protein.
          Length = 423

 Score = 36.3 bits (80), Expect = 0.17
 Identities = 24/63 (38%), Positives = 34/63 (53%)
 Frame = +2

Query: 326 HPNYKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHENVKK 505
           HP YK++ C   +    LLEG+ QA  LTKT + +  LP K+  LS +  P    EN  +
Sbjct: 96  HPLYKDQACYIFHHRCRLLEGVKQALWLTKTKLIEG-LPEKV--LSLVDDPRNHIENQDE 152

Query: 506 AIL 514
            +L
Sbjct: 153 CVL 155


>AF325707-1|AAG52881.1|  423|Homo sapiens ribosomal protein L2
           protein.
          Length = 423

 Score = 36.3 bits (80), Expect = 0.17
 Identities = 24/63 (38%), Positives = 34/63 (53%)
 Frame = +2

Query: 326 HPNYKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHENVKK 505
           HP YK++ C   +    LLEG+ QA  LTKT + +  LP K+  LS +  P    EN  +
Sbjct: 96  HPLYKDQACYIFHHRCRLLEGVKQALWLTKTKLIEG-LPEKV--LSLVDDPRNHIENQDE 152

Query: 506 AIL 514
            +L
Sbjct: 153 CVL 155


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,556,342
Number of Sequences: 237096
Number of extensions: 1395720
Number of successful extensions: 2849
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2847
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13158340014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)