Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_I24
         (954 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   0.48 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.6  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   5.9  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 0.48
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 747 PPPQXPPXXXGGPRP 791
           PPP  PP   GGPRP
Sbjct: 263 PPPIRPPNPMGGPRP 277



 Score = 25.0 bits (52), Expect = 3.4
 Identities = 19/60 (31%), Positives = 22/60 (36%)
 Frame = +1

Query: 748 PPPXXPPXXLGXPAPAKXXPPFXNPRXXTLXXSGXXXXGXGFXLPPPPXXXXXXGXGXPP 927
           PPP  PP  +G P P        +P+   L  SG    G     P PP        G PP
Sbjct: 263 PPPIRPPNPMGGPRPQ------ISPQNSNL--SGGMPSGM-VGPPRPPMPMQGGAPGGPP 313


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
 Frame = -2

Query: 950 GXWAPXGGGGXP-XPXXXXXXGGGGR 876
           G  AP GGGG    P      GGGGR
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGGGGGGR 233


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -1

Query: 951 GXXGPXGGGRGXXPXXXXXXGGGG 880
           G  G  GGGRG         GGGG
Sbjct: 70  GGRGGRGGGRGRGRGRGGRDGGGG 93


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.149    0.511 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,368
Number of Sequences: 2352
Number of extensions: 8051
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 104603103
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)