Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_I24
(954 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 37 0.024
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.075
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.075
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.075
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 33 0.30
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 32 0.70
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.70
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.70
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 32 0.70
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 31 1.6
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 31 1.6
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 30 2.1
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 30 2.1
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 30 2.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 3.7
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 3.7
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 3.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 3.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.7
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 6.5
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.5
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 6.5
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 29 6.5
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 28 8.6
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 28 8.6
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 28 8.6
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 28 8.6
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 28 8.6
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 28 8.6
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 36.7 bits (81), Expect = 0.024
Identities = 26/99 (26%), Positives = 27/99 (27%)
Frame = +3
Query: 564 KKXPPXXPKKTPPPXIXXPFRKXXXPPXLXPPPXXGENPPXXXXXXXXXXXXXXXXXXXX 743
+K PP P P P PP PPP PP
Sbjct: 505 QKSPPTPPPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPP- 563
Query: 744 XPPPQXPPXXXGGPRPXQXXXPFLXPPXXHTXXXGGXXG 860
PPP P G P P P L P GG G
Sbjct: 564 -PPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMG 601
Score = 30.3 bits (65), Expect = 2.1
Identities = 27/98 (27%), Positives = 31/98 (31%), Gaps = 6/98 (6%)
Frame = +1
Query: 676 TPPXLXXXPHRENKNXXXRGKXXXPPPXX-----PPXXLGXPAPAKXXPPFXNPRXXTLX 840
TPP PH+E + + PP PP G A P P L
Sbjct: 510 TPPPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLP 569
Query: 841 XSGXXXXGXGFXLPPPPXXXXXXGXGXPPPPX-GAXXP 951
+ G PPPP G PPPP G P
Sbjct: 570 QNLS-----GAPPPPPPPPPMLGGPPPPPPPPGGLMGP 602
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.1 bits (77), Expect = 0.075
Identities = 26/91 (28%), Positives = 26/91 (28%)
Frame = +1
Query: 679 PPXLXXXPHRENKNXXXRGKXXXPPPXXPPXXLGXPAPAKXXPPFXNPRXXTLXXSGXXX 858
PP P G PPP P G P P PP P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP--PPGGLPPISGGPPPPPPP 764
Query: 859 XGXGFXLPPPPXXXXXXGXGXPPPPXGAXXP 951
G PPPP G PPPP G P
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.1 bits (77), Expect = 0.075
Identities = 26/91 (28%), Positives = 26/91 (28%)
Frame = +1
Query: 679 PPXLXXXPHRENKNXXXRGKXXXPPPXXPPXXLGXPAPAKXXPPFXNPRXXTLXXSGXXX 858
PP P G PPP P G P P PP P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP--PPGGLPPISGGPPPPPPP 764
Query: 859 XGXGFXLPPPPXXXXXXGXGXPPPPXGAXXP 951
G PPPP G PPPP G P
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.1 bits (77), Expect = 0.075
Identities = 26/91 (28%), Positives = 26/91 (28%)
Frame = +1
Query: 679 PPXLXXXPHRENKNXXXRGKXXXPPPXXPPXXLGXPAPAKXXPPFXNPRXXTLXXSGXXX 858
PP P G PPP P G P P PP P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP--PPGGLPPISGGPPPPPPP 347
Query: 859 XGXGFXLPPPPXXXXXXGXGXPPPPXGAXXP 951
G PPPP G PPPP G P
Sbjct: 348 PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 33.1 bits (72), Expect = 0.30
Identities = 33/96 (34%), Positives = 36/96 (37%), Gaps = 1/96 (1%)
Frame = +1
Query: 655 PPXXXGK-TPPXLXXXPHRENKNXXXRGKXXXPPPXXPPXXLGXPAPAKXXPPFXNPRXX 831
PP G TPP P E ++ G PP PP G P P PP P+
Sbjct: 223 PPKGTGSPTPP-----PTGEPQDLSGEGNASRRPPP-PPKGTGSPPP----PPTGEPQDL 272
Query: 832 TLXXSGXXXXGXGFXLPPPPXXXXXXGXGXPPPPXG 939
SG G PPPP G G PPPP G
Sbjct: 273 ----SGE---GNASRRPPPPPK----GTGTPPPPTG 297
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 31.9 bits (69), Expect = 0.70
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +1
Query: 748 PPPXXPPXXLGX-PAPAKXXPPFXNPRXXTLXXSGXXXXGXGFXLPPPPXXXXXXGXGXP 924
P P PP LG P PP P G G PPPP G P
Sbjct: 501 PNPPPPPPLLGIAPMSTNAPPPPPMP--------GMAPLSTGAPTPPPPPPVGMANGGPP 552
Query: 925 PPP 933
PPP
Sbjct: 553 PPP 555
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.70
Identities = 29/99 (29%), Positives = 30/99 (30%)
Frame = +1
Query: 655 PPXXXGKTPPXLXXXPHRENKNXXXRGKXXXPPPXXPPXXLGXPAPAKXXPPFXNPRXXT 834
PP G PP P R G PPP PP G P PP P
Sbjct: 289 PPPSSGMWPPPPPPPPGR---TPGPPGMPGMPPPP-PPSRFGPPGMGGMPPP---PPPGM 341
Query: 835 LXXSGXXXXGXGFXLPPPPXXXXXXGXGXPPPPXGAXXP 951
G PPPP G G PPP + P
Sbjct: 342 RYPGGMP--------PPPPPRYPSAGPGMYPPPPPSRPP 372
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/94 (25%), Positives = 26/94 (27%), Gaps = 3/94 (3%)
Frame = +3
Query: 561 PKKXPPXXPKKTPPPXIXXPFRKXXXP--PXLXPPPXXGE-NPPXXXXXXXXXXXXXXXX 731
P+ PP PPP P R P P + PPP PP
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP 344
Query: 732 XXXXXPPPQXPPXXXGGPRPXQXXXPFLXPPXXH 833
PPP P G P PP H
Sbjct: 345 GGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGH 378
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.70
Identities = 29/99 (29%), Positives = 30/99 (30%)
Frame = +1
Query: 655 PPXXXGKTPPXLXXXPHRENKNXXXRGKXXXPPPXXPPXXLGXPAPAKXXPPFXNPRXXT 834
PP G PP P R G PPP PP G P PP P
Sbjct: 299 PPPSSGMWPPPPPPPPGR---TPGPPGMPGMPPPP-PPSRFGPPGMGGMPPP---PPPGM 351
Query: 835 LXXSGXXXXGXGFXLPPPPXXXXXXGXGXPPPPXGAXXP 951
G PPPP G G PPP + P
Sbjct: 352 RYPGGMP--------PPPPPRYPSAGPGMYPPPPPSRPP 382
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/94 (25%), Positives = 26/94 (27%), Gaps = 3/94 (3%)
Frame = +3
Query: 561 PKKXPPXXPKKTPPPXIXXPFRKXXXP--PXLXPPPXXGE-NPPXXXXXXXXXXXXXXXX 731
P+ PP PPP P R P P + PPP PP
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP 354
Query: 732 XXXXXPPPQXPPXXXGGPRPXQXXXPFLXPPXXH 833
PPP P G P PP H
Sbjct: 355 GGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGH 388
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.9 bits (69), Expect = 0.70
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +1
Query: 748 PPPXXPPXXLGXPAPAKXXPPFXNPRXXTLXXSGXXXXGXGFXLPPPPXXXXXXGXGXPP 927
PPP P P P PP G G PPPP G PP
Sbjct: 708 PPPGIPGYPPAPPPPGVGPPP----------PQGIPPMGFDPNKPPPPMFQQGFNAGAPP 757
Query: 928 PPXG 939
PP G
Sbjct: 758 PPFG 761
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/102 (22%), Positives = 28/102 (27%), Gaps = 2/102 (1%)
Frame = +3
Query: 561 PKKXPPXXPKKTPPPXIXXPFRKXXXPPXLXPPPXXGENPPXXXXXXXXXXXXXXXXXXX 740
P PP PPP + PP + PPP G P
Sbjct: 695 PPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAG 754
Query: 741 XXPPP--QXPPXXXGGPRPXQXXXPFLXPPXXHTXXXGGXXG 860
PPP + P P + + PP GG G
Sbjct: 755 APPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGG 796
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = +1
Query: 748 PPPXXPPXXLGXPAPAKXXPPFXNPRXXTLXXSGXXXXGXGFXLPPPPXXXXXXGXG-XP 924
PPP P G P + PP+ + G G+ PP P G P
Sbjct: 694 PPPGQPYGPPGGYPPQQQRPPY-QAQPYPGPPPPQQQRGYGYPPPPQPGHPYQQPYGQMP 752
Query: 925 PPPXGAXXP 951
PPP G P
Sbjct: 753 PPPHGQYQP 761
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/67 (28%), Positives = 23/67 (34%)
Frame = +1
Query: 733 GKXXXPPPXXPPXXLGXPAPAKXXPPFXNPRXXTLXXSGXXXXGXGFXLPPPPXXXXXXG 912
G+ PPP G P P + P+ P + PPPP G
Sbjct: 677 GQGPPPPPQGQQYYGGPPPPGQ---PYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQR--G 731
Query: 913 XGXPPPP 933
G PPPP
Sbjct: 732 YGYPPPP 738
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = +1
Query: 748 PPPXXPPXXLGXPAPAKXXPPFXNPRXXTLXXSGXXXXGXGFXLPPPPXXXXXXGXG-XP 924
PPP P G P + PP+ + G G+ PP P G P
Sbjct: 694 PPPGQPYGPPGGYPPQQQRPPY-QAQPYPGPPPPQQQRGYGYPPPPQPGHPYQQPYGQMP 752
Query: 925 PPPXGAXXP 951
PPP G P
Sbjct: 753 PPPHGQYQP 761
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/67 (28%), Positives = 23/67 (34%)
Frame = +1
Query: 733 GKXXXPPPXXPPXXLGXPAPAKXXPPFXNPRXXTLXXSGXXXXGXGFXLPPPPXXXXXXG 912
G+ PPP G P P + P+ P + PPPP G
Sbjct: 677 GQGPPPPPQGQQYYGGPPPPGQ---PYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQR--G 731
Query: 913 XGXPPPP 933
G PPPP
Sbjct: 732 YGYPPPP 738
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/83 (24%), Positives = 24/83 (28%)
Frame = +3
Query: 576 PXXPKKTPPPXIXXPFRKXXXPPXLXPPPXXGENPPXXXXXXXXXXXXXXXXXXXXXPPP 755
P P+ PP + PP + PPP G PP PPP
Sbjct: 297 PPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPP 356
Query: 756 QXPPXXXGGPRPXQXXXPFLXPP 824
PP P P + P
Sbjct: 357 --PPHFMRPSSPPTDGGPIITGP 377
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/83 (24%), Positives = 24/83 (28%)
Frame = +3
Query: 576 PXXPKKTPPPXIXXPFRKXXXPPXLXPPPXXGENPPXXXXXXXXXXXXXXXXXXXXXPPP 755
P P+ PP + PP + PPP G PP PPP
Sbjct: 297 PPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPP 356
Query: 756 QXPPXXXGGPRPXQXXXPFLXPP 824
PP P P + P
Sbjct: 357 --PPHFMRPSSPPTDGGPIITGP 377
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 30.3 bits (65), Expect = 2.1
Identities = 28/112 (25%), Positives = 30/112 (26%), Gaps = 1/112 (0%)
Frame = +3
Query: 501 PFXKKKNPHXXKLKXXXXXFPKKXPPXXPKKTPPPXIXXPFRKXXXPPXLXPPPXXGENP 680
P K K K K PK P PK P P P K P P P P
Sbjct: 183 PKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPE-PKPKPKPKPKPKPKPNPNPKPEP 241
Query: 681 -PXXXXXXXXXXXXXXXXXXXXXPPPQXPPXXXGGPRPXQXXXPFLXPPXXH 833
P P P+ P P+P P L P H
Sbjct: 242 KPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPEPNPMPELKPKPKH 293
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/68 (33%), Positives = 24/68 (35%)
Frame = +1
Query: 748 PPPXXPPXXLGXPAPAKXXPPFXNPRXXTLXXSGXXXXGXGFXLPPPPXXXXXXGXGXPP 927
PPP PP G + PP P G G G PPPP PP
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPPPPPPPM----GLPAVGAG--APPPPP---------PP 655
Query: 928 PPXGAXXP 951
PP GA P
Sbjct: 656 PPSGAGGP 663
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/68 (33%), Positives = 24/68 (35%)
Frame = +1
Query: 748 PPPXXPPXXLGXPAPAKXXPPFXNPRXXTLXXSGXXXXGXGFXLPPPPXXXXXXGXGXPP 927
PPP PP G + PP P G G G PPPP PP
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPPPPPPPM----GLPAVGAG--APPPPP---------PP 481
Query: 928 PPXGAXXP 951
PP GA P
Sbjct: 482 PPSGAGGP 489
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +3
Query: 534 KLKXXXXXFPKKXPPXXPKKTPPPXIXXPFRKXXXPPXLXPPPXXGENPP 683
+LK K PP P PPP + ++ PP PPP PP
Sbjct: 54 QLKDPNDNIVKATPPPPP---PPPPLISILQQAPPPPPPPPPPTLKAPPP 100
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 597 PPPXIXXPFRKXXXPPXLXPPPXXGENPP 683
PPP + P + PP PPP G PP
Sbjct: 1585 PPPLMGGPPPRLGMPPPGPPPPNGGPPPP 1613
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/62 (30%), Positives = 21/62 (33%)
Frame = +1
Query: 748 PPPXXPPXXLGXPAPAKXXPPFXNPRXXTLXXSGXXXXGXGFXLPPPPXXXXXXGXGXPP 927
PPP PP P P PP + T G +PPPP PP
Sbjct: 1342 PPPPPPPSDDLTPVPPPPPPPPTMSKAPT---------GVPLPVPPPPPLFSPSMILPPP 1392
Query: 928 PP 933
PP
Sbjct: 1393 PP 1394
Score = 24.6 bits (51), Expect(2) = 6.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 921 PSPPXGGPXPP 953
P PP GGP PP
Sbjct: 1603 PPPPNGGPPPP 1613
Score = 22.2 bits (45), Expect(2) = 6.6
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 756 QXPPXXXGGPRPXQXXXPFLXPP 824
Q PP GGP P P PP
Sbjct: 1583 QGPPPLMGGPPPRLGMPPPGPPP 1605
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 4/77 (5%)
Frame = +1
Query: 733 GKXXXPPPXX----PPXXLGXPAPAKXXPPFXNPRXXTLXXSGXXXXGXGFXLPPPPXXX 900
G PPP PP G P P PP +P S PPPP
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPP----PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 306
Query: 901 XXXGXGXPPPPXGAXXP 951
G PPP G P
Sbjct: 307 PPTG-SLPPPQAGGSPP 322
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 880 PPPPXXXXXXGXGXPPPPXGAXXP 951
PPP G G PPPP A P
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSP 264
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 4/77 (5%)
Frame = +1
Query: 733 GKXXXPPPXX----PPXXLGXPAPAKXXPPFXNPRXXTLXXSGXXXXGXGFXLPPPPXXX 900
G PPP PP G P P PP +P S PPPP
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPP----PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 327
Query: 901 XXXGXGXPPPPXGAXXP 951
G PPP G P
Sbjct: 328 PPTG-SLPPPQAGGSPP 343
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 880 PPPPXXXXXXGXGXPPPPXGAXXP 951
PPP G G PPPP A P
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSP 285
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 4/77 (5%)
Frame = +1
Query: 733 GKXXXPPPXX----PPXXLGXPAPAKXXPPFXNPRXXTLXXSGXXXXGXGFXLPPPPXXX 900
G PPP PP G P P PP +P S PPPP
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPP----PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 312
Query: 901 XXXGXGXPPPPXGAXXP 951
G PPP G P
Sbjct: 313 PPTG-SLPPPQAGGSPP 328
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 880 PPPPXXXXXXGXGXPPPPXGAXXP 951
PPP G G PPPP A P
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSP 270
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical protein
C33B4.3b protein.
Length = 993
Score = 28.7 bits (61), Expect = 6.5
Identities = 23/99 (23%), Positives = 31/99 (31%), Gaps = 7/99 (7%)
Frame = +1
Query: 658 PXXXGKTPPXLXXXPHRENKNXXXRGKXXX-------PPPXXPPXXLGXPAPAKXXPPFX 816
P KTPP H+ ++N + + P P P P PP
Sbjct: 717 PTSRPKTPPPPPPMQHQNHQNHQYQQQHPSLPRSASTPQPIQQQQSSIPPPPPPPPPPHC 776
Query: 817 NPRXXTLXXSGXXXXGXGFXLPPPPXXXXXXGXGXPPPP 933
P + + +PPPP G PPPP
Sbjct: 777 EPTMVHVEFTPPSTSS----VPPPPPPLPPISSGAPPPP 811
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +2
Query: 785 PPXPXXXPLSXTPEXTHXFXRGXXXXAXGXSSPPPPXXXXXXGXXPLPPPXGP 943
PP P P P H PPPP G P PPP P
Sbjct: 766 PPPPPPPPPHCEPTMVHV--EFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein
C33B4.3a protein.
Length = 1110
Score = 28.7 bits (61), Expect = 6.5
Identities = 23/99 (23%), Positives = 31/99 (31%), Gaps = 7/99 (7%)
Frame = +1
Query: 658 PXXXGKTPPXLXXXPHRENKNXXXRGKXXX-------PPPXXPPXXLGXPAPAKXXPPFX 816
P KTPP H+ ++N + + P P P P PP
Sbjct: 717 PTSRPKTPPPPPPMQHQNHQNHQYQQQHPSLPRSASTPQPIQQQQSSIPPPPPPPPPPHC 776
Query: 817 NPRXXTLXXSGXXXXGXGFXLPPPPXXXXXXGXGXPPPP 933
P + + +PPPP G PPPP
Sbjct: 777 EPTMVHVEFTPPSTSS----VPPPPPPLPPISSGAPPPP 811
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +2
Query: 785 PPXPXXXPLSXTPEXTHXFXRGXXXXAXGXSSPPPPXXXXXXGXXPLPPPXGP 943
PP P P P H PPPP G P PPP P
Sbjct: 766 PPPPPPPPPHCEPTMVHV--EFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPP 816
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 561 PKKXPPXXPKKTPPPXIXXPFRKXXXPPXLXPPPXXGENPP 683
P PP P PP + P PP PPP PP
Sbjct: 27 PPPCPPPPPPMCAPPPLPCP-PPPICPPQFCPPPPMCPPPP 66
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 951 GXXGPXGGGRGXXPXXXXXXGGGGEXKP 868
G G GGG G P GGGG +P
Sbjct: 199 GGSGGSGGGSGRFPPPPPPYGGGGRRRP 226
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/87 (24%), Positives = 23/87 (26%), Gaps = 2/87 (2%)
Frame = +3
Query: 597 PPPXIXXPFRKXXXPPXLXPPPXXGENPPXXXXXXXXXXXXXXXXXXXXX--PPPQXPPX 770
PP P P PPP G PP PPP PP
Sbjct: 125 PPQAAPSPGGPMQPPHGFAPPPMGGGVPPEMMNHQAYQAQMRQQQQQPNGQAPPPVYPPF 184
Query: 771 XXGGPRPXQXXXPFLXPPXXHTXXXGG 851
P+ P+ PP GG
Sbjct: 185 GQPAPQMSGQRMPYPYPPQGMPGYPGG 211
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/65 (26%), Positives = 18/65 (27%)
Frame = +3
Query: 747 PPPQXPPXXXGGPRPXQXXXPFLXPPXXHTXXXGGXXGGRGVXXXXXXXXXXXXGGXXPS 926
PPP PP G P P P GG GG P+
Sbjct: 31 PPPPPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAPCAAAPIAAPAGGYATAPA 90
Query: 927 PPXGG 941
P GG
Sbjct: 91 APVGG 95
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/65 (26%), Positives = 18/65 (27%)
Frame = +3
Query: 747 PPPQXPPXXXGGPRPXQXXXPFLXPPXXHTXXXGGXXGGRGVXXXXXXXXXXXXGGXXPS 926
PPP PP G P P P GG GG P+
Sbjct: 31 PPPPPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAPCAAAPIAAPAGGYATAPA 90
Query: 927 PPXGG 941
P GG
Sbjct: 91 APVGG 95
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/68 (30%), Positives = 22/68 (32%)
Frame = -2
Query: 950 GXWAPXGGGGXPXPXXXXXXGGGGRXNPXPXXXXPXXXSVXXRGXKKGGXXLAGAGXPXX 771
G W GGGG GGGGR G +GG G G
Sbjct: 70 GGWGNNGGGGNWGGNGGGGNGGGGRGG-----GGGGGGGRGGGGGGRGGGGGGGGGRGGG 124
Query: 770 XGGXLGGG 747
GG GGG
Sbjct: 125 GGGRGGGG 132
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/53 (28%), Positives = 17/53 (32%)
Frame = +2
Query: 785 PPXPXXXPLSXTPEXTHXFXRGXXXXAXGXSSPPPPXXXXXXGXXPLPPPXGP 943
PP P + P G + PPPP G P PPP P
Sbjct: 203 PPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 255
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/53 (28%), Positives = 17/53 (32%)
Frame = +2
Query: 785 PPXPXXXPLSXTPEXTHXFXRGXXXXAXGXSSPPPPXXXXXXGXXPLPPPXGP 943
PP P + P G + PPPP G P PPP P
Sbjct: 189 PPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/53 (28%), Positives = 17/53 (32%)
Frame = +2
Query: 785 PPXPXXXPLSXTPEXTHXFXRGXXXXAXGXSSPPPPXXXXXXGXXPLPPPXGP 943
PP P + P G + PPPP G P PPP P
Sbjct: 189 PPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.149 0.511
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,082,126
Number of Sequences: 27780
Number of extensions: 267820
Number of successful extensions: 1365
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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