Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_I18
         (901 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001821-1|AAN71576.1|  144|Drosophila melanogaster RH42446p pro...   121   1e-27
AY122154-1|AAM52666.1|  155|Drosophila melanogaster LD07740p pro...   121   1e-27
AE013599-2640|AAM68182.1|  144|Drosophila melanogaster CG5134-PC...   121   1e-27
AE013599-2639|AAF57734.3|  175|Drosophila melanogaster CG5134-PB...    72   9e-13

>BT001821-1|AAN71576.1|  144|Drosophila melanogaster RH42446p
           protein.
          Length = 144

 Score =  121 bits (292), Expect = 1e-27
 Identities = 51/92 (55%), Positives = 77/92 (83%)
 Frame = +1

Query: 265 LTVEDVDVDFLPIVYDIIRSVERDFHDNASKIRESHECSHRVLELQKRLEIAKAQIRRLP 444
           LTV+ +D++ LPI+YDI+R VE+D  +NA K+RES +C+H++ ELQKR E A+ QIR+LP
Sbjct: 50  LTVDQLDIEILPIIYDIVRCVEKDPLENAVKLRESQDCNHKIFELQKRFESAREQIRQLP 109

Query: 445 GIEFNKHDQLKQFELLRTQLRLKRELLQKYRN 540
           GI+FNK +Q ++ ELLR QL+LK++L++KY++
Sbjct: 110 GIDFNKEEQQQRLELLRNQLKLKQQLIRKYKD 141


>AY122154-1|AAM52666.1|  155|Drosophila melanogaster LD07740p
           protein.
          Length = 155

 Score =  121 bits (292), Expect = 1e-27
 Identities = 51/92 (55%), Positives = 77/92 (83%)
 Frame = +1

Query: 265 LTVEDVDVDFLPIVYDIIRSVERDFHDNASKIRESHECSHRVLELQKRLEIAKAQIRRLP 444
           LTV+ +D++ LPI+YDI+R VE+D  +NA K+RES +C+H++ ELQKR E A+ QIR+LP
Sbjct: 61  LTVDQLDIEILPIIYDIVRCVEKDPLENAVKLRESQDCNHKIFELQKRFESAREQIRQLP 120

Query: 445 GIEFNKHDQLKQFELLRTQLRLKRELLQKYRN 540
           GI+FNK +Q ++ ELLR QL+LK++L++KY++
Sbjct: 121 GIDFNKEEQQQRLELLRNQLKLKQQLIRKYKD 152


>AE013599-2640|AAM68182.1|  144|Drosophila melanogaster CG5134-PC,
           isoform C protein.
          Length = 144

 Score =  121 bits (292), Expect = 1e-27
 Identities = 51/92 (55%), Positives = 77/92 (83%)
 Frame = +1

Query: 265 LTVEDVDVDFLPIVYDIIRSVERDFHDNASKIRESHECSHRVLELQKRLEIAKAQIRRLP 444
           LTV+ +D++ LPI+YDI+R VE+D  +NA K+RES +C+H++ ELQKR E A+ QIR+LP
Sbjct: 50  LTVDQLDIEILPIIYDIVRCVEKDPLENAVKLRESQDCNHKIFELQKRFESAREQIRQLP 109

Query: 445 GIEFNKHDQLKQFELLRTQLRLKRELLQKYRN 540
           GI+FNK +Q ++ ELLR QL+LK++L++KY++
Sbjct: 110 GIDFNKEEQQQRLELLRNQLKLKQQLIRKYKD 141


>AE013599-2639|AAF57734.3|  175|Drosophila melanogaster CG5134-PB,
           isoform B protein.
          Length = 175

 Score = 72.1 bits (169), Expect = 9e-13
 Identities = 38/84 (45%), Positives = 57/84 (67%), Gaps = 5/84 (5%)
 Frame = +3

Query: 570 KMPLRALLKYLANNERIVQKIAESYPVRRAAQLAVSVFYRGK-----EKLSDVDPQKVNK 734
           KM LR L++YLANNE+++Q++AESYP+RRAAQL VS+ YR K     + L ++ P++   
Sbjct: 90  KMVLRLLMRYLANNEQLIQRMAESYPMRRAAQLVVSLMYRTKDLAREQGLHEMTPERFKS 149

Query: 735 FIEF*KGSVQIEGRSTGCKKQLKN 806
           F+   K +V+ E    G KK+L +
Sbjct: 150 FVNMFKNNVRQE--LEGVKKELNS 171



 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 26/49 (53%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
 Frame = +1

Query: 265 LTVEDVDVDFLPIVYDIIRSVERDFHDNASKIRESHECSHR-VLELQKR 408
           LTV+ +D++ LPI+YDI+R VE+D  +NA K+RES +C+H+ VL L  R
Sbjct: 50  LTVDQLDIEILPIIYDIVRCVEKDPLENAVKLRESQDCNHKMVLRLLMR 98


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,266,095
Number of Sequences: 53049
Number of extensions: 604026
Number of successful extensions: 1889
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1889
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)