Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_I18
         (901 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p...    29   6.0  
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ...    29   6.0  

>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
           protein F54D5.14 protein.
          Length = 1130

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = +1

Query: 304 VYDIIRSVERDFHDNASKIRESHECSHRVLELQKRLEIAKAQIRRLPGIEFNKHDQLKQF 483
           V DI+++V     D A  I+E  E  H + E+QK      ++ ++L   E +K+D   + 
Sbjct: 763 VKDILKNVADITADMAPVIQERKEAEHTLAEIQKETRDFASKSQKLQN-ELSKYDDAGEI 821

Query: 484 ELLR 495
             +R
Sbjct: 822 LKIR 825


>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
           protein F54D5.14 protein.
          Length = 1130

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = +1

Query: 304 VYDIIRSVERDFHDNASKIRESHECSHRVLELQKRLEIAKAQIRRLPGIEFNKHDQLKQF 483
           V DI+++V     D A  I+E  E  H + E+QK      ++ ++L   E +K+D   + 
Sbjct: 763 VKDILKNVADITADMAPVIQERKEAEHTLAEIQKETRDFASKSQKLQN-ELSKYDDAGEI 821

Query: 484 ELLR 495
             +R
Sbjct: 822 LKIR 825


>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
            protein Y32H12A.8 protein.
          Length = 3901

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 26/114 (22%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
 Frame = +1

Query: 196  KIVLKICTMENNTDHSEQTNYSPLTVEDVDVDFLPIVYDI-----IR---SVERDFHDNA 351
            K++ K   M+++   SE+  +     ED++V F P   D+      R     ++ +    
Sbjct: 1622 KLMQKCPPMDSDMFSSEEDLFESCQ-EDLNVPFFPETEDVPIIPGTRHPWETDQVYQQRL 1680

Query: 352  SKIRESHECSHRVLELQKRLEIAKAQIRRLPGIEFNKHDQLKQFELLRTQLRLK 513
               R   E +H V   +++ +  + +   +P +EFNKH  + + EL + + +LK
Sbjct: 1681 QAERAEDEAAHVVPVSEEKEKAEEVEDPIVPPVEFNKHTPMMR-ELAKRRRKLK 1733


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,982,795
Number of Sequences: 27780
Number of extensions: 325141
Number of successful extensions: 896
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)