Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_I17
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1203 - 31703512-31703832,31703922-31704351,31704454-317045...    31   1.6  
01_05_0803 + 25364460-25364574,25364882-25365051,25365228-253653...    29   6.5  

>04_04_1203 -
           31703512-31703832,31703922-31704351,31704454-31704551,
           31704661-31704763,31704849-31704934,31705022-31705109,
           31705194-31705358,31705412-31705500,31705622-31705734,
           31707646-31707658
          Length = 501

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -2

Query: 533 ILFYKDVSTEELMDTRGQVVASDLSMKTGNLTINALQVTNKLSE 402
           +LF  D+ +  L DT+G  V  +L  K G +    L+ T KL E
Sbjct: 119 VLFDHDLESYALYDTKGHQVPQELVEKIGKVFETILEETGKLRE 162


>01_05_0803 +
           25364460-25364574,25364882-25365051,25365228-25365317,
           25365488-25365649,25365735-25365817,25366416-25366604,
           25366693-25367071
          Length = 395

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 24/62 (38%), Positives = 33/62 (53%)
 Frame = -2

Query: 587 FENLNTPLTVEEFQVLPLILFYKDVSTEELMDTRGQVVASDLSMKTGNLTINALQVTNKL 408
           F N  T L+ EEF  + L    +D+STE    + GQ V   LS++TG      L VTN+ 
Sbjct: 266 FRNRKT-LSAEEF--VKLKSKDEDISTENSSASGGQNV---LSLRTGQRITAGLPVTNRK 319

Query: 407 SE 402
           S+
Sbjct: 320 SD 321


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,702,200
Number of Sequences: 37544
Number of extensions: 354514
Number of successful extensions: 863
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)