Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_I17
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64857-10|AAC25860.1|  265|Caenorhabditis elegans Hypothetical p...    31   1.4  
Z81552-4|CAB04488.2|  765|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z68493-9|CAA92796.1|  338|Caenorhabditis elegans Hypothetical pr...    28   7.7  
U97403-6|AAB52471.2|  583|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>U64857-10|AAC25860.1|  265|Caenorhabditis elegans Hypothetical
           protein C37C3.3 protein.
          Length = 265

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = +3

Query: 195 SVDQMRQILNEIIDALESPDYASKLDEA 278
           ++D+ R++  EI DA+ +P + + +DEA
Sbjct: 180 NIDEQREVAKEIADAISNPGFNNAIDEA 207


>Z81552-4|CAB04488.2|  765|Caenorhabditis elegans Hypothetical
           protein F56G4.6 protein.
          Length = 765

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 18/70 (25%), Positives = 33/70 (47%)
 Frame = -2

Query: 608 FCKINASFENLNTPLTVEEFQVLPLILFYKDVSTEELMDTRGQVVASDLSMKTGNLTINA 429
           FC + A  +  +T LT+E+F+ LP   F  ++  ++     G    +DL  K   +T  +
Sbjct: 620 FCVLLAEHDKQDTYLTIEDFEKLPKSEFIVEILRKK---DAGNDSLNDLGQKLREITGKS 676

Query: 428 LQVTNKLSEL 399
           +    K + L
Sbjct: 677 MNFEEKHANL 686


>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
            C06B8.7 protein.
          Length = 3118

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 21/67 (31%), Positives = 30/67 (44%)
 Frame = -1

Query: 366  GALLSPFLFAQPWGRLFASFSTSHYQQLL*LHRVWKHNQAIPGRL*FHLVFVAFDRLIRF 187
            GAL+   LFA        + S ++YQ +  L+ +  HN A+     +H   VA D  I  
Sbjct: 2461 GALIKNCLFAYNSNSTALALSGNNYQVITLLNNIISHNFAL-----YHDTIVAHDVAINM 2515

Query: 186  EGTTCFS 166
               T FS
Sbjct: 2516 TRNTLFS 2522


>Z68493-9|CAA92796.1|  338|Caenorhabditis elegans Hypothetical
           protein C33A12.13 protein.
          Length = 338

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
 Frame = -2

Query: 656 YKYLFVTIHN*IV*ILFCKINASFENLNTPLTVEEFQVLPLILFYKDVSTEE---LMDTR 486
           Y Y F  I       +F   N++F  +NT + V    +  ++LF+K     E    + T 
Sbjct: 187 YPYPFGAIWTYYSGAIFGFRNSTFYLVNTVIWVTLATIANIMLFFKITKARERLITVQTS 246

Query: 485 GQVVASDLSMKTGNLTINALQVTNKLSELNY 393
           G    + +S+    + + A  VTN +  LNY
Sbjct: 247 GISHRAQVSITRTTIAMIAFYVTNGMFILNY 277


>U97403-6|AAB52471.2|  583|Caenorhabditis elegans Hypothetical
           protein T10E9.3 protein.
          Length = 583

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +1

Query: 436 MVRLPVFILKSEATTCPLVSISSSVDTSL*NSIKGKTWNSSTVSGVLRFSKLAFILQNNI 615
           M+ +P+ +L  E TT    SI+ + D S   S    +WN   +S  + F   +     N 
Sbjct: 1   MLLVPIILLFLEVTTTHQRSITQNTDCSFHYSNYSVSWNYDELSNDIVFKLKSHSDFTNF 60

Query: 616 YT 621
           YT
Sbjct: 61  YT 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,176,912
Number of Sequences: 27780
Number of extensions: 315517
Number of successful extensions: 758
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)