Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_I16
(939 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.014
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.014
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.014
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.13
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 34 0.13
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 34 0.13
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.13
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 33 0.22
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.29
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.29
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.29
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.29
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 33 0.39
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.39
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 32 0.68
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 32 0.68
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 31 0.90
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.90
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 1.2
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 1.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 1.6
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 30 2.7
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 2.7
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 3.6
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 3.6
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 3.6
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 4.8
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 4.8
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 4.8
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 4.8
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 4.8
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 6.3
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 6.3
AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying de... 29 6.3
AL023838-8|CAL36503.1| 79|Caenorhabditis elegans Hypothetical ... 28 8.4
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 8.4
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 8.4
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 28 8.4
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.5 bits (83), Expect = 0.014
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = +2
Query: 737 SXPXXNPXXPXXQKKKXXPPPPXXXNXXXKXXXXXXXXXXXPGXPPPPXPGXXPPPXPPX 916
S P P PPPP + G PPPP G PPP PP
Sbjct: 246 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG-GSPPPPRAGSPPPPPPPR 304
Query: 917 GXTP 928
G P
Sbjct: 305 GSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.5 bits (83), Expect = 0.014
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = +2
Query: 737 SXPXXNPXXPXXQKKKXXPPPPXXXNXXXKXXXXXXXXXXXPGXPPPPXPGXXPPPXPPX 916
S P P PPPP + G PPPP G PPP PP
Sbjct: 267 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG-GSPPPPRAGSPPPPPPPR 325
Query: 917 GXTP 928
G P
Sbjct: 326 GSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.5 bits (83), Expect = 0.014
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = +2
Query: 737 SXPXXNPXXPXXQKKKXXPPPPXXXNXXXKXXXXXXXXXXXPGXPPPPXPGXXPPPXPPX 916
S P P PPPP + G PPPP G PPP PP
Sbjct: 252 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG-GSPPPPRAGSPPPPPPPR 310
Query: 917 GXTP 928
G P
Sbjct: 311 GSPP 314
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +2
Query: 791 PPPPXXXNXXXKXXXXXXXXXXXPGXPPPPXPG-XXPPPXPPXGXTP 928
P PP + P PPPP G PPP PP G TP
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP 308
Score = 32.7 bits (71), Expect = 0.39
Identities = 24/92 (26%), Positives = 26/92 (28%)
Frame = +2
Query: 638 PTPPPPXRXKKXPXNRXXXXXXKNXSQXGXAPXSXPXXNPXXPXXQKKKXXPPPPXXXNX 817
P PPPP P S+ G P P P + PPPP
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGP-PGMGGMPPPPPPGMRYPGGMPPPPPPRYP 356
Query: 818 XXKXXXXXXXXXXXPGXPPPPXPGXXPPPXPP 913
P PP G PPP PP
Sbjct: 357 SAGPGMYPPPPPSRP-PAPPSGHGMIPPPPPP 387
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/97 (24%), Positives = 25/97 (25%), Gaps = 5/97 (5%)
Frame = +2
Query: 638 PTPPPPXRXKKXPXNRXXXXXXKNXSQXGXAPXSXPXXNPXXPXXQKKKXXPPPPXXXNX 817
P PPPP P + P P P P PP
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRT-----PGPPGMPGM 316
Query: 818 XXKXXXXXXXXXXXPGXPPPP-----XPGXXPPPXPP 913
G PPPP PG PPP PP
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = -1
Query: 927 GVXPXGGXGGGXXPGXGGGGXPG 859
G P GG GGG G GGGG PG
Sbjct: 324 GGGPVGGGGGGAKSGGGGGGIPG 346
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = -1
Query: 927 GVXPXGGXGGGXXPGXGGGGXPG 859
G P GG GGG G GGGG PG
Sbjct: 218 GGGPVGGGGGGAKSGGGGGGIPG 240
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +2
Query: 791 PPPPXXXNXXXKXXXXXXXXXXXPGXPPPPXPG-XXPPPXPPXGXTP 928
P PP + P PPPP G PPP PP G TP
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP 318
Score = 32.7 bits (71), Expect = 0.39
Identities = 24/92 (26%), Positives = 26/92 (28%)
Frame = +2
Query: 638 PTPPPPXRXKKXPXNRXXXXXXKNXSQXGXAPXSXPXXNPXXPXXQKKKXXPPPPXXXNX 817
P PPPP P S+ G P P P + PPPP
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGP-PGMGGMPPPPPPGMRYPGGMPPPPPPRYP 366
Query: 818 XXKXXXXXXXXXXXPGXPPPPXPGXXPPPXPP 913
P PP G PPP PP
Sbjct: 367 SAGPGMYPPPPPSRP-PAPPSGHGMIPPPPPP 397
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/97 (24%), Positives = 25/97 (25%), Gaps = 5/97 (5%)
Frame = +2
Query: 638 PTPPPPXRXKKXPXNRXXXXXXKNXSQXGXAPXSXPXXNPXXPXXQKKKXXPPPPXXXNX 817
P PPPP P + P P P P PP
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRT-----PGPPGMPGM 326
Query: 818 XXKXXXXXXXXXXXPGXPPPP-----XPGXXPPPXPP 913
G PPPP PG PPP PP
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 33.5 bits (73), Expect = 0.22
Identities = 25/97 (25%), Positives = 27/97 (27%), Gaps = 6/97 (6%)
Frame = +2
Query: 641 TPPPPXRXKKXPXNRXXXXXXKNXSQXGXAPXSXPXXNPXXPXXQKKKXXPPPPXXXNXX 820
TPPPP P + Q P S P PPPP +
Sbjct: 723 TPPPPP-----PMQHQNHQNHQYQQQHPSLPRSASTPQPIQQQQSSIPPPPPPPPPPHCE 777
Query: 821 XKXXXXXXXXXXXPGXPPPPXP------GXXPPPXPP 913
PPPP P G PPP PP
Sbjct: 778 PTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPP 814
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 33.5 bits (73), Expect = 0.22
Identities = 25/97 (25%), Positives = 27/97 (27%), Gaps = 6/97 (6%)
Frame = +2
Query: 641 TPPPPXRXKKXPXNRXXXXXXKNXSQXGXAPXSXPXXNPXXPXXQKKKXXPPPPXXXNXX 820
TPPPP P + Q P S P PPPP +
Sbjct: 723 TPPPPP-----PMQHQNHQNHQYQQQHPSLPRSASTPQPIQQQQSSIPPPPPPPPPPHCE 777
Query: 821 XKXXXXXXXXXXXPGXPPPPXP------GXXPPPXPP 913
PPPP P G PPP PP
Sbjct: 778 PTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPP 814
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/66 (28%), Positives = 22/66 (33%)
Frame = +2
Query: 728 APXSXPXXNPXXPXXQKKKXXPPPPXXXNXXXKXXXXXXXXXXXPGXPPPPXPGXXPPPX 907
+P P P P K PP P + + PG P PP P PP
Sbjct: 205 SPSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDP-----PGPPGPPGPPTRRPPG 259
Query: 908 PPXGXT 925
PP T
Sbjct: 260 PPGPPT 265
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.29
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 869 PPPPXPGXXPPPXPP 913
PPPP PG PPP PP
Sbjct: 760 PPPPPPGGCPPPPPP 774
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +2
Query: 755 PXXPXXQKKKXXPPPPXXXNXXXKXXXXXXXXXXXPGXPPPPXPGXXPPPXPPXGXTP 928
P P PPPP PG PP G PPP PP G P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP-PGGLPPISGGPPPPPPPPGGCPP 770
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 7/50 (14%)
Frame = +2
Query: 791 PPPPXXXNXXXKXXXXXXXXXXXPGX----PPPPXPGXX---PPPXPPXG 919
PPPP PG PPPP PG PPP PP G
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 7/53 (13%)
Frame = +2
Query: 791 PPPPXXXNXXXKXXXXXXXXXXXPGXPPPPXP-------GXXPPPXPPXGXTP 928
PPPP G PPPP P G PPP PP P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +2
Query: 791 PPPPXXXNXXXKXXXXXXXXXXXPGXPPPPXPGXXPPPXP 910
PPPP G PPPP PG P P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.29
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 869 PPPPXPGXXPPPXPP 913
PPPP PG PPP PP
Sbjct: 760 PPPPPPGGCPPPPPP 774
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +2
Query: 755 PXXPXXQKKKXXPPPPXXXNXXXKXXXXXXXXXXXPGXPPPPXPGXXPPPXPPXGXTP 928
P P PPPP PG PP G PPP PP G P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP-PGGLPPISGGPPPPPPPPGGCPP 770
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 7/50 (14%)
Frame = +2
Query: 791 PPPPXXXNXXXKXXXXXXXXXXXPGX----PPPPXPGXX---PPPXPPXG 919
PPPP PG PPPP PG PPP PP G
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 7/53 (13%)
Frame = +2
Query: 791 PPPPXXXNXXXKXXXXXXXXXXXPGXPPPPXP-------GXXPPPXPPXGXTP 928
PPPP G PPPP P G PPP PP P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +2
Query: 791 PPPPXXXNXXXKXXXXXXXXXXXPGXPPPPXPGXXPPPXP 910
PPPP G PPPP PG P P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.29
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 869 PPPPXPGXXPPPXPP 913
PPPP PG PPP PP
Sbjct: 343 PPPPPPGGCPPPPPP 357
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +2
Query: 755 PXXPXXQKKKXXPPPPXXXNXXXKXXXXXXXXXXXPGXPPPPXPGXXPPPXPPXGXTP 928
P P PPPP PG PP G PPP PP G P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP-PGGLPPISGGPPPPPPPPGGCPP 353
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 7/50 (14%)
Frame = +2
Query: 791 PPPPXXXNXXXKXXXXXXXXXXXPGX----PPPPXPGXX---PPPXPPXG 919
PPPP PG PPPP PG PPP PP G
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 7/53 (13%)
Frame = +2
Query: 791 PPPPXXXNXXXKXXXXXXXXXXXPGXPPPPXP-------GXXPPPXPPXGXTP 928
PPPP G PPPP P G PPP PP P
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +2
Query: 791 PPPPXXXNXXXKXXXXXXXXXXXPGXPPPPXPGXXPPPXP 910
PPPP G PPPP PG P P
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 32.7 bits (71), Expect = 0.39
Identities = 28/92 (30%), Positives = 29/92 (31%), Gaps = 2/92 (2%)
Frame = +2
Query: 644 PPPPXRXKKXPXNRXXXXXXKNXSQXGXAPXSX--PXXNPXXPXXQKKKXXPPPPXXXNX 817
PPPP P + G AP S P P P PPPP
Sbjct: 504 PPPPPLLGIAPMSTNAPPPPP---MPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLD 560
Query: 818 XXKXXXXXXXXXXXPGXPPPPXPGXXPPPXPP 913
K PG PPPP PPP PP
Sbjct: 561 LLKGAVAGLKSV--PGGPPPP-----PPPPPP 585
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 32.7 bits (71), Expect = 0.39
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 860 PGXPPPPXPGXXPPPXPPXG 919
P PPPP G PPP PP G
Sbjct: 578 PPPPPPPMLGGPPPPPPPPG 597
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 3/23 (13%)
Frame = +2
Query: 860 PGXPPPPXP---GXXPPPXPPXG 919
P PPPP P G PPP PP G
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPPGG 598
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 4/58 (6%)
Frame = +2
Query: 752 NPXXPXXQKKKXXPPPPXXXNXXXKXXXXXXXXXXXPGXPPPPXP----GXXPPPXPP 913
+P P PPPP P PPPP P G PPP PP
Sbjct: 529 DPPRPAPPPVSSIPPPPPIAGLLAANGTNVPI----PPPPPPPLPQNLSGAPPPPPPP 582
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 31.9 bits (69), Expect = 0.68
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 869 PPPPXPGXXPPPXPPXGXTP 928
PPPP P PPP PP P
Sbjct: 3 PPPPPPPPPPPPPPPAASAP 22
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 869 PPPPXPGXXPPPXPP 913
PPPP P PPP PP
Sbjct: 2 PPPPPPPPPPPPPPP 16
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 31.9 bits (69), Expect = 0.68
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 869 PPPPXPGXXPPPXPPXGXTP 928
PPPP P PPP PP P
Sbjct: 3 PPPPPPPPPPPPPPPAASAP 22
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 869 PPPPXPGXXPPPXPP 913
PPPP P PPP PP
Sbjct: 2 PPPPPPPPPPPPPPP 16
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 31.5 bits (68), Expect = 0.90
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +2
Query: 791 PPPPXXXNXXXKXXXXXXXXXXXPGX--PPPPXPGXXPPPXPPXGXTP 928
PPPP + + P PP P P PPP PP TP
Sbjct: 326 PPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPPPPQTP 373
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.90
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 860 PGXPPPPXPGXXPPPXPP 913
P PPPP P PPP PP
Sbjct: 63 PPPPPPPPPPMCPPPPPP 80
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/59 (28%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Frame = +2
Query: 755 PXXPXXQKKKXXPPP-PXXXNXXXKXXXXXXXXXXXPGXPPPPXPGXXPPPXPPXGXTP 928
P P PPP P P PPPP P PPP P +P
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 863 GXPPPPXPGXXPPPXPP 913
G PPPP G PPP PP
Sbjct: 788 GIPPPPPLGIIPPPPPP 804
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 863 GXPPPPXPGXXPPPXPP 913
G PPPP G PPP PP
Sbjct: 788 GIPPPPPLGIIPPPPPP 804
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 869 PPPPXPGXXPPPXPPXG 919
PPPP G PPP PP G
Sbjct: 106 PPPPMFGAPPPPPPPSG 122
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 869 PPPPXPGXXPPPXP 910
PPPP PG PPP P
Sbjct: 75 PPPPGPGGIPPPPP 88
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 869 PPPPXPGXXPPPXPPXGXTP 928
PPPP G PPP P G P
Sbjct: 96 PPPPMMGGIPPPPPMFGAPP 115
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +2
Query: 860 PGXPPPPXP---GXXPPPXPPXGXTP 928
PG PPP P G PPP P G P
Sbjct: 80 PGGIPPPPPMFAGGIPPPPPMMGGIP 105
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 3/62 (4%)
Frame = +2
Query: 638 PTPPPPXRXKKXPXNRXXXXXXKNX---SQXGXAPXSXPXXNPXXPXXQKKKXXPPPPXX 808
P PPPP R + P R S P + P P P PPPP
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPR 197
Query: 809 XN 814
N
Sbjct: 198 LN 199
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/64 (28%), Positives = 19/64 (29%), Gaps = 2/64 (3%)
Frame = +2
Query: 743 PXXNPXXPXXQKKKXXPPPPXXXNXXXKXXXXXXXXXXXPGXPPPPX--PGXXPPPXPPX 916
P + P K PPP N P P PP P PPP PP
Sbjct: 459 PSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPP 518
Query: 917 GXTP 928
P
Sbjct: 519 PPPP 522
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/102 (22%), Positives = 28/102 (27%), Gaps = 6/102 (5%)
Frame = +2
Query: 632 GXPTPPPPXRXKKXPXNRXXXXXXKNXSQXGXAPXSXPXXNPXXPXXQ--KKKXXPPPPX 805
G P PPP + + +P P P + + PPPP
Sbjct: 104 GTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPK 163
Query: 806 XXNXXXKXXXXXXXXXXXPGX----PPPPXPGXXPPPXPPXG 919
G PPPP G PP PP G
Sbjct: 164 GTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTG 205
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/103 (22%), Positives = 28/103 (27%), Gaps = 7/103 (6%)
Frame = +2
Query: 632 GXPTPPPPXRXKKXPXNRXXXXXXKNXSQXGXAPXSXPXXNPXXPXXQK---KKXXPPPP 802
G P PPP + + P P P ++ + PPPP
Sbjct: 41 GTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPP 100
Query: 803 XXXNXXXKXXXXXXXXXXXPGX----PPPPXPGXXPPPXPPXG 919
G PPPP G PP PP G
Sbjct: 101 KGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTG 143
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/102 (22%), Positives = 27/102 (26%), Gaps = 6/102 (5%)
Frame = +2
Query: 632 GXPTPPPPXRXKKXPXNRXXXXXXKNXSQXGXAPXSXPXXNPXXPXXQ--KKKXXPPPPX 805
G P PPP + + P P P + + PPPP
Sbjct: 166 GSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPK 225
Query: 806 XXNXXXKXXXXXXXXXXXPGX----PPPPXPGXXPPPXPPXG 919
G PPPP G PP PP G
Sbjct: 226 GTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTG 267
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/103 (23%), Positives = 27/103 (26%), Gaps = 7/103 (6%)
Frame = +2
Query: 632 GXPTPPPPXRXKKXPXNRXXXXXXKNXSQXGXA-PXSXPXXNPXXPXXQ--KKKXXPPPP 802
G P PPP + G P P P + + PPPP
Sbjct: 72 GTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPP 131
Query: 803 XXXNXXXKXXXXXXXXXXXPGX----PPPPXPGXXPPPXPPXG 919
G PPPP G PP PP G
Sbjct: 132 KGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTG 174
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 869 PPPPXPGXXPPPXPPXG 919
PPPP G PP PP G
Sbjct: 33 PPPPPKGTGTPPPPPTG 49
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 869 PPPPXPGXXPPPXPP 913
PPPP P PPP PP
Sbjct: 135 PPPPSPPPPPPPPPP 149
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/61 (32%), Positives = 22/61 (36%)
Frame = -1
Query: 912 GGXGGGXXPGXGGGGXPGXXXXXKXXXXXXXXXFXXXGGGGXFFFFWXXGXXGFXXGXEX 733
GG GGG G GGGG G F GGGG + G G+ G
Sbjct: 155 GGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGF---GGGGMGGYGGGMGGGGYGGGGMG 211
Query: 732 G 730
G
Sbjct: 212 G 212
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 3/26 (11%)
Frame = -1
Query: 927 GVXPXGGXGGGXXPGXG---GGGXPG 859
G P GG GGG PG G GGG G
Sbjct: 222 GYGPSGGYGGGYGPGGGYGMGGGGGG 247
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = -1
Query: 912 GGXGGGXXPGXGGGGXPGXXXXXKXXXXXXXXXFXXXGGGGXFFFFWXXGXXG 754
GG GGG G GGGG G + GGGG F + G G
Sbjct: 122 GGDGGGGYGGYGGGGYGGMGG---GPGGYGMGGYGGGGGGGGDFGGYGGGGMG 171
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 869 PPPPXPGXXPPPXPPXGXTP 928
PPP PG PPP P G P
Sbjct: 176 PPPGMPGAYPPPRMPIGHGP 195
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 869 PPPPXPGXXPPPXPPXGXTP 928
PPP PG PPP P G P
Sbjct: 176 PPPGMPGAYPPPRMPIGHGP 195
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 869 PPPPXPGXXPPPXPP 913
PPPP P PPP PP
Sbjct: 243 PPPPSPVCMPPPPPP 257
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 869 PPPPXPGXXPPPXPP 913
PPPP P PPP PP
Sbjct: 73 PPPPPPMPCPPPPPP 87
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 860 PGXPPPPXPGXXPPPXPPXGXTP 928
P PPPP P PPP P P
Sbjct: 72 PPPPPPPMPCPPPPPPMPRPSCP 94
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 918 PXGGXGGGXXPGXGGGG 868
P GG GGG P GGGG
Sbjct: 318 PAGGGGGGDFPAGGGGG 334
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 860 PGXPPPPXPGXXPPPXPPXGXTP 928
P PPPP P P P P TP
Sbjct: 637 PQPPPPPSPSPEPEPEPKPPVTP 659
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 860 PGXPPPPXPGXXPPPXPPXG 919
PG PPPP G PPP P G
Sbjct: 787 PGAPPPP--GMRPPPGAPGG 804
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 860 PGXPPPPXPGXXPPPXPPXG 919
PG PPPP G PPP P G
Sbjct: 787 PGAPPPP--GMRPPPGAPGG 804
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 869 PPPPXPGXXPPPXPP 913
PPPP G PPP PP
Sbjct: 42 PPPPMCGCAPPPPPP 56
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 860 PGXPPPPXPGXXPPPXPPXG 919
PG PPPP G PPP P G
Sbjct: 787 PGAPPPP--GMRPPPGAPGG 804
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 860 PGXPPPPXPGXXPPPXPPXG 919
PG PPPP G PPP P G
Sbjct: 787 PGAPPPP--GMRPPPGAPGG 804
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 872 PPPXPGXXPPPXPPXGXTP 928
PPP P PPP PP P
Sbjct: 134 PPPTPAAPPPPPPPPPPAP 152
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/52 (30%), Positives = 16/52 (30%), Gaps = 2/52 (3%)
Frame = +2
Query: 764 PXXQKKKXXPPPPXXXNXXXKXXXXXXXXXXXPGXPPPPX--PGXXPPPXPP 913
P K PPP N P P PP P PPP PP
Sbjct: 459 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPP 510
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/58 (27%), Positives = 16/58 (27%)
Frame = +2
Query: 755 PXXPXXQKKKXXPPPPXXXNXXXKXXXXXXXXXXXPGXPPPPXPGXXPPPXPPXGXTP 928
P P Q P PP P PPPP PP PP P
Sbjct: 98 PPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPAP 155
>AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying
defective protein 4,isoform a protein.
Length = 780
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 912 GGXGGGXXPGXGGGGXPG 859
GG GGG G GGG PG
Sbjct: 11 GGGGGGGASGGAGGGAPG 28
>AL023838-8|CAL36503.1| 79|Caenorhabditis elegans Hypothetical
protein Y43C5A.7 protein.
Length = 79
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 918 PXGGXGGGXXPGXGGGG 868
P GG GGG G GGGG
Sbjct: 43 PYGGMGGGPYGGMGGGG 59
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 860 PGXPPPPXPGXXPPPXPP 913
P PPPP P PP PP
Sbjct: 85 PPPPPPPPPTLKAPPPPP 102
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 4/27 (14%)
Frame = +2
Query: 860 PGXPPP-PXPGXXPPP---XPPXGXTP 928
PG PP P PG PPP PP G P
Sbjct: 713 PGYPPAPPPPGVGPPPPQGIPPMGFDP 739
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 918 PXGGXGGGXXPGXGGGG 868
P GG GGG G GGGG
Sbjct: 51 PKGGSGGGQRGGGGGGG 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,012,673
Number of Sequences: 27780
Number of extensions: 171373
Number of successful extensions: 2850
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1938
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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