Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_I15
(955 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 33 0.44
02_05_0584 - 30135768-30135790,30136104-30136866 33 0.44
03_05_0928 + 28888405-28889121 32 0.59
07_01_0080 + 587674-588510 30 0.82
01_06_1402 + 37052996-37053449,37053533-37053630,37053718-370538... 31 1.0
11_06_0202 - 21184217-21184503,21184622-21184982 30 2.4
06_01_1176 + 10112257-10113126 30 2.4
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 30 3.1
01_05_0230 + 19543410-19543722,19544165-19544238 29 4.1
06_01_0747 - 5587261-5587356,5587472-5587855,5588133-5588192,558... 29 5.5
08_01_0207 - 1647168-1647251,1647583-1647726,1648176-1648287,164... 29 7.2
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600... 29 7.2
01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982 29 7.2
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 9.5
07_03_0949 - 22826372-22826542,22827067-22827239,22828179-22828455 28 9.5
06_03_0424 - 20648938-20649564,20650588-20650902 28 9.5
02_05_0686 - 30900748-30902167,30903442-30904742 28 9.5
02_02_0543 + 11360514-11361350,11361434-11361559,11361648-113619... 28 9.5
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 32.7 bits (71), Expect = 0.44
Identities = 25/92 (27%), Positives = 25/92 (27%)
Frame = +3
Query: 630 GRNPXXXPLPXXXPXGPGPXXXXPXXSXXXXXGXPXPXXGXXXXPXRFPGGXXPXGPFPX 809
G P P P P P P S P P P G P P P
Sbjct: 315 GAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPP 374
Query: 810 SXAXPPXGXXPXPAXXXFXXXRGGXXXXXPPP 905
A G P PA GG PPP
Sbjct: 375 GAAGRGGGGPPPPALP------GGPRARGPPP 400
Score = 29.9 bits (64), Expect = 3.1
Identities = 27/100 (27%), Positives = 29/100 (29%), Gaps = 1/100 (1%)
Frame = +3
Query: 639 PXXXPLPXXXPXGPGPXXXXPXXSXXXXXGXPXPXXGXXXXPXRFPGGXXPXGPFPXSXA 818
P PLP G G P + P P G P P P + A
Sbjct: 303 PPPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGA---GSGPPPPPPPAAPA 359
Query: 819 XP-PXGXXPXPAXXXFXXXRGGXXXXXPPPXPSXXXRGXG 935
P P G P P RGG PPP R G
Sbjct: 360 APRPPGPGPGPPPPPGAAGRGGG--GPPPPALPGGPRARG 397
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/92 (27%), Positives = 25/92 (27%), Gaps = 1/92 (1%)
Frame = +3
Query: 678 PGPXXXXPXXSXXXXXGXPXPXXGXXXXPXRFPGGXXPXGPFPX-SXAXPPXGXXPXPAX 854
P P P G P P P P P P P S A G P P
Sbjct: 303 PPPHPLPPGAGAGAGTGAPPP-------PPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPP 355
Query: 855 XXFXXXRGGXXXXXPPPXPSXXXRGXGXXXXP 950
R PPP P RG G P
Sbjct: 356 AAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPP 387
>02_05_0584 - 30135768-30135790,30136104-30136866
Length = 261
Score = 32.7 bits (71), Expect = 0.44
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +1
Query: 226 PXXGAGXPXDRGRXGAPTXRPXWXVWGQPXXPVRGVEPLFXXEXXGFPXPXXVPLXXXGS 405
P G P G G P P P P G P FP P +PL GS
Sbjct: 78 PAGAGGAPPSAGSGGFPFPLPFPLPLPAPGSPAAGAPPSSGSSGFPFPMPSPLPLPAHGS 137
Query: 406 GGXG 417
G
Sbjct: 138 PAAG 141
>03_05_0928 + 28888405-28889121
Length = 238
Score = 32.3 bits (70), Expect = 0.59
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 400 GSGGXGGXGXRXNXSATARGGGXCXLGAXP 489
GSGG G G S+T RGGG +G P
Sbjct: 190 GSGGPGAGGGAQTSSSTTRGGGDVGVGLSP 219
>07_01_0080 + 587674-588510
Length = 278
Score = 29.9 bits (64), Expect(2) = 0.82
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 461 PPRAVADXLXRXPXPPXPPDP 399
PPR D + R P PP PP P
Sbjct: 79 PPRLGGDGMFRRPPPPPPPPP 99
Score = 20.6 bits (41), Expect(2) = 0.82
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -3
Query: 425 PXPPXPPDPXXXR 387
P PP PP P R
Sbjct: 113 PPPPPPPPPLFTR 125
>01_06_1402 +
37052996-37053449,37053533-37053630,37053718-37053888,
37054017-37054117,37054928-37055063,37055155-37055205,
37055311-37055598,37055896-37056130,37056408-37056523,
37057300-37057496,37057739-37057745
Length = 617
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 464 PPPRAVADXLXRXPXPPXPPDPXXXRGTXXGXGNP 360
PPP A A P PP PP P R G P
Sbjct: 83 PPPAAAAANAEAKPQPPPPPPPARTRRRDSDGGRP 117
>11_06_0202 - 21184217-21184503,21184622-21184982
Length = 215
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 482 APKXQXPPPRAVADXLXRXPXPPXPPDPXXXRGTXXGXG 366
APK PPP L P PP PP RG G G
Sbjct: 164 APKPSSPPPFTSPSPL---PPPPPPPTSHGARGATMGIG 199
>06_01_1176 + 10112257-10113126
Length = 289
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 367 PXPXXVPLXXXGSGGXGGXGXRXNXSATARGGG 465
P P G GG GG G R + SA + GGG
Sbjct: 85 PAPPPSSSFTGGGGGGGGCGHRDSKSARSAGGG 117
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 482 APKXQXPPPRAVADXLXRXPXPPXPPDP 399
AP PPP + + P PP PP+P
Sbjct: 330 APPPPPPPPSRFNNTTPKPPPPPPPPEP 357
>01_05_0230 + 19543410-19543722,19544165-19544238
Length = 128
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 625 KGAETPKXXRCRXXXPXGPAPXXXPPPXRXP 717
+GA P RCR PAP PPP P
Sbjct: 45 EGAAHPLRLRCRRRPSPPPAPPSTPPPASPP 75
>06_01_0747 -
5587261-5587356,5587472-5587855,5588133-5588192,
5588428-5588484,5588663-5588800,5588901-5588966,
5589234-5589452,5589522-5589737,5589813-5589884,
5589952-5590205,5590356-5590525,5590840-5591029,
5592211-5592331,5592838-5592921,5593003-5593365,
5594530-5594724,5594938-5595933,5596329-5596370
Length = 1240
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/58 (29%), Positives = 22/58 (37%)
Frame = -3
Query: 482 APKXQXPPPRAVADXLXRXPXPPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTGXXG 309
+P P P AVA P PP PP + G G+ S G++ G G
Sbjct: 14 SPPGGFPTPTAVAPRRRAPPPPPPPPADADAASSSRGPGDDEGS-GRAGASQEAGGGG 70
>08_01_0207 -
1647168-1647251,1647583-1647726,1648176-1648287,
1648392-1648573,1648649-1648780,1648900-1649856,
1649949-1650734
Length = 798
Score = 28.7 bits (61), Expect = 7.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 508 GPAXGEXXGPPXGXPPPPXP 449
GP+ G PP PPPP P
Sbjct: 499 GPSNGSAANPPKPPPPPPPP 518
>01_06_0090 +
26358051-26359157,26359582-26359701,26359968-26360099,
26360194-26360375,26360488-26360602,26362001-26362135,
26362261-26362395
Length = 641
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = -3
Query: 479 PKXQXPPPRAVADXLXRXPXPPXPPDPXXXRGTXXGXGNPXXS 351
P PPP R PP PP P R T G +P S
Sbjct: 270 PPIPPPPPMPALSVCGRAAAPPPPPPPPPARRT-SGAASPAAS 311
>01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982
Length = 301
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 3/62 (4%)
Frame = +3
Query: 738 PXXGXXXXPXRFPG---GXXPXGPFPXSXAXPPXGXXPXPAXXXFXXXRGGXXXXXPPPX 908
P G P PG G G P P G P P+ GG PP
Sbjct: 64 PGHGGTTTPTPIPGHHGGGGSSGTTPSHGGGPSGGALPSPSHGGAAPSHGGGYGASPPVT 123
Query: 909 PS 914
PS
Sbjct: 124 PS 125
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 9.5
Identities = 19/77 (24%), Positives = 24/77 (31%)
Frame = -3
Query: 464 PPPRAVADXLXRXPXPPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTGXXGXPHTXXSG 285
PPP + + L P PP PP P + P N P P + +
Sbjct: 589 PPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNR 648
Query: 284 LXVGAPXRPRSXGXPAP 234
L P PAP
Sbjct: 649 LVPPPPAPGIGNKFPAP 665
>07_03_0949 - 22826372-22826542,22827067-22827239,22828179-22828455
Length = 206
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 431 RXPXPPXPPDPXXXRGTXXGXGN 363
R P PP PPDP R G G+
Sbjct: 84 RPPAPPLPPDPYMDRDMITGRGS 106
>06_03_0424 - 20648938-20649564,20650588-20650902
Length = 313
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 400 GSGGXGGXGXRXNXSATARGGG 465
G GG GG G R + SA GGG
Sbjct: 142 GGGGGGGGGKRRDASADGGGGG 163
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +1
Query: 583 PGFPPRXGGXAXXXKGAETPKXXRCRXXXPX--GPAPXXXPPPXRXPXXXGAPXPXGG 750
P PP+ KG P + P GP+P PPP P P GG
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385
>02_02_0543 +
11360514-11361350,11361434-11361559,11361648-11361976,
11362078-11362861
Length = 691
Score = 28.3 bits (60), Expect = 9.5
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -3
Query: 464 PPPRAVADXLXRXPXPPXPP-DPXXXRGTXXGXG 366
PPP A + + P PP PP P +GT G
Sbjct: 26 PPPLPPAIIIHKDPPPPPPPRQPAAAKGTLDAFG 59
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,505,844
Number of Sequences: 37544
Number of extensions: 401209
Number of successful extensions: 2739
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2470
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2752963900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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