Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_I15
(955 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 37 0.018
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 36 0.032
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 35 0.075
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.17
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 34 0.17
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.17
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 34 0.17
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 33 0.23
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 33 0.23
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 33 0.23
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 33 0.23
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.30
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 33 0.30
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 33 0.40
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 33 0.40
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.40
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.40
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.40
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 33 0.40
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.53
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 32 0.53
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 32 0.70
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 32 0.70
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 31 0.92
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 31 0.92
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 31 0.92
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.2
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 31 1.6
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 31 1.6
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 30 2.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.1
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical pr... 30 2.8
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 2.8
AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen prot... 30 2.8
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 29 4.9
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.9
U41624-5|AAF99941.1| 314|Caenorhabditis elegans Collagen protei... 29 4.9
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 4.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.5
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 6.5
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 6.5
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 29 6.5
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 28 8.6
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 28 8.6
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 28 8.6
AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen prot... 28 8.6
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 28 8.6
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 37.1 bits (82), Expect = 0.018
Identities = 27/96 (28%), Positives = 33/96 (34%), Gaps = 2/96 (2%)
Frame = -3
Query: 494 GGGXAPKXQXPPPRAVADXLXRXPXPPXPPDPXXXRGTXXGXGN--PXXSXXNRGSTPRT 321
G AP PP++ + L P P PP P G G+ P + G
Sbjct: 122 GAPGAPGHPGKPPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGPPGHDGPNGGP 181
Query: 320 GXXGXPHTXXSGLXVGAPXRPRSXGXPAPXXGSXFP 213
G G P G P +P S G P P S P
Sbjct: 182 GQPGQPGPHGPN---GHPGKPGSQGPPGPPGHSDEP 214
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 36.3 bits (80), Expect = 0.032
Identities = 39/169 (23%), Positives = 45/169 (26%), Gaps = 1/169 (0%)
Frame = -3
Query: 749 PPXGXGAPXXXGXRXGGGXXXGAGPXGXXXRQRXXXGVSAPLXXXAX-PPXRGGNPGXXG 573
P G P G G G G +Q P PP G PG G
Sbjct: 94 PQGPQGTPGKPGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGPPGQPGIPG 153
Query: 572 XRDSPPXXXXXXXXXGXAXXXRXRXXGGGXAPKXQXPPPRAVADXLXRXPXPPXPPDPXX 393
+ PP + G P Q P P P PP P
Sbjct: 154 D-NGPPGEQGPKGPDAAPGEPGPKGPIGPPGPPGQAGAPGEPGSPAKSEPAVPGPPGPPG 212
Query: 392 XRGTXXGXGNPXXSXXNRGSTPRTGXXGXPHTXXSGLXVGAPXRPRSXG 246
G G P S G+ G G P T G P +P + G
Sbjct: 213 QAG-QQGPPGPPGSNGIDGAPGAPGAKGEPGTPGEPGKDGEPGKPGTPG 260
Score = 28.3 bits (60), Expect = 8.6
Identities = 24/89 (26%), Positives = 27/89 (30%), Gaps = 4/89 (4%)
Frame = -3
Query: 494 GGGXAPKXQXPPPRAVADXLXRXPXPPXPPDPXXXRGTXXGXGNPXXSXXNRGSTP---- 327
G P Q P A P PP P G G+P S P
Sbjct: 153 GDNGPPGEQGPKGPDAAPGEPGPKGPIGPPGPPGQAGAPGEPGSPAKSEPAVPGPPGPPG 212
Query: 326 RTGXXGXPHTXXSGLXVGAPXRPRSXGXP 240
+ G G P S GAP P + G P
Sbjct: 213 QAGQQGPPGPPGSNGIDGAPGAPGAKGEP 241
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 35.1 bits (77), Expect = 0.075
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Frame = +1
Query: 562 ESRXPXXPGFPPRXGGXAXXXKGAETPKXX-RCRXXXPX--GPAPXXXPPPXRXPXXXGA 732
++R P G PP GG G P+ C+ P GP P PP P G
Sbjct: 1550 QNRGPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGG 1609
Query: 733 PXP 741
P P
Sbjct: 1610 PPP 1612
Score = 29.9 bits (64), Expect = 2.8
Identities = 36/133 (27%), Positives = 40/133 (30%), Gaps = 5/133 (3%)
Frame = -3
Query: 608 PPXRGGNPGXXGXRDSPPXXXXXXXXXGXAXXXRXRXXGGGXAPKXQXPPPRAVADXLXR 429
PP GG+ G R PP G +P PPP R
Sbjct: 1437 PPVMGGHEG--SWRGGPPMRGMPPLGMMRGRGGPPPPRGMN-SPMRGMPPPMRGGGPPMR 1493
Query: 428 XPXPPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTG---XXGXPHTXXSGLXVGAPXR- 261
PP P RG G G S RGS+ R G G P S +P
Sbjct: 1494 G-GPPMRGGPPMFRGGPPGPGRGMPSPMMRGSSMRGGFPQRGGGPGMGPSQYYHDSPQNR 1552
Query: 260 -PRSXGXPAPXXG 225
P G P P G
Sbjct: 1553 GPPMGGLPPPHGG 1565
Score = 28.7 bits (61), Expect = 6.5
Identities = 24/84 (28%), Positives = 25/84 (29%), Gaps = 7/84 (8%)
Frame = +3
Query: 621 PQRGRNPXXXPLPXXX--PXGPGPXXXX---PXXSXXXXXGXPXPXXGXXXX--PXRFPG 779
PQRG P P P GP P G P P G P G
Sbjct: 1531 PQRGGGPGMGPSQYYHDSPQNRGPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMG 1590
Query: 780 GXXPXGPFPXSXAXPPXGXXPXPA 851
G P P PP G P P+
Sbjct: 1591 GPPPRLGMPPPGPPPPNGGPPPPS 1614
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 33.9 bits (74), Expect = 0.17
Identities = 24/87 (27%), Positives = 26/87 (29%)
Frame = -3
Query: 494 GGGXAPKXQXPPPRAVADXLXRXPXPPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTGX 315
G P P R D P P PP P G G P + TP G
Sbjct: 162 GAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTP--GA 219
Query: 314 XGXPHTXXSGLXVGAPXRPRSXGXPAP 234
G P G P P + G P P
Sbjct: 220 PGEPGDSGPPGPPGPPGAPGNDGPPGP 246
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.17
Identities = 28/100 (28%), Positives = 29/100 (29%), Gaps = 2/100 (2%)
Frame = +3
Query: 621 PQRGRNPXXXPLPXXXPXGPGPXXXXPXXSXXXXXGXPXPXXGXXXXPX--RFPGGXXPX 794
P G P P P GP P G P P R+PGG P
Sbjct: 291 PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
Query: 795 GPFPXSXAXPPXGXXPXPAXXXFXXXRGGXXXXXPPPXPS 914
P A P G P P G PPP PS
Sbjct: 351 PPPRYPSAGP--GMYPPPPPSRPPAPPSGHGMIPPPPPPS 388
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = -3
Query: 608 PPXRGGNPGXXGXRDSPPXXXXXXXXXGXAXXXRXRXXGGGXAPKXQXPPPRAVADXLXR 429
PP R G PG G PP R G G P PP R A
Sbjct: 321 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYP--PPPPSRPPAPPSGH 378
Query: 428 XPXPPXPP 405
PP PP
Sbjct: 379 GMIPPPPP 386
Score = 30.3 bits (65), Expect = 2.1
Identities = 29/117 (24%), Positives = 31/117 (26%), Gaps = 13/117 (11%)
Frame = +3
Query: 639 PXXXPLPXXXPXGPG-PXXXXPXXSXXXXXGXPXPXXGXXXXPXRFPGGXXPXGPF---- 803
P P+P P PG P S P P G P PG P P
Sbjct: 268 PSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP 327
Query: 804 PXSXAXPPX--------GXXPXPAXXXFXXXRGGXXXXXPPPXPSXXXRGXGXXXXP 950
P PP G P P + G PP P G G P
Sbjct: 328 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 384
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 33.9 bits (74), Expect = 0.17
Identities = 24/87 (27%), Positives = 26/87 (29%)
Frame = -3
Query: 494 GGGXAPKXQXPPPRAVADXLXRXPXPPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTGX 315
G P P R D P P PP P G G P + TP G
Sbjct: 157 GAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTP--GA 214
Query: 314 XGXPHTXXSGLXVGAPXRPRSXGXPAP 234
G P G P P + G P P
Sbjct: 215 PGEPGDSGPPGPPGPPGAPGNDGPPGP 241
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.17
Identities = 28/100 (28%), Positives = 29/100 (29%), Gaps = 2/100 (2%)
Frame = +3
Query: 621 PQRGRNPXXXPLPXXXPXGPGPXXXXPXXSXXXXXGXPXPXXGXXXXPX--RFPGGXXPX 794
P G P P P GP P G P P R+PGG P
Sbjct: 301 PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
Query: 795 GPFPXSXAXPPXGXXPXPAXXXFXXXRGGXXXXXPPPXPS 914
P A P G P P G PPP PS
Sbjct: 361 PPPRYPSAGP--GMYPPPPPSRPPAPPSGHGMIPPPPPPS 398
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = -3
Query: 608 PPXRGGNPGXXGXRDSPPXXXXXXXXXGXAXXXRXRXXGGGXAPKXQXPPPRAVADXLXR 429
PP R G PG G PP R G G P PP R A
Sbjct: 331 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYP--PPPPSRPPAPPSGH 388
Query: 428 XPXPPXPP 405
PP PP
Sbjct: 389 GMIPPPPP 396
Score = 30.3 bits (65), Expect = 2.1
Identities = 29/117 (24%), Positives = 31/117 (26%), Gaps = 13/117 (11%)
Frame = +3
Query: 639 PXXXPLPXXXPXGPG-PXXXXPXXSXXXXXGXPXPXXGXXXXPXRFPGGXXPXGPF---- 803
P P+P P PG P S P P G P PG P P
Sbjct: 278 PSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP 337
Query: 804 PXSXAXPPX--------GXXPXPAXXXFXXXRGGXXXXXPPPXPSXXXRGXGXXXXP 950
P PP G P P + G PP P G G P
Sbjct: 338 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 394
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 33.9 bits (74), Expect = 0.17
Identities = 24/87 (27%), Positives = 26/87 (29%)
Frame = -3
Query: 494 GGGXAPKXQXPPPRAVADXLXRXPXPPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTGX 315
G P P R D P P PP P G G P + TP G
Sbjct: 157 GAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTP--GA 214
Query: 314 XGXPHTXXSGLXVGAPXRPRSXGXPAP 234
G P G P P + G P P
Sbjct: 215 PGEPGDSGPPGPPGPPGAPGNDGPPGP 241
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.23
Identities = 23/79 (29%), Positives = 23/79 (29%)
Frame = +1
Query: 583 PGFPPRXGGXAXXXKGAETPKXXRCRXXXPXGPAPXXXPPPXRXPXXXGAPXPXGGXXXX 762
PG PP G A G P P GP P P P GAP GG
Sbjct: 151 PGGPPGPAGPAGPP-GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
Query: 763 XXVSXXGXXPXAXFXXPGP 819
G PGP
Sbjct: 210 GASEQGGPGEPGPAGPPGP 228
Score = 32.3 bits (70), Expect = 0.53
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = +1
Query: 556 GGESRXPXXPGFPPRXGGXAXXXKGAETPKXXRCRXXXPXGPAPXXXPPPXRXPXXXGAP 735
GG P PG P G KGA P + P P P P P G P
Sbjct: 110 GGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQ--PPCQPCPGGPPGPAGPAGPPGPP 167
Query: 736 XPXG 747
P G
Sbjct: 168 GPDG 171
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 33.5 bits (73), Expect = 0.23
Identities = 23/79 (29%), Positives = 23/79 (29%)
Frame = +1
Query: 583 PGFPPRXGGXAXXXKGAETPKXXRCRXXXPXGPAPXXXPPPXRXPXXXGAPXPXGGXXXX 762
PG PP G A G P P GP P P P GAP GG
Sbjct: 151 PGGPPGPAGPAGPP-GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
Query: 763 XXVSXXGXXPXAXFXXPGP 819
G PGP
Sbjct: 210 GASEQGGPGEPGPAGPPGP 228
Score = 32.3 bits (70), Expect = 0.53
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = +1
Query: 556 GGESRXPXXPGFPPRXGGXAXXXKGAETPKXXRCRXXXPXGPAPXXXPPPXRXPXXXGAP 735
GG P PG P G KGA P + P P P P P G P
Sbjct: 110 GGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQ--PPCQPCPGGPPGPAGPAGPPGPP 167
Query: 736 XPXG 747
P G
Sbjct: 168 GPDG 171
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 33.5 bits (73), Expect = 0.23
Identities = 23/79 (29%), Positives = 23/79 (29%)
Frame = +1
Query: 583 PGFPPRXGGXAXXXKGAETPKXXRCRXXXPXGPAPXXXPPPXRXPXXXGAPXPXGGXXXX 762
PG PP G A G P P GP P P P GAP GG
Sbjct: 151 PGGPPGPAGPAGPP-GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
Query: 763 XXVSXXGXXPXAXFXXPGP 819
G PGP
Sbjct: 210 GASEQGGPGEPGPAGPPGP 228
Score = 32.3 bits (70), Expect = 0.53
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = +1
Query: 556 GGESRXPXXPGFPPRXGGXAXXXKGAETPKXXRCRXXXPXGPAPXXXPPPXRXPXXXGAP 735
GG P PG P G KGA P + P P P P P G P
Sbjct: 110 GGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQ--PPCQPCPGGPPGPAGPAGPPGPP 167
Query: 736 XPXG 747
P G
Sbjct: 168 GPDG 171
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.23
Identities = 23/79 (29%), Positives = 23/79 (29%)
Frame = +1
Query: 583 PGFPPRXGGXAXXXKGAETPKXXRCRXXXPXGPAPXXXPPPXRXPXXXGAPXPXGGXXXX 762
PG PP G A G P P GP P P P GAP GG
Sbjct: 151 PGGPPGPAGPAGPP-GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
Query: 763 XXVSXXGXXPXAXFXXPGP 819
G PGP
Sbjct: 210 GASEQGGPGEPGPAGPPGP 228
Score = 32.3 bits (70), Expect = 0.53
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = +1
Query: 556 GGESRXPXXPGFPPRXGGXAXXXKGAETPKXXRCRXXXPXGPAPXXXPPPXRXPXXXGAP 735
GG P PG P G KGA P + P P P P P G P
Sbjct: 110 GGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQ--PPCQPCPGGPPGPAGPAGPPGPP 167
Query: 736 XPXG 747
P G
Sbjct: 168 GPDG 171
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.1 bits (72), Expect = 0.30
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 400 GSGGXGGXGXRXNXSATARGGGXCXLGAXPPP 495
G GG GG G GGG C G PPP
Sbjct: 25 GGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPP 56
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 400 GSGGXGGXGXRXNXSATARGGGXCXLGAXPPP 495
G G GG G GGG C G PPP
Sbjct: 82 GGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPP 113
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 33.1 bits (72), Expect = 0.30
Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
Frame = -3
Query: 425 PXPPXPPDPXXXRGTXXGXGNP-----XXSXXNRGSTPRTGXXGXPHTXXSGLXVGAPXR 261
P PP PP P G+ G+P + N+G + + G G P AP
Sbjct: 153 PGPPGPPGPSGDAGSNGNPGSPGQDGQPGAPGNKGPSGQNGNPGAPGAPGQP-GQDAPSE 211
Query: 260 PRSXGXPAP 234
P + G P P
Sbjct: 212 PITPGAPGP 220
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/93 (26%), Positives = 29/93 (31%), Gaps = 6/93 (6%)
Frame = -3
Query: 494 GGGXAPKXQXPPPRAVADXLXRXPX------PPXPPDPXXXRGTXXGXGNPXXSXXNRGS 333
G P PP+ D + P PP PP P G GNP + G
Sbjct: 121 GAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGSNGNP----GSPGQ 176
Query: 332 TPRTGXXGXPHTXXSGLXVGAPXRPRSXGXPAP 234
+ G G GAP P G AP
Sbjct: 177 DGQPGAPGNKGPSGQNGNPGAPGAPGQPGQDAP 209
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 32.7 bits (71), Expect = 0.40
Identities = 26/91 (28%), Positives = 30/91 (32%), Gaps = 6/91 (6%)
Frame = -3
Query: 494 GGGXAPKXQXPPPRAVADXLXRXPX------PPXPPDPXXXRGTXXGXGNPXXSXXNRGS 333
G P PP+ D + P PP PP P G G GNP GS
Sbjct: 88 GAPGLPGNPGHPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNP-------GS 140
Query: 332 TPRTGXXGXPHTXXSGLXVGAPXRPRSXGXP 240
+ G G P G P P + G P
Sbjct: 141 PGQDGQPGAPGNKGPSGPNGNPGAPGAPGQP 171
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 32.7 bits (71), Expect = 0.40
Identities = 26/91 (28%), Positives = 30/91 (32%), Gaps = 6/91 (6%)
Frame = -3
Query: 494 GGGXAPKXQXPPPRAVADXLXRXPX------PPXPPDPXXXRGTXXGXGNPXXSXXNRGS 333
G P PP+ D + P PP PP P G G GNP GS
Sbjct: 121 GAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNP-------GS 173
Query: 332 TPRTGXXGXPHTXXSGLXVGAPXRPRSXGXP 240
+ G G P G P P + G P
Sbjct: 174 PGQDGQPGAPGNKGPSGPNGNPGAPGAPGQP 204
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.40
Identities = 25/87 (28%), Positives = 26/87 (29%)
Frame = +3
Query: 651 PLPXXXPXGPGPXXXXPXXSXXXXXGXPXPXXGXXXXPXRFPGGXXPXGPFPXSXAXPPX 830
P P P GP P G P P PGG P P PP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP--------PGGLPPISGGPPPPPPPPG 766
Query: 831 GXXPXPAXXXFXXXRGGXXXXXPPPXP 911
G P P +GG PPP P
Sbjct: 767 GCPPPPPPPPPGGFKGG---PPPPPPP 790
Score = 31.9 bits (69), Expect = 0.70
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +1
Query: 556 GGESRXPXXPGFPPRXGGXAXXXKGAETPKXXRCRXXXPXGPAPXXXPPPXRXPXXXGAP 735
GG S P G PP G G P GP P PPP P G P
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP--PPPPGGLPPISGGP 758
Query: 736 XP 741
P
Sbjct: 759 PP 760
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.40
Identities = 25/87 (28%), Positives = 26/87 (29%)
Frame = +3
Query: 651 PLPXXXPXGPGPXXXXPXXSXXXXXGXPXPXXGXXXXPXRFPGGXXPXGPFPXSXAXPPX 830
P P P GP P G P P PGG P P PP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP--------PGGLPPISGGPPPPPPPPG 766
Query: 831 GXXPXPAXXXFXXXRGGXXXXXPPPXP 911
G P P +GG PPP P
Sbjct: 767 GCPPPPPPPPPGGFKGG---PPPPPPP 790
Score = 31.9 bits (69), Expect = 0.70
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +1
Query: 556 GGESRXPXXPGFPPRXGGXAXXXKGAETPKXXRCRXXXPXGPAPXXXPPPXRXPXXXGAP 735
GG S P G PP G G P GP P PPP P G P
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP--PPPPGGLPPISGGP 758
Query: 736 XP 741
P
Sbjct: 759 PP 760
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.40
Identities = 25/87 (28%), Positives = 26/87 (29%)
Frame = +3
Query: 651 PLPXXXPXGPGPXXXXPXXSXXXXXGXPXPXXGXXXXPXRFPGGXXPXGPFPXSXAXPPX 830
P P P GP P G P P PGG P P PP
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP--------PGGLPPISGGPPPPPPPPG 349
Query: 831 GXXPXPAXXXFXXXRGGXXXXXPPPXP 911
G P P +GG PPP P
Sbjct: 350 GCPPPPPPPPPGGFKGG---PPPPPPP 373
Score = 31.9 bits (69), Expect = 0.70
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +1
Query: 556 GGESRXPXXPGFPPRXGGXAXXXKGAETPKXXRCRXXXPXGPAPXXXPPPXRXPXXXGAP 735
GG S P G PP G G P GP P PPP P G P
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP--PPPPGGLPPISGGP 341
Query: 736 XP 741
P
Sbjct: 342 PP 343
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 32.7 bits (71), Expect = 0.40
Identities = 27/97 (27%), Positives = 27/97 (27%), Gaps = 3/97 (3%)
Frame = -3
Query: 641 GVSAPLXXXAXPPXRG--GNPGXXGXRDSPPXXXXXXXXXGXAXXXRXRXXGGGXA-PKX 471
GV P PP G G PG G P G G A P
Sbjct: 199 GVPGPDGDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPPG 258
Query: 470 QXPPPRAVADXLXRXPXPPXPPDPXXXRGTXXGXGNP 360
PP P PP PP P G G G P
Sbjct: 259 PPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQP 295
Score = 31.9 bits (69), Expect = 0.70
Identities = 19/60 (31%), Positives = 22/60 (36%)
Frame = -3
Query: 419 PPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTGXXGXPHTXXSGLXVGAPXRPRSXGXP 240
PP PP P G G P + GS P G G P + GAP + G P
Sbjct: 182 PPGPPGPDGNAGPAGAPGVPGPDG-DAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAP 240
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 32.3 bits (70), Expect = 0.53
Identities = 34/131 (25%), Positives = 36/131 (27%), Gaps = 4/131 (3%)
Frame = -3
Query: 740 GXGAPXXXGXRXGGGXXXGAGPXGXXXRQRXXXGVSAPLXXXAXPPXRG--GNPGXXGXR 567
G G G GGG G G G G + P P G GNPG G
Sbjct: 97 GAGGGGGGGYATGGGGGGGGG--GCCSCGIGAAGPAGPPGADGNPGTDGAAGNPGQAGAD 154
Query: 566 DSP--PXXXXXXXXXGXAXXXRXRXXGGGXAPKXQXPPPRAVADXLXRXPXPPXPPDPXX 393
S P G AP P + P PP PP
Sbjct: 155 ASQDAPSASDFCFDCPPGPAGPAGNAGPPGAPGGPGAPGNTPSGGAAGPPGPPGPPGGPG 214
Query: 392 XRGTXXGXGNP 360
G G GNP
Sbjct: 215 NDGQPGGPGNP 225
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 32.3 bits (70), Expect = 0.53
Identities = 21/71 (29%), Positives = 25/71 (35%)
Frame = -3
Query: 425 PXPPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTGXXGXPHTXXSGLXVGAPXRPRSXG 246
P P PP P G GN +RG G G P T + GAP P + G
Sbjct: 170 PGGPGPPGPPGPEGAPGEDGNTP----SRGGVGEAGPPGPPGTSGNPGTDGAPGNPGAPG 225
Query: 245 XPAPXXGSXFP 213
G+ P
Sbjct: 226 QVTETPGTPGP 236
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 31.9 bits (69), Expect = 0.70
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +1
Query: 556 GGESRXPXXPGFPPRXGGXAXXXKGAETPKXXRCRXXXPXGPAPXXXPPPXRXPXXXGAP 735
GG P PG P G KGA P + P P P P P G
Sbjct: 115 GGSPGKPGKPGKPGAPGAPGAAGKGASAP--CEAKTPPPCQPCPAGPPGPPGPDGPAGPA 172
Query: 736 XPXG 747
P G
Sbjct: 173 GPDG 176
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 31.9 bits (69), Expect = 0.70
Identities = 33/122 (27%), Positives = 33/122 (27%), Gaps = 6/122 (4%)
Frame = +1
Query: 400 GSGGXG-GXGXRXNXSATARGGGXCXLGAXP-PPXXRXRXXXAXXXXXXXXXXXGGES-- 567
G GG G G G A GGG C P PP R G S
Sbjct: 89 GGGGYGAGGGGGGGGGEAAGGGGGCTGCCNPGPPGPGGRPGKPGTPGKPGAPGNPGASGK 148
Query: 568 --RXPXXPGFPPRXGGXAXXXKGAETPKXXRCRXXXPXGPAPXXXPPPXRXPXXXGAPXP 741
P P PP G P P GP P P P G P P
Sbjct: 149 GAAAPCEPSTPPPCQPCPAGPPGPPGPDGT---PGEPGGPGPAGSPAGPSGPGPAGPPGP 205
Query: 742 XG 747
G
Sbjct: 206 AG 207
Score = 31.1 bits (67), Expect = 1.2
Identities = 38/157 (24%), Positives = 42/157 (26%)
Frame = -3
Query: 716 GXRXGGGXXXGAGPXGXXXRQRXXXGVSAPLXXXAXPPXRGGNPGXXGXRDSPPXXXXXX 537
G GGG G G + G PP GG PG G P
Sbjct: 85 GGAGGGGGYGAGGGGGGGGGEAAGGGGGCTGCCNPGPPGPGGRPGKPGTPGKP------- 137
Query: 536 XXXGXAXXXRXRXXGGGXAPKXQXPPPRAVADXLXRXPXPPXPPDPXXXRGTXXGXGNPX 357
A G AP PP P P PP P GT G P
Sbjct: 138 ----GAPGNPGASGKGAAAPCEPSTPPPC-------QPCPAGPPGPPGPDGTPGEPGGPG 186
Query: 356 XSXXNRGSTPRTGXXGXPHTXXSGLXVGAPXRPRSXG 246
+ G + G G P G P +P G
Sbjct: 187 PAGSPAGPS-GPGPAGPPGPAGPPGNDGQPGQPGGPG 222
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -1
Query: 841 GXXPXGGXAXXXGXGPXGXXPPGKRXGXXXXPXXGXGXPXXXXXEXXGXXXXGPGPXG 668
G P G A G GP G P G P G P G GPGP G
Sbjct: 184 GPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQ-PGGPGQDGASSAG-GEAGPGPAG 239
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 31.5 bits (68), Expect = 0.92
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = -3
Query: 419 PPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTGXXGXPHTXXSGLXVGAPXRPRSXGXP 240
PP PP P G GNP + + GS G G P GAP G P
Sbjct: 105 PPGPPGPDGSAGPAGPAGNP-GADGDAGSPGEAGGAGPPGPPGPDGNPGAPGNDGEAGSP 163
Score = 28.7 bits (61), Expect = 6.5
Identities = 28/110 (25%), Positives = 32/110 (29%), Gaps = 6/110 (5%)
Frame = -3
Query: 614 AXPPXRGGNPGXXGXRDSPPXXXXXXXXXGXAXXXRXRXXGGGXAPKXQXPPPRAVADXL 435
A P GNPG G SP G + P R+++
Sbjct: 115 AGPAGPAGNPGADGDAGSPGEAGGAGPPGPPGPDGNPGAPGNDG--EAGSPGTRSISSPG 172
Query: 434 XRXP-XPPXPPDPXXXRGTXXGXG-----NPXXSXXNRGSTPRTGXXGXP 303
P PP PP P G G G P N GS G G P
Sbjct: 173 PAGPAGPPGPPGPDGAPGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGGP 222
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 31.5 bits (68), Expect = 0.92
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = -3
Query: 419 PPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTGXXGXPHTXXSGLXVGAPXRPRSXGXP 240
PP PP P G GNP + + GS G G P GAP G P
Sbjct: 105 PPGPPGPDGSAGPAGPAGNP-GADGDAGSPGEAGGAGPPGPPGPDGNPGAPGNDGEAGSP 163
Score = 28.7 bits (61), Expect = 6.5
Identities = 28/110 (25%), Positives = 32/110 (29%), Gaps = 6/110 (5%)
Frame = -3
Query: 614 AXPPXRGGNPGXXGXRDSPPXXXXXXXXXGXAXXXRXRXXGGGXAPKXQXPPPRAVADXL 435
A P GNPG G SP G + P R+++
Sbjct: 115 AGPAGPAGNPGADGDAGSPGEAGGAGPPGPPGPDGNPGAPGNDG--EAGSPGTRSISSPG 172
Query: 434 XRXP-XPPXPPDPXXXRGTXXGXG-----NPXXSXXNRGSTPRTGXXGXP 303
P PP PP P G G G P N GS G G P
Sbjct: 173 PAGPAGPPGPPGPDGAPGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGGP 222
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 31.5 bits (68), Expect = 0.92
Identities = 25/90 (27%), Positives = 26/90 (28%), Gaps = 4/90 (4%)
Frame = -3
Query: 491 GGXAPKXQXPPPRAVADX----LXRXPXPPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPR 324
GG PK PP + PP P P G G GNP R
Sbjct: 153 GGPGPKGPPGPPGGHGEPGPAGRGGPRGPPGPGGPQGEAGEDGGAGNPGTPGQVRSLPSP 212
Query: 323 TGXXGXPHTXXSGLXVGAPXRPRSXGXPAP 234
G G P GA RP G P
Sbjct: 213 PGEPGQPGEPGGPGEPGADGRPGHPGRAGP 242
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/66 (27%), Positives = 19/66 (28%), Gaps = 2/66 (3%)
Frame = -3
Query: 749 PPXGXGAPXXXGXRXGGGXXXGAGPXGXXXRQ--RXXXGVSAPLXXXAXPPXRGGNPGXX 576
PP G G P G G GP G G + PP G PG
Sbjct: 163 PPGGHGEPGPAGRGGPRGPPGPGGPQGEAGEDGGAGNPGTPGQVRSLPSPPGEPGQPGEP 222
Query: 575 GXRDSP 558
G P
Sbjct: 223 GGPGEP 228
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -2
Query: 528 GXRXGXXXPXXGRXXGPQXAXPPPPXRGG 442
G G P GR GP + PPPP RGG
Sbjct: 750 GFNAGAPPPPFGRGAGPMSSFPPPP-RGG 777
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/67 (28%), Positives = 22/67 (32%)
Frame = -3
Query: 425 PXPPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTGXXGXPHTXXSGLXVGAPXRPRSXG 246
P P P P RG GNP + N G + G G P G P +
Sbjct: 212 PGQPGRPGPQGPRGETGPAGNP-GAPGNDGEAGKNGNAGRPGPPGHPGKNGVPGQKGEDA 270
Query: 245 XPAPXXG 225
P P G
Sbjct: 271 APGPDAG 277
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/67 (28%), Positives = 22/67 (32%)
Frame = -3
Query: 425 PXPPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTGXXGXPHTXXSGLXVGAPXRPRSXG 246
P P P P RG GNP + N G + G G P G P +
Sbjct: 206 PGQPGRPGPQGPRGETGPAGNP-GAPGNDGEAGKNGNAGRPGPPGHPGKNGVPGQKGEDA 264
Query: 245 XPAPXXG 225
P P G
Sbjct: 265 APGPDAG 271
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/87 (25%), Positives = 24/87 (27%), Gaps = 3/87 (3%)
Frame = -1
Query: 700 GXXXXGPGPXGXXXGNGXFXGFRPLXGXWXXPPXGGETPXXXXXXXXXXXXXXXXXXXXX 521
G G G G G G F P G PP G +
Sbjct: 485 GGGGFGGGGGGFGGGGGGFGSGSPFGGAAPSPPSGPDPDFGGDTAAAGPTEEEFFTGESA 544
Query: 520 XXXXGPAXGEXXGP---PXGXPPPPXP 449
G+ GP P G PPPP P
Sbjct: 545 LSRSKGPTGDGYGPPVFPGGAPPPPVP 571
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 30.3 bits (65), Expect = 2.1
Identities = 40/170 (23%), Positives = 46/170 (27%)
Frame = +1
Query: 238 AGXPXDRGRXGAPTXRPXWXVWGQPXXPVRGVEPLFXXEXXGFPXPXXVPLXXXGSGGXG 417
AG P G+ GAP + + GQP R + P P P G G
Sbjct: 91 AGPPGPPGQPGAPGEQGHPGLAGQPGSGAR-INPATGRPGFCITCPAGAPGPAGPPGAPG 149
Query: 418 GXGXRXNXSATARGGGXCXLGAXPPPXXRXRXXXAXXXXXXXXXXXGGESRXPXXPGFPP 597
G A A+ GG PP R A G P PG P
Sbjct: 150 PKGNNGQPGAPAQSGGR------GPPGPRGPAGDA------------GSPGQPGHPGSPG 191
Query: 598 RXGGXAXXXKGAETPKXXRCRXXXPXGPAPXXXPPPXRXPXXXGAPXPXG 747
G +G P GP P G P P G
Sbjct: 192 NPGRGGQRSRGLPGPSGRPGPPGPAGGPGQPGHSGGAGSPGPQGPPGPSG 241
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/53 (28%), Positives = 17/53 (32%)
Frame = +1
Query: 592 PPRXGGXAXXXKGAETPKXXRCRXXXPXGPAPXXXPPPXRXPXXXGAPXPXGG 750
PPR G G+ P P +P PPP P P P G
Sbjct: 266 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 318
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/53 (28%), Positives = 17/53 (32%)
Frame = +1
Query: 592 PPRXGGXAXXXKGAETPKXXRCRXXXPXGPAPXXXPPPXRXPXXXGAPXPXGG 750
PPR G G+ P P +P PPP P P P G
Sbjct: 287 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 339
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/53 (28%), Positives = 17/53 (32%)
Frame = +1
Query: 592 PPRXGGXAXXXKGAETPKXXRCRXXXPXGPAPXXXPPPXRXPXXXGAPXPXGG 750
PPR G G+ P P +P PPP P P P G
Sbjct: 272 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 324
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Frame = -3
Query: 419 PPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTGXXGXPHTXXSGL-----XVGAPXRPR 255
PP PP P G+ G P N GS ++G G SG GAP +P
Sbjct: 170 PPGPPGPAGSAGSPGQAGAP----GNPGSPGKSGQRGRGLPGPSGAPGSQGPPGAPGQPG 225
Query: 254 SXGXPAP 234
S P P
Sbjct: 226 SGNAPGP 232
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Frame = -3
Query: 419 PPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTGXXGXPHTXXSGL-----XVGAPXRPR 255
PP PP P G+ G P N GS ++G G SG GAP +P
Sbjct: 170 PPGPPGPAGSAGSPGQAGAP----GNPGSPGKSGQRGRGLPGPSGAPGPQGPPGAPGQPG 225
Query: 254 SXGXPAP 234
S P P
Sbjct: 226 SGNAPGP 232
>Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical
protein F54B11.1 protein.
Length = 339
Score = 29.9 bits (64), Expect = 2.8
Identities = 38/142 (26%), Positives = 41/142 (28%)
Frame = -3
Query: 734 GAPXXXGXRXGGGXXXGAGPXGXXXRQRXXXGVSAPLXXXAXPPXRGGNPGXXGXRDSPP 555
G P G G G GP G Q + PL PP + GN G G SP
Sbjct: 191 GPPGPPGLNGQPGLPGGMGPPG----QSMSNVLPGPLGPPG-PPGQPGNHGLAGQPGSPG 245
Query: 554 XXXXXXXXXGXAXXXRXRXXGGGXAPKXQXPPPRAVADXLXRXPXPPXPPDPXXXRGTXX 375
A G P PP A PP P P G
Sbjct: 246 QSVLGGIVGFAAP--------GPMGPPGLMGPPGLDAQNGANGFGPPGLPGPPGPPGRPG 297
Query: 374 GXGNPXXSXXNRGSTPRTGXXG 309
GNP + GS R G G
Sbjct: 298 SDGNPGVPGQSGGSR-RHGEKG 318
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = -3
Query: 749 PPXGXGAPXXXGXRXGGGXXXGAGPXGXXXRQRXXXGVSAPLXXXAXPPXRGGNPG 582
PP G GAP G GG G P G P+ A PP G PG
Sbjct: 413 PPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPV--GAPPPGAAGAPG 466
Score = 28.3 bits (60), Expect = 8.6
Identities = 25/103 (24%), Positives = 29/103 (28%), Gaps = 8/103 (7%)
Frame = +3
Query: 621 PQRGRNPXXXPLPXXXPX---GPGPXXXXPXXSXXXXXGXPXPXXGXXXXPXRFPGGXXP 791
PQ+ + P P P G P G P P P F G P
Sbjct: 311 PQQQQQQFGAPPPQGAPQQGFGAPPQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPP 370
Query: 792 XGPFPXSXAX-----PPXGXXPXPAXXXFXXXRGGXXXXXPPP 905
P + A PP P P+ GG PPP
Sbjct: 371 VSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPP 413
>AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen protein
49 protein.
Length = 283
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/52 (30%), Positives = 20/52 (38%)
Frame = -3
Query: 464 PPPRAVADXLXRXPXPPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTGXXG 309
P P+ P PP PP P RG G P + ++G T G G
Sbjct: 133 PNPKECIKCPAGPPGPPGPPGPLGPRG-DKGPSGPRGALGDQGETGPVGEIG 183
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = -3
Query: 494 GGGXAPKXQXPPPRAVADXLXRXPXPPXPPDPXXXRGTXXGXGNPXXS--XXNRGSTPRT 321
G AP PP AV + + P P PP G GNP S G+
Sbjct: 121 GAPGAPGFPGRPP-AVCEEITEPPCTPCPPGEPGPPGPPGDAGNPGQSGHPGRNGNDGGV 179
Query: 320 GXXGXP 303
G G P
Sbjct: 180 GPQGPP 185
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 29.1 bits (62), Expect = 4.9
Identities = 23/87 (26%), Positives = 25/87 (28%)
Frame = -3
Query: 494 GGGXAPKXQXPPPRAVADXLXRXPXPPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTGX 315
GGG PPP AD P P P+ G + GS P
Sbjct: 31 GGGGGGGDAAPPPPPPADAAP-APAPAPEPEAAPAAPAADAGGYAAAASAGGGSYPAKKR 89
Query: 314 XGXPHTXXSGLXVGAPXRPRSXGXPAP 234
G AP P S PAP
Sbjct: 90 RVARDYAEGGAAPAAPAEPASAPAPAP 116
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +1
Query: 559 GESRXPXXPGFPPRXGGXAXXXKGAETPKXXRCRXXXPXGPAPXXXPPPXRXPXXXGAPX 738
G P PG P G KGA P + P P P P P G
Sbjct: 115 GNPGKPGKPGKPGAPGNPGAPGKGAAVP--CEAKTPPPCKPCPAGPPGPPGPDGPAGPAG 172
Query: 739 PXG 747
P G
Sbjct: 173 PDG 175
>U41624-5|AAF99941.1| 314|Caenorhabditis elegans Collagen protein
174 protein.
Length = 314
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/75 (28%), Positives = 26/75 (34%), Gaps = 6/75 (8%)
Frame = -3
Query: 419 PPXPPDPXXXRGTXXGXGNP-----XXSXXNRGSTPRTGXXGXPHTXXSGLXVGAPXRP- 258
PP PP P G GNP N+G G G P + G P P
Sbjct: 171 PPGPPGPAGSAGVKGPSGNPGAPGTDGPAGNKGGQGPPGNAGAPGANGNPGNAGTPGIPG 230
Query: 257 RSXGXPAPXXGSXFP 213
++ PAP + P
Sbjct: 231 KTIEVPAPAGPAGAP 245
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 4.9
Identities = 23/82 (28%), Positives = 23/82 (28%)
Frame = +3
Query: 657 PXXXPXGPGPXXXXPXXSXXXXXGXPXPXXGXXXXPXRFPGGXXPXGPFPXSXAXPPXGX 836
P P GP G P P P P P GPF S A PP G
Sbjct: 172 PSGAPPSGGPPGPFGPSGAPPSGGPPGPFN-----PSEAPPSGGPTGPFDPSGA-PPSGG 225
Query: 837 XPXPAXXXFXXXRGGXXXXXPP 902
P P GG P
Sbjct: 226 PPGPFNPSGAPPSGGPPGPFDP 247
Score = 29.1 bits (62), Expect = 4.9
Identities = 26/94 (27%), Positives = 26/94 (27%), Gaps = 5/94 (5%)
Frame = +3
Query: 636 NPXXXPLPXXXPXGP-----GPXXXXPXXSXXXXXGXPXPXXGXXXXPXRFPGGXXPXGP 800
NP P P P GP P P P P P P GP
Sbjct: 426 NPSGAP-PSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGP 484
Query: 801 FPXSXAXPPXGXXPXPAXXXFXXXRGGXXXXXPP 902
F S A PP G P P GG P
Sbjct: 485 FDPSGA-PPSGGPPGPFNPSGAPPSGGPPGPFDP 517
Score = 28.7 bits (61), Expect = 6.5
Identities = 23/82 (28%), Positives = 23/82 (28%)
Frame = +3
Query: 657 PXXXPXGPGPXXXXPXXSXXXXXGXPXPXXGXXXXPXRFPGGXXPXGPFPXSXAXPPXGX 836
P P GP G P P P P P GPF S A PP G
Sbjct: 202 PSEAPPSGGPTGPFDPSGAPPSGGPPGPFN-----PSGAPPSGGPPGPFDPSGA-PPSGG 255
Query: 837 XPXPAXXXFXXXRGGXXXXXPP 902
P P GG P
Sbjct: 256 PPGPFNPSGAPPSGGPPGPFDP 277
Score = 28.7 bits (61), Expect = 6.5
Identities = 23/82 (28%), Positives = 23/82 (28%)
Frame = +3
Query: 657 PXXXPXGPGPXXXXPXXSXXXXXGXPXPXXGXXXXPXRFPGGXXPXGPFPXSXAXPPXGX 836
P P GP G P P P P P GPF S A PP G
Sbjct: 232 PSGAPPSGGPPGPFDPSGAPPSGGPPGPFN-----PSGAPPSGGPPGPFDPSGA-PPSGG 285
Query: 837 XPXPAXXXFXXXRGGXXXXXPP 902
P P GG P
Sbjct: 286 PPGPFDPSGAPPSGGPPGPFDP 307
Score = 28.7 bits (61), Expect = 6.5
Identities = 23/82 (28%), Positives = 23/82 (28%)
Frame = +3
Query: 657 PXXXPXGPGPXXXXPXXSXXXXXGXPXPXXGXXXXPXRFPGGXXPXGPFPXSXAXPPXGX 836
P P GP G P P P P P GPF S A PP G
Sbjct: 292 PSGAPPSGGPPGPFDPSGAQPSGGPPGPFN-----PSGAPPSGGPPGPFDPSGA-PPSGG 345
Query: 837 XPXPAXXXFXXXRGGXXXXXPP 902
P P GG P
Sbjct: 346 PPGPFNPSGAPPSGGPPGPFDP 367
Score = 28.7 bits (61), Expect = 6.5
Identities = 23/82 (28%), Positives = 23/82 (28%)
Frame = +3
Query: 657 PXXXPXGPGPXXXXPXXSXXXXXGXPXPXXGXXXXPXRFPGGXXPXGPFPXSXAXPPXGX 836
P P GP G P P P P P GPF S A PP G
Sbjct: 322 PSGAPPSGGPPGPFDPSGAPPSGGPPGPFN-----PSGAPPSGGPPGPFDPSGA-PPSGG 375
Query: 837 XPXPAXXXFXXXRGGXXXXXPP 902
P P GG P
Sbjct: 376 PPGPFDPSGAPPSGGPPGPFDP 397
Score = 28.7 bits (61), Expect = 6.5
Identities = 23/76 (30%), Positives = 23/76 (30%), Gaps = 5/76 (6%)
Frame = +3
Query: 636 NPXXXPLPXXXPXGP-----GPXXXXPXXSXXXXXGXPXPXXGXXXXPXRFPGGXXPXGP 800
NP P P P GP P P P P P P GP
Sbjct: 456 NPSGAP-PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP 514
Query: 801 FPXSXAXPPXGXXPXP 848
F S A PP G P P
Sbjct: 515 FDPSGA-PPSGMPPVP 529
Score = 28.3 bits (60), Expect = 8.6
Identities = 38/172 (22%), Positives = 41/172 (23%), Gaps = 4/172 (2%)
Frame = -3
Query: 716 GXRXGGGXXXGAGPXGXXXRQRXXXGVSAP-LXXXAXPPXRGGNPGXXGXRDSPPXXXXX 540
G G GP G P L + P GG PG G +PP
Sbjct: 138 GKHHSTGAPPSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPP 197
Query: 539 XXXXGXAXXXRXRXXG---GGXAPKXQXPPPRAVADXLXRXPXPPXPPDPXXXRGTXXGX 369
G AP PP PP P DP G
Sbjct: 198 GPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP---SGAPPSG 254
Query: 368 GNPXXSXXNRGSTPRTGXXGXPHTXXSGLXVGAPXRPRSXGXPAPXXGSXFP 213
G P N P +G P G P P P G P
Sbjct: 255 GPP--GPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGP 304
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +3
Query: 657 PXXXPXGPGPXXXXPXXSXXXXXGXPXPXXGXXXXPXRFPGGXXPXGPFPXSXAXPPXGX 836
P P GP G P P P P P GPF S A PP G
Sbjct: 352 PSGAPPSGGPPGPFDPSGAPPSGGPPGPFD-----PSGAPPSGGPPGPFDPSGA-PPSGG 405
Query: 837 XPXP 848
P P
Sbjct: 406 PPGP 409
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 406 GGXGGXGXRXNXSATARGGGXCXLGAXPPP 495
GG GG G + ++ GGG A PPP
Sbjct: 275 GGGGGGGSSGGYAGSSGGGGYSAPAAAPPP 304
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 406 GGXGGXGXRXNXSATARGGGXCXLGAXPPP 495
GG GG G + ++ GGG A PPP
Sbjct: 275 GGGGGGGSSGGYAGSSGGGGYSAPAAAPPP 304
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 6.5
Identities = 27/95 (28%), Positives = 27/95 (28%), Gaps = 5/95 (5%)
Frame = +3
Query: 657 PXXXPXGPGPXXXXPXXSXXXXXGX--PXPXXGXXXXPXRFPGGXXPXG---PFPXSXAX 821
P P GP P G P P P F G P P P
Sbjct: 271 PPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMG 330
Query: 822 PPXGXXPXPAXXXFXXXRGGXXXXXPPPXPSXXXR 926
PP G P P F RGG PP P R
Sbjct: 331 PPRGFMPPPHPMMF---RGGPYPPFFPPPPPHFMR 362
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 6.5
Identities = 27/95 (28%), Positives = 27/95 (28%), Gaps = 5/95 (5%)
Frame = +3
Query: 657 PXXXPXGPGPXXXXPXXSXXXXXGX--PXPXXGXXXXPXRFPGGXXPXG---PFPXSXAX 821
P P GP P G P P P F G P P P
Sbjct: 271 PPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMG 330
Query: 822 PPXGXXPXPAXXXFXXXRGGXXXXXPPPXPSXXXR 926
PP G P P F RGG PP P R
Sbjct: 331 PPRGFMPPPHPMMF---RGGPYPPFFPPPPPHFMR 362
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/85 (24%), Positives = 26/85 (30%)
Frame = -3
Query: 494 GGGXAPKXQXPPPRAVADXLXRXPXPPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTGX 315
G P PP+A D + P P P P +G G+ G + G
Sbjct: 119 GVAGLPGNPGRPPQAPCDPITPPPCKPCPQGPPGVQGPPGPAGDAGLD-GQPGGPGQDGQ 177
Query: 314 XGXPHTXXSGLXVGAPXRPRSXGXP 240
G P G P P G P
Sbjct: 178 PGQPGPKGPPGVNGQPGAPGQDGNP 202
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 28.3 bits (60), Expect = 8.6
Identities = 22/67 (32%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
Frame = -3
Query: 749 PPXGXGAPXXXGXRXGGGXXXGAGPXGXXXR--QRXXXGVSAPLXXXAXPPXRGGNPGXX 576
PP G P G + G G G G R R G P A P GG PG
Sbjct: 143 PPGAVGGP---GPKGPPGPPGGPGELGGPGRGGNRGPPGPRGP-PGEAGPDGEGGRPGQA 198
Query: 575 GXRDSPP 555
G S P
Sbjct: 199 GQTRSAP 205
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 28.3 bits (60), Expect = 8.6
Identities = 22/67 (32%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
Frame = -3
Query: 749 PPXGXGAPXXXGXRXGGGXXXGAGPXGXXXR--QRXXXGVSAPLXXXAXPPXRGGNPGXX 576
PP G P G + G G G G R R G P A P GG PG
Sbjct: 143 PPGAVGGP---GPKGPPGPPGGPGELGGPGRGGNRGPPGPRGP-PGEAGPDGEGGRPGQA 198
Query: 575 GXRDSPP 555
G S P
Sbjct: 199 GQTRSAP 205
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.3 bits (60), Expect = 8.6
Identities = 22/87 (25%), Positives = 25/87 (28%)
Frame = -3
Query: 494 GGGXAPKXQXPPPRAVADXLXRXPXPPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTGX 315
G P P R D P P PP P G G+ + TP G
Sbjct: 164 GAPGDPGEAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTP--GA 221
Query: 314 XGXPHTXXSGLXVGAPXRPRSXGXPAP 234
G G P P + G P P
Sbjct: 222 PGEAGDAGPAGPPGPPGAPGNDGPPGP 248
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 28.3 bits (60), Expect = 8.6
Identities = 31/125 (24%), Positives = 37/125 (29%), Gaps = 1/125 (0%)
Frame = -3
Query: 605 PXRGGNPGXXGXRDSPPXXXXXXXXXGXAXXXRXRXXGGGXAPKXQXPPP-RAVADXLXR 429
P GNPG +D+ P A G P P R+ L
Sbjct: 146 PGAPGNPGQDA-QDNQPAGPDSFCFDCPAGPPGPSGAPGQKGPSGAPGQPGRSGGASLPG 204
Query: 428 XPXPPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTGXXGXPHTXXSGLXVGAPXRPRSX 249
P P PP P G+ G P G G P +G GAP +P
Sbjct: 205 PPGPAGPPGPSGQPGSNGNAGAPGAPGHVVDVPGTPGPAGPP--GPAG-PAGAPGQPGQA 261
Query: 248 GXPAP 234
G P
Sbjct: 262 GHAQP 266
>AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen protein
104 protein.
Length = 281
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 214 GXXEPXXGAGXPXDRGRXGAPTXRPXWXVWGQPXXPVRGVEP 339
G P G P D+G GAP R G P P G EP
Sbjct: 142 GFPGPAGPPGAPGDKGNDGAPGLRGPDGHPGHPGNPGYGGEP 183
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.3 bits (60), Expect = 8.6
Identities = 22/87 (25%), Positives = 25/87 (28%)
Frame = -3
Query: 494 GGGXAPKXQXPPPRAVADXLXRXPXPPXPPDPXXXRGTXXGXGNPXXSXXNRGSTPRTGX 315
G P P R D P P PP P G G+ + TP G
Sbjct: 164 GAPGDPGEAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTP--GA 221
Query: 314 XGXPHTXXSGLXVGAPXRPRSXGXPAP 234
G G P P + G P P
Sbjct: 222 PGEAGDAGPAGPPGPPGAPGNDGPPGP 248
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,556,806
Number of Sequences: 27780
Number of extensions: 274094
Number of successful extensions: 1893
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1652
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -