Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_I12
         (904 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    23   2.9  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    23   2.9  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              22   6.7  

>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
 Frame = +1

Query: 130 CSLTRSPCHNDSRPQRDVIDNEIN---NK--ETQKSTA 228
           C L   PC N+ R  + ++ + ++   NK  E QK TA
Sbjct: 46  CMLDEGPCTNEGRELKKILPDALSTGCNKCNEKQKHTA 83


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
 Frame = +1

Query: 130 CSLTRSPCHNDSRPQRDVIDNEIN---NK--ETQKSTA 228
           C L   PC N+ R  + ++ + ++   NK  E QK TA
Sbjct: 46  CMLDEGPCTNEGRELKKILPDALSTGCNKCNEKQKHTA 83


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = -3

Query: 569 KN*FITKRNYDAEASLDVDEESPKMLVPKCKT 474
           KN     +   A   L +DE S K LV  C T
Sbjct: 75  KNNVFKPQGIKAVMELLIDENSVKQLVSDCST 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,558
Number of Sequences: 438
Number of extensions: 2398
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)