Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_I08
(894 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 115 4e-26
03_01_0547 + 4093196-4093657,4094267-4095148 115 4e-26
03_01_0544 + 4082528-4082989,4083585-4084466 115 4e-26
03_01_0543 + 4076981-4077442,4078145-4079026 115 4e-26
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 72 5e-13
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 72 5e-13
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 69 4e-12
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 56 3e-08
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 56 4e-08
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 43 3e-04
02_04_0462 + 23131433-23132836 41 0.001
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 40 0.003
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 37 0.019
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 37 0.025
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 35 0.10
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 33 0.23
03_05_0511 + 25056018-25059107 31 1.2
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 31 1.6
01_01_0016 - 88825-90411 29 5.0
09_01_0129 - 1954470-1955129,1956285-1956371,1956475-1956663,195... 29 6.6
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 28 8.7
03_04_0206 - 18493178-18495310 28 8.7
02_04_0148 - 20198407-20201424 28 8.7
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 115 bits (277), Expect = 4e-26
Identities = 54/72 (75%), Positives = 59/72 (81%)
Frame = +2
Query: 203 KCGGXXKRTIEXVRDRRPRKMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVT 382
K GG KR IE ++ +M K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T
Sbjct: 30 KLGGIDKRVIERF-EKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCT 88
Query: 383 IIDAPGHRDFIK 418
+IDAPGHRDFIK
Sbjct: 89 VIDAPGHRDFIK 100
Score = 99.1 bits (236), Expect = 4e-21
Identities = 44/65 (67%), Positives = 54/65 (83%)
Frame = +1
Query: 535 LAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG 714
LAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ G
Sbjct: 139 LAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEG 198
Query: 715 DNMLE 729
DNM+E
Sbjct: 199 DNMIE 203
Score = 71.3 bits (167), Expect = 9e-13
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = +3
Query: 417 RNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALARF 542
+NMITGTSQADCAVLI+ + TG FEAGISK+GQTREHAL F
Sbjct: 100 KNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAF 141
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 115 bits (277), Expect = 4e-26
Identities = 54/72 (75%), Positives = 59/72 (81%)
Frame = +2
Query: 203 KCGGXXKRTIEXVRDRRPRKMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVT 382
K GG KR IE ++ +M K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T
Sbjct: 30 KLGGIDKRVIERF-EKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCT 88
Query: 383 IIDAPGHRDFIK 418
+IDAPGHRDFIK
Sbjct: 89 VIDAPGHRDFIK 100
Score = 99.1 bits (236), Expect = 4e-21
Identities = 44/65 (67%), Positives = 54/65 (83%)
Frame = +1
Query: 535 LAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG 714
LAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ G
Sbjct: 139 LAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEG 198
Query: 715 DNMLE 729
DNM+E
Sbjct: 199 DNMIE 203
Score = 71.3 bits (167), Expect = 9e-13
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = +3
Query: 417 RNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALARF 542
+NMITGTSQADCAVLI+ + TG FEAGISK+GQTREHAL F
Sbjct: 100 KNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAF 141
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 115 bits (277), Expect = 4e-26
Identities = 54/72 (75%), Positives = 59/72 (81%)
Frame = +2
Query: 203 KCGGXXKRTIEXVRDRRPRKMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVT 382
K GG KR IE ++ +M K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T
Sbjct: 30 KLGGIDKRVIERF-EKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCT 88
Query: 383 IIDAPGHRDFIK 418
+IDAPGHRDFIK
Sbjct: 89 VIDAPGHRDFIK 100
Score = 99.1 bits (236), Expect = 4e-21
Identities = 44/65 (67%), Positives = 54/65 (83%)
Frame = +1
Query: 535 LAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG 714
LAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ G
Sbjct: 139 LAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEG 198
Query: 715 DNMLE 729
DNM+E
Sbjct: 199 DNMIE 203
Score = 71.3 bits (167), Expect = 9e-13
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = +3
Query: 417 RNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALARF 542
+NMITGTSQADCAVLI+ + TG FEAGISK+GQTREHAL F
Sbjct: 100 KNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAF 141
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 115 bits (277), Expect = 4e-26
Identities = 54/72 (75%), Positives = 59/72 (81%)
Frame = +2
Query: 203 KCGGXXKRTIEXVRDRRPRKMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVT 382
K GG KR IE ++ +M K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T
Sbjct: 30 KLGGIDKRVIERF-EKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCT 88
Query: 383 IIDAPGHRDFIK 418
+IDAPGHRDFIK
Sbjct: 89 VIDAPGHRDFIK 100
Score = 99.1 bits (236), Expect = 4e-21
Identities = 44/65 (67%), Positives = 54/65 (83%)
Frame = +1
Query: 535 LAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG 714
LAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ G
Sbjct: 139 LAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEG 198
Query: 715 DNMLE 729
DNM+E
Sbjct: 199 DNMIE 203
Score = 71.3 bits (167), Expect = 9e-13
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = +3
Query: 417 RNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALARF 542
+NMITGTSQADCAVLI+ + TG FEAGISK+GQTREHAL F
Sbjct: 100 KNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAF 141
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 72.1 bits (169), Expect = 5e-13
Identities = 27/57 (47%), Positives = 42/57 (73%)
Frame = +2
Query: 245 DRRPRKMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 415
++ ++ GKGSF YAW +D+ ERERG+T+ +A+ ET KY V ++D+PGH+DF+
Sbjct: 283 EKEAKEKGKGSFAYAWAMDESSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFV 339
Score = 51.2 bits (117), Expect = 1e-06
Identities = 23/62 (37%), Positives = 41/62 (66%)
Frame = +1
Query: 544 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 723
+ GV+QLIV VNKMD+ YS+ RFE IK ++ S+++ + ++V ++P+S N+
Sbjct: 387 SFGVEQLIVAVNKMDAIG--YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNL 444
Query: 724 LE 729
++
Sbjct: 445 IK 446
Score = 45.2 bits (102), Expect = 7e-05
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 5/42 (11%)
Frame = +3
Query: 420 NMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTREHA 530
NMI+G +QAD A+L+V A TG FEAG+ GQT+EHA
Sbjct: 341 NMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHA 382
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 72.1 bits (169), Expect = 5e-13
Identities = 27/57 (47%), Positives = 42/57 (73%)
Frame = +2
Query: 245 DRRPRKMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 415
++ ++ GKGSF YAW +D+ ERERG+T+ +A+ ET KY V ++D+PGH+DF+
Sbjct: 283 EKEAKEKGKGSFAYAWAMDESSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFV 339
Score = 51.2 bits (117), Expect = 1e-06
Identities = 23/62 (37%), Positives = 41/62 (66%)
Frame = +1
Query: 544 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 723
+ GV+QLIV VNKMD+ YS+ RFE IK ++ S+++ + ++V ++P+S N+
Sbjct: 387 SFGVEQLIVAVNKMDAIG--YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNL 444
Query: 724 LE 729
++
Sbjct: 445 IK 446
Score = 45.2 bits (102), Expect = 7e-05
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 5/42 (11%)
Frame = +3
Query: 420 NMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTREHA 530
NMI+G +QAD A+L+V A TG FEAG+ GQT+EHA
Sbjct: 341 NMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHA 382
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 69.3 bits (162), Expect = 4e-12
Identities = 26/51 (50%), Positives = 39/51 (76%)
Frame = +2
Query: 263 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 415
+GKGSF YAW +D+ ERERGIT+ + + F+T Y+V ++D+PGH+DF+
Sbjct: 276 IGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFV 326
Score = 58.8 bits (136), Expect = 5e-09
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +1
Query: 535 LAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG 714
L + GV LIV VNKMDS E YS+ RF IK ++ ++++ GY +AVA+VPIS
Sbjct: 368 LVRSFGVDNLIVVVNKMDSVE--YSKERFNFIKSQLGAFLRSCGYKDSAVAWVPISAMEN 425
Query: 715 DNML 726
+N++
Sbjct: 426 ENLM 429
Score = 45.6 bits (103), Expect = 5e-05
Identities = 20/39 (51%), Positives = 29/39 (74%), Gaps = 2/39 (5%)
Frame = +3
Query: 420 NMITGTSQADCAVLIVAAGTGEFEAGISKN--GQTREHA 530
NMI+G +Q+D A+L++ A G FEAG+ N GQT+EH+
Sbjct: 328 NMISGATQSDAAILVIDASIGSFEAGMGINGIGQTKEHS 366
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +1
Query: 535 LAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN-PAAVAFVPISGWH 711
LA TLGV +L+V +NKMD + +S+ R++EI+ ++ ++K GYN V F+PISG
Sbjct: 85 LAKTLGVSKLVVVINKMDESTVGWSKERYDEIEGKMVPFLKSSGYNVKKDVHFLPISGLL 144
Query: 712 GDNM 723
G NM
Sbjct: 145 GTNM 148
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = +3
Query: 420 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 533
NMI+G SQAD VL+++A GEFE G + GQTREH L
Sbjct: 47 NMISGASQADIGVLVISARKGEFETGYERGGQTREHVL 84
Score = 33.1 bits (72), Expect = 0.31
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 323 RGITIDIALWKFETSKYYVTIIDAPGHRDFI 415
+G T+++ FET TI+DAPGH+ ++
Sbjct: 15 KGKTVEVGRAHFETETTRFTILDAPGHKSYV 45
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 56.0 bits (129), Expect = 4e-08
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +1
Query: 535 LAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN-PAAVAFVPISGWH 711
LA TLGV +LIV +NKMD +S+ R++EI+ ++ +++ GYN V F+PISG
Sbjct: 130 LAKTLGVAKLIVVINKMDEPTVKWSKERYDEIESKMVPFLRSSGYNVKKDVHFLPISGLL 189
Query: 712 GDNM 723
G NM
Sbjct: 190 GSNM 193
Score = 54.8 bits (126), Expect = 9e-08
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +3
Query: 420 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 533
NMI+G SQAD VL+++A GEFE G K GQTREH L
Sbjct: 92 NMISGASQADIGVLVISARKGEFETGYEKGGQTREHVL 129
Score = 37.9 bits (84), Expect = 0.011
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +2
Query: 209 GGXXKRTIEXVRDRRPRKMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTII 388
G RTI+ ++ + + S+ A+++D + ER +G T+++ FET TI+
Sbjct: 19 GQVDDRTIQKY-EKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVGRAHFETETTRFTIL 77
Query: 389 DAP----GHRDFI 415
DAP GH+ ++
Sbjct: 78 DAPVKMKGHKSYV 90
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +2
Query: 296 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIK 418
+DK E+ RGITI A ++ET+K + +D PGH D++K
Sbjct: 105 IDKAPEEKARGITIATAHVEYETAKRHYAHVDCPGHADYVK 145
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 417 RNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 533
+NMITG +Q D +L+V+A G QT+EH L
Sbjct: 145 KNMITGAAQMDGGILVVSAPDGPMP-------QTKEHIL 176
>02_04_0462 + 23131433-23132836
Length = 467
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 296 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIK 418
+D ER RGITI+ A ++ET + +D PGH D++K
Sbjct: 108 IDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVK 148
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 417 RNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 533
+NMITG +Q D A+L+V+ G QT+EH L
Sbjct: 148 KNMITGAAQMDGAILVVSGADGPMP-------QTKEHIL 179
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +2
Query: 296 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 412
+D + ERE+GITI A + Y V IID PGH DF
Sbjct: 111 MDSMDLEREKGITIQSAATYCTWNGYQVNIIDTPGHVDF 149
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 37.1 bits (82), Expect = 0.019
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 245 DRRPRKMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 412
DR R+ G + +D + ERERGITI + + + ++D PGH DF
Sbjct: 82 DRLLRQCG-ADIPHERAMDSISLERERGITIASKVTSVSWKENELNMVDTPGHADF 136
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 36.7 bits (81), Expect = 0.025
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 227 TIEXVRDRRPRKMGKGSFKYAWV-LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 403
T E V R G F+ V +D ++ E+ERGITI +K+ + IID PGH
Sbjct: 120 TTERVLYYTGRNYKIGEFQEGTVTMDWMEQEQERGITITSPPTTAFWNKHRINIIDTPGH 179
Query: 404 RDF 412
DF
Sbjct: 180 VDF 182
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 34.7 bits (76), Expect = 0.10
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +2
Query: 296 LDKLKAERERGITIDIAL----WKFETSKYYVTIIDAPGHRDF 412
LD + ERERGITI + + Y + +ID PGH DF
Sbjct: 114 LDNMDLERERGITIKLQAARMRYIMNDEPYCLNLIDTPGHVDF 156
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +2
Query: 293 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 412
++D ERERGITI + IID PGH DF
Sbjct: 156 IMDSNDLERERGITILSKNTSITYKGTKINIIDTPGHSDF 195
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 296 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 412
+D L E+ R IT+ A + V +ID+PGH DF
Sbjct: 50 MDYLDEEQRRAITMKSAAVVLHHGGHRVNLIDSPGHIDF 88
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 30.7 bits (66), Expect = 1.6
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 15/66 (22%)
Frame = +2
Query: 260 KMGKGSFKYAWVLDKLKAERERGITIDI---------------ALWKFETSKYYVTIIDA 394
K G G +Y LDKL+ ERERGIT+ A + + Y + +ID
Sbjct: 85 KKGHGQPQY---LDKLQVERERGITVKAQTATMFYRHANNQLPASDQPDAPSYLLNLIDT 141
Query: 395 PGHRDF 412
PGH DF
Sbjct: 142 PGHVDF 147
>01_01_0016 - 88825-90411
Length = 528
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 548 RVKASQGMLTGLTVLRDTSFEFTGTGSYDEHSA 450
R A +G+L L+V+ F+ TGT + D+H A
Sbjct: 246 RDHARRGLLPALSVIEPRYFDLTGTPADDDHPA 278
>09_01_0129 -
1954470-1955129,1956285-1956371,1956475-1956663,
1956772-1956900,1957386-1957472,1957572-1958036,
1959844-1959923,1961295-1961358,1961444-1961455
Length = 590
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = -1
Query: 699 NGHESDSSWVVANLLDV*GYFLLDFLKSGLTVWWFSGI-----HFVY 574
NGH +++V++N L Y LL + G ++ SG+ HFVY
Sbjct: 379 NGHYGVTTFVISNTLSSTPYLLLIAIIPGAIAYYLSGLQRQIEHFVY 425
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 636 LLDFLKSGLTVWWFSGIHFVY 574
+L+ GL VW GIHFVY
Sbjct: 234 ILEIKTGGLVVWTRGGIHFVY 254
>03_04_0206 - 18493178-18495310
Length = 710
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 574 VNKMDSTEPPYSEPRFEEIKKEV 642
VNK D T Y + EEIKKEV
Sbjct: 686 VNKFDGTFEDYKDELLEEIKKEV 708
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Frame = +2
Query: 287 AWVLDKLKAERERGITI---DIALWKF--ETSKYYVTIIDAPGHRDF 412
A V+D L+ E+ R IT+ IAL + + + V +ID+PGH DF
Sbjct: 54 ARVMDHLEEEQRRAITMKSASIALRRGGEDGGGHRVHLIDSPGHIDF 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,572,481
Number of Sequences: 37544
Number of extensions: 406728
Number of successful extensions: 1132
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -