Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_I08
(894 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 138 6e-35
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 138 6e-35
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 138 6e-35
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 134 1e-33
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 3.8
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 5.0
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 8.7
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 8.7
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 138 bits (334), Expect = 6e-35
Identities = 65/69 (94%), Positives = 65/69 (94%)
Frame = +1
Query: 535 LAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG 714
LAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG
Sbjct: 66 LAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG 125
Query: 715 DNMLEXQPK 741
DNMLE K
Sbjct: 126 DNMLEVSSK 134
Score = 83.4 bits (197), Expect = 3e-18
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +3
Query: 417 RNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALARF 542
+NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL F
Sbjct: 27 KNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 68
Score = 63.3 bits (147), Expect = 3e-12
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +2
Query: 338 DIALWKFETSKYYVTIIDAPGHRDFIK 418
DIALWKFETSKYYVTIIDAPGHRDFIK
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIK 27
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 138 bits (334), Expect = 6e-35
Identities = 65/69 (94%), Positives = 65/69 (94%)
Frame = +1
Query: 535 LAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG 714
LAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG
Sbjct: 82 LAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG 141
Query: 715 DNMLEXQPK 741
DNMLE K
Sbjct: 142 DNMLEVSSK 150
Score = 96.3 bits (229), Expect = 3e-22
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +2
Query: 290 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIK 418
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIK
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIK 43
Score = 83.4 bits (197), Expect = 3e-18
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +3
Query: 417 RNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALARF 542
+NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL F
Sbjct: 43 KNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 84
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 138 bits (334), Expect = 6e-35
Identities = 65/69 (94%), Positives = 65/69 (94%)
Frame = +1
Query: 535 LAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG 714
LAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG
Sbjct: 139 LAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG 198
Query: 715 DNMLEXQPK 741
DNMLE K
Sbjct: 199 DNMLEVSSK 207
Score = 131 bits (317), Expect = 7e-33
Identities = 61/72 (84%), Positives = 65/72 (90%)
Frame = +2
Query: 203 KCGGXXKRTIEXVRDRRPRKMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVT 382
KCGG KRTIE ++ ++MGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVT
Sbjct: 30 KCGGIDKRTIEKF-EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVT 88
Query: 383 IIDAPGHRDFIK 418
IIDAPGHRDFIK
Sbjct: 89 IIDAPGHRDFIK 100
Score = 83.4 bits (197), Expect = 3e-18
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +3
Query: 417 RNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALARF 542
+NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL F
Sbjct: 100 KNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 141
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 134 bits (323), Expect = 1e-33
Identities = 62/69 (89%), Positives = 64/69 (92%)
Frame = +1
Query: 535 LAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG 714
LAFTLGVKQLIVGVNKMD T+PPYSE RFEEIKKEVSSYIKKIGYN A+VAFVPISGWHG
Sbjct: 139 LAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVPISGWHG 198
Query: 715 DNMLEXQPK 741
DNMLE PK
Sbjct: 199 DNMLEPSPK 207
Score = 130 bits (314), Expect = 2e-32
Identities = 60/72 (83%), Positives = 65/72 (90%)
Frame = +2
Query: 203 KCGGXXKRTIEXVRDRRPRKMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVT 382
KCGG KRTIE ++ ++MGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYYVT
Sbjct: 30 KCGGIDKRTIEKF-EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVT 88
Query: 383 IIDAPGHRDFIK 418
IIDAPGHRDFIK
Sbjct: 89 IIDAPGHRDFIK 100
Score = 81.0 bits (191), Expect = 1e-17
Identities = 38/42 (90%), Positives = 39/42 (92%)
Frame = +3
Query: 417 RNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALARF 542
+NMITGTSQADCAVLIVAAG GEFEAGISKNGQTREHAL F
Sbjct: 100 KNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAF 141
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 23.0 bits (47), Expect = 3.8
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -1
Query: 585 HFVYSYDELFDTEGESEPRHAHGF 514
H +Y DE+ + G+ P H F
Sbjct: 148 HTLYKLDEIIERNGDKPPLTYHQF 171
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 377 VTIIDAPGHRDFIKKHDHR 433
VT +D PGH FI HR
Sbjct: 195 VTFLDTPGHAAFISMR-HR 212
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.8 bits (44), Expect = 8.7
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = -2
Query: 305 VCPIPKHI*RILYPFSWASCLELXRW 228
+C P H+ R+LY + ++ ++ +W
Sbjct: 271 ICWAPFHVQRLLYVYEDSTYDDINQW 296
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.8 bits (44), Expect = 8.7
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +3
Query: 699 FWMARRQHVGASTK 740
+W+ +R+H +STK
Sbjct: 593 YWLEKREHRSSSTK 606
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,573
Number of Sequences: 438
Number of extensions: 4177
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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