Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_I04
(864 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GZJ8 Cluster: Mre11; n=1; Bombyx mori|Rep: Mre11 - Bo... 286 4e-76
UniRef50_UPI0000D566D3 Cluster: PREDICTED: similar to CG16928-PA... 198 1e-49
UniRef50_UPI00015B5FB8 Cluster: PREDICTED: similar to meiotic re... 194 2e-48
UniRef50_A7SIW1 Cluster: Predicted protein; n=1; Nematostella ve... 194 3e-48
UniRef50_UPI0000DB6F19 Cluster: PREDICTED: similar to meiotic re... 189 7e-47
UniRef50_Q9XYZ4 Cluster: CG16928-PA; n=5; Diptera|Rep: CG16928-P... 188 2e-46
UniRef50_P49959 Cluster: Double-strand break repair protein MRE1... 174 2e-42
UniRef50_Q54BN2 Cluster: DNA repair exonuclease; n=1; Dictyostel... 172 1e-41
UniRef50_Q09683 Cluster: DNA repair protein rad32; n=1; Schizosa... 172 1e-41
UniRef50_Q9C291 Cluster: Double-strand break repair protein mus-... 171 1e-41
UniRef50_Q0MR25 Cluster: MRE11-like protein; n=1; Penicillium ma... 168 2e-40
UniRef50_A1CU25 Cluster: Meiotic recombination protein Mre11; n=... 167 3e-40
UniRef50_A5E785 Cluster: Putative uncharacterized protein; n=1; ... 164 2e-39
UniRef50_Q6BL74 Cluster: Debaryomyces hansenii chromosome F of s... 161 3e-38
UniRef50_Q6CEM3 Cluster: Yarrowia lipolytica chromosome B of str... 149 7e-35
UniRef50_A5DLP0 Cluster: Putative uncharacterized protein; n=1; ... 149 7e-35
UniRef50_Q9UVN9 Cluster: Double-strand break repair protein MRE1... 149 1e-34
UniRef50_P32829 Cluster: Double-strand break repair protein MRE1... 148 2e-34
UniRef50_UPI00015B5FB6 Cluster: PREDICTED: similar to endo/exonu... 144 3e-33
UniRef50_Q23255 Cluster: Double-strand break repair protein mre-... 143 4e-33
UniRef50_Q9XGM2 Cluster: Double-strand break repair protein MRE1... 143 6e-33
UniRef50_Q016A4 Cluster: Mre11 protein; n=3; Ostreococcus|Rep: M... 141 2e-32
UniRef50_Q6ZBS2 Cluster: Putative DNA repair and meiosis protein... 140 5e-32
UniRef50_A4HFW3 Cluster: Endo/exonuclease Mre11, putative; n=5; ... 139 1e-31
UniRef50_Q5KHA6 Cluster: Meiotic DNA double-strand break process... 138 1e-31
UniRef50_Q8SRV0 Cluster: DOUBLE-STRAND BREAK DNA REPAIR PROTEIN;... 136 9e-31
UniRef50_Q4P5A9 Cluster: Putative uncharacterized protein; n=1; ... 134 4e-30
UniRef50_Q586P4 Cluster: Endo/exonuclease Mre11; n=3; Trypanosom... 130 4e-29
UniRef50_A3FQD2 Cluster: DNA repair and meiosis protein Mre11; n... 127 3e-28
UniRef50_A5YZR9 Cluster: MRE11B; n=2; Magnoliophyta|Rep: MRE11B ... 117 4e-25
UniRef50_Q86C23 Cluster: Mre11; n=2; Entamoeba histolytica|Rep: ... 113 7e-24
UniRef50_Q4U965 Cluster: Double-strand break repair protein, put... 111 2e-23
UniRef50_A5K9T7 Cluster: DNA repair exonuclease, putative; n=1; ... 109 1e-22
UniRef50_Q22G12 Cluster: Ser/Thr protein phosphatase family prot... 108 2e-22
UniRef50_A7AP02 Cluster: DNA repair protein (Mre11) family prote... 107 5e-22
UniRef50_Q8I263 Cluster: DNA repair exonuclease, putative; n=1; ... 102 1e-20
UniRef50_Q7RBG7 Cluster: Rad32-related; n=6; Plasmodium (Vinckei... 102 1e-20
UniRef50_A0DUM4 Cluster: Chromosome undetermined scaffold_64, wh... 100 9e-20
UniRef50_A2ECB0 Cluster: Ser/Thr protein phosphatase, putative; ... 86 1e-15
UniRef50_UPI000049A054 Cluster: DNA repair protein rad32; n=1; E... 73 1e-11
UniRef50_Q8PUY5 Cluster: DNA double-strand break repair protein ... 54 6e-06
UniRef50_Q46FJ9 Cluster: DNA repair protein; n=1; Methanosarcina... 53 8e-06
UniRef50_Q8U1N9 Cluster: DNA double-strand break repair protein ... 50 6e-05
UniRef50_A4ENU6 Cluster: Putative ATP-dependent dsDNA exonucleas... 50 1e-04
UniRef50_A5YS39 Cluster: DNA double-strand break repair protein ... 49 1e-04
UniRef50_A2BM15 Cluster: Predicted DNA repair exonuclease; n=1; ... 47 5e-04
UniRef50_A3HX94 Cluster: DNA repair exonuclease; n=1; Algoriphag... 47 7e-04
UniRef50_Q2JK75 Cluster: Ser/Thr protein phosphatase family prot... 46 0.001
UniRef50_Q3ISN6 Cluster: Conserved DNA repair operon protein; n=... 46 0.001
UniRef50_Q12VW7 Cluster: Metallophosphoesterase; n=1; Methanococ... 46 0.001
UniRef50_O29231 Cluster: DNA double-strand break repair protein ... 46 0.001
UniRef50_Q9UZC9 Cluster: DNA double-strand break repair protein ... 45 0.002
UniRef50_Q8DMQ1 Cluster: Tll0060 protein; n=1; Synechococcus elo... 44 0.005
UniRef50_Q8TXI3 Cluster: DNA double-strand break repair protein ... 44 0.005
UniRef50_Q2NFC6 Cluster: DNA double-strand break repair protein ... 44 0.007
UniRef50_A7BEB8 Cluster: Putative uncharacterized protein; n=1; ... 42 0.020
UniRef50_Q03B99 Cluster: DNA repair exonuclease; n=4; Lactobacil... 42 0.027
UniRef50_O26641 Cluster: DNA double-strand break repair protein ... 42 0.027
UniRef50_O67727 Cluster: ATP-dependent dsDNA exonuclease; n=1; A... 41 0.035
UniRef50_Q0HTQ0 Cluster: Nuclease SbcCD, D subunit precursor; n=... 41 0.035
UniRef50_Q9YFY8 Cluster: DNA double-strand break repair protein ... 41 0.035
UniRef50_Q5LYZ3 Cluster: ATP-dependent dsDNA exonuclease; n=6; S... 41 0.046
UniRef50_A6UUX3 Cluster: Metallophosphoesterase; n=1; Methanococ... 40 0.061
UniRef50_Q9HRW4 Cluster: DNA double-strand break repair protein ... 40 0.061
UniRef50_Q3A5P7 Cluster: DNA repair exonuclease; n=1; Pelobacter... 40 0.081
UniRef50_Q7QVF9 Cluster: GLP_90_7352_9805; n=3; Giardia intestin... 40 0.081
UniRef50_A0RW71 Cluster: DNA repair exonuclease; n=1; Cenarchaeu... 40 0.081
UniRef50_UPI00015BCD31 Cluster: UPI00015BCD31 related cluster; n... 40 0.11
UniRef50_Q88WS0 Cluster: Exonuclease SbcD; n=2; Lactobacillales|... 40 0.11
UniRef50_A7DNM9 Cluster: Metallophosphoesterase; n=1; Candidatus... 40 0.11
UniRef50_A5UJE8 Cluster: DNA repair exonuclease (SbcD/Mre11-fami... 40 0.11
UniRef50_A7HL21 Cluster: Metallophosphoesterase; n=1; Fervidobac... 39 0.14
UniRef50_Q9AN75 Cluster: ID473; n=1; Bradyrhizobium japonicum|Re... 39 0.19
UniRef50_A6TVN1 Cluster: Nuclease SbcCD, D subunit; n=3; Clostri... 39 0.19
UniRef50_UPI00015BAD8F Cluster: metallophosphoesterase; n=1; Ign... 38 0.25
UniRef50_Q5XUC9 Cluster: Zona pellucida C related protein; n=4; ... 38 0.25
UniRef50_Q2AI56 Cluster: Exonuclease SbcD; n=1; Halothermothrix ... 38 0.25
UniRef50_Q2AE44 Cluster: Metallophosphoesterase; n=1; Halothermo... 38 0.25
UniRef50_Q67MD2 Cluster: DNA repair exonuclease; n=1; Symbiobact... 38 0.33
UniRef50_A4YET4 Cluster: Metallophosphoesterase; n=1; Metallosph... 38 0.33
UniRef50_Q3ICS5 Cluster: Exonuclease sbcCD subunit D; n=2; Alter... 38 0.43
UniRef50_Q6I2G3 Cluster: DNA repair exonuclease family protein; ... 38 0.43
UniRef50_A7HCA1 Cluster: Nuclease SbcCD, D subunit; n=1; Anaerom... 38 0.43
UniRef50_A6Q875 Cluster: DNA double-strand break repair protein;... 38 0.43
UniRef50_A6P235 Cluster: Putative uncharacterized protein; n=1; ... 38 0.43
UniRef50_Q8TNC7 Cluster: Phosphoesterase; n=2; Methanosarcina|Re... 38 0.43
UniRef50_Q8Y6N8 Cluster: Lmo1646 protein; n=12; Listeria|Rep: Lm... 37 0.57
UniRef50_Q1FMZ5 Cluster: Nuclease SbcCD, D subunit; n=1; Clostri... 37 0.57
UniRef50_A0LM47 Cluster: Nuclease SbcCD, D subunit; n=1; Syntrop... 37 0.57
UniRef50_Q6L2H7 Cluster: DNA repair protein; n=2; Thermoplasmata... 37 0.57
UniRef50_P62132 Cluster: DNA double-strand break repair protein ... 37 0.57
UniRef50_Q830T2 Cluster: Exonuclease SbcD; n=3; Lactobacillales|... 36 1.0
UniRef50_Q74D96 Cluster: Nuclease SbcCD, D subunit, putative; n=... 36 1.0
UniRef50_Q2RL80 Cluster: Metallophosphoesterase; n=1; Moorella t... 36 1.0
UniRef50_P62131 Cluster: DNA double-strand break repair protein ... 36 1.0
UniRef50_Q3ADJ2 Cluster: Ser/Thr protein phosphatase family prot... 36 1.3
UniRef50_A5ZTK8 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_A0P1W8 Cluster: Putative DNA repair exonuclease; n=1; S... 36 1.3
UniRef50_Q9X1X0 Cluster: Exonuclease, putative; n=3; Thermotoga|... 36 1.7
UniRef50_Q3W6X0 Cluster: Exonuclease SbcD; n=3; Actinomycetales|... 36 1.7
UniRef50_Q04FF3 Cluster: DNA repair exonuclease; n=2; Oenococcus... 36 1.7
UniRef50_A3H5S8 Cluster: Metallophosphoesterase; n=1; Caldivirga... 36 1.7
UniRef50_Q897Z1 Cluster: Exonuclease sbcD; n=2; Clostridium|Rep:... 35 2.3
UniRef50_Q5SIS5 Cluster: Exonuclease SbcD; n=2; Thermus thermoph... 35 2.3
UniRef50_Q2S4Q6 Cluster: Nuclease SbcCD, D subunit subfamily, pu... 35 2.3
UniRef50_A5EW10 Cluster: Exonuclease SbcD; n=1; Dichelobacter no... 35 2.3
UniRef50_A1R7R7 Cluster: Putative nuclease SbcCD, D subunit; n=1... 35 2.3
UniRef50_A1S0I8 Cluster: Metallophosphoesterase; n=1; Thermofilu... 35 2.3
UniRef50_UPI00015C5C4B Cluster: hypothetical protein CKO_02773; ... 35 3.1
UniRef50_Q9RT45 Cluster: Exonuclease SbcD, putative; n=2; Deinoc... 35 3.1
UniRef50_Q8EP66 Cluster: Exonuclease; n=13; Bacillaceae|Rep: Exo... 35 3.1
UniRef50_Q7UKG1 Cluster: Probable phosphoesterase yhaO-putative ... 35 3.1
UniRef50_Q5P494 Cluster: Exonuclease SbcD; n=1; Azoarcus sp. EbN... 35 3.1
UniRef50_Q38Y02 Cluster: Putative metallo-phosphoesterase; n=1; ... 35 3.1
UniRef50_A5WEF9 Cluster: Nuclease SbcCD, D subunit; n=3; Psychro... 35 3.1
UniRef50_Q65LT8 Cluster: YhaO; n=4; Bacillus|Rep: YhaO - Bacillu... 34 4.0
UniRef50_Q2IN32 Cluster: Nuclease SbcCD, D subunit; n=2; Myxococ... 34 4.0
UniRef50_Q1NCL0 Cluster: Nuclease SbcCD, D subunit; n=1; Sphingo... 34 4.0
UniRef50_A5IKC9 Cluster: Putative uncharacterized protein; n=1; ... 34 4.0
UniRef50_A3WLK0 Cluster: Exonuclease SbcD, putative; n=1; Idioma... 34 4.0
UniRef50_Q03QD8 Cluster: DNA repair exonuclease; n=1; Lactobacil... 34 5.3
UniRef50_A6WB40 Cluster: Metallophosphoesterase; n=1; Kineococcu... 34 5.3
UniRef50_A5IU09 Cluster: Metallophosphoesterase; n=16; Staphyloc... 34 5.3
UniRef50_A1SK69 Cluster: Nuclease SbcCD, D subunit; n=2; Actinom... 34 5.3
UniRef50_A1K1W1 Cluster: Exonuclease SbcD, putative; n=4; Betapr... 34 5.3
UniRef50_Q3IPC0 Cluster: Putative uncharacterized protein; n=1; ... 34 5.3
UniRef50_Q1VZW8 Cluster: Exonuclease SbcD; n=1; Psychroflexus to... 33 7.1
UniRef50_A7DFW6 Cluster: Nuclease SbcCD, D subunit; n=3; Alphapr... 33 7.1
UniRef50_A3YYZ0 Cluster: Putative exonuclease; n=1; Synechococcu... 33 7.1
UniRef50_A3I3N6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_Q9A4M3 Cluster: Tryptophan halogenase, putative; n=6; A... 33 9.3
UniRef50_Q2K465 Cluster: Putative sensory box/GGDEF family prote... 33 9.3
UniRef50_A5VL00 Cluster: Metallophosphoesterase; n=2; Lactobacil... 33 9.3
UniRef50_A5KQM8 Cluster: Putative uncharacterized protein; n=1; ... 33 9.3
UniRef50_A3S327 Cluster: Possible general (Type II) secretion pa... 33 9.3
>UniRef50_Q9GZJ8 Cluster: Mre11; n=1; Bombyx mori|Rep: Mre11 -
Bombyx mori (Silk moth)
Length = 610
Score = 286 bits (702), Expect = 4e-76
Identities = 134/142 (94%), Positives = 134/142 (94%)
Frame = +2
Query: 434 KIFQXTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHV 613
K F TVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHV
Sbjct: 101 KNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHV 160
Query: 614 RISPVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADR 793
RISPVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADR
Sbjct: 161 RISPVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADR 220
Query: 794 GHSNYIPEGVLXNFLDLVVWGH 859
GHSNYIPEGVL F VVWGH
Sbjct: 221 GHSNYIPEGVLPTFRS-VVWGH 241
Score = 221 bits (539), Expect = 2e-56
Identities = 104/104 (100%), Positives = 104/104 (100%)
Frame = +1
Query: 133 MIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG 312
MIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG
Sbjct: 1 MIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG 60
Query: 313 GDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFS 444
GDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFS
Sbjct: 61 GDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFS 104
>UniRef50_UPI0000D566D3 Cluster: PREDICTED: similar to CG16928-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG16928-PA - Tribolium castaneum
Length = 555
Score = 198 bits (483), Expect = 1e-49
Identities = 82/137 (59%), Positives = 110/137 (80%)
Frame = +2
Query: 449 TVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPV 628
+VNYEDPN+N+S PI SIHGNHDDP G+ VS+LD+ S GLVNYFG+W D T V I+P+
Sbjct: 102 SVNYEDPNINVSIPIFSIHGNHDDPTGKNHVSALDLFSSMGLVNYFGRWDDVTKVEINPI 161
Query: 629 LLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSNY 808
LL+KG ++LALYGLSH++D+RL+RLF +KKV + P++ DWFN+F+LHQN A+RG N+
Sbjct: 162 LLKKGDSKLALYGLSHIRDERLARLFLDKKVVTKTPEDLNDWFNVFILHQNRANRGAKNF 221
Query: 809 IPEGVLXNFLDLVVWGH 859
I + + F+DLV+WGH
Sbjct: 222 IADSFIPEFIDLVMWGH 238
Score = 108 bits (259), Expect = 2e-22
Identities = 50/98 (51%), Positives = 69/98 (70%)
Frame = +1
Query: 160 SPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 339
S +T RIL+A+D+HLG+ N+ +R D+F FEE+L +A + VD ILLGGDLF +A+P
Sbjct: 4 SEANTFRILLATDLHLGYGLNNSIRENDTFRTFEEILQIANKEKVDFILLGGDLFHEARP 63
Query: 340 SVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSXNS 453
+ +C+ K E+IRKYC GDKPV IE SD +F N+
Sbjct: 64 TPHCIKKTIELIRKYCFGDKPVEIEFFSDPSLHFPGNA 101
>UniRef50_UPI00015B5FB8 Cluster: PREDICTED: similar to meiotic
recombination repair protein 11 (mre11); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to meiotic
recombination repair protein 11 (mre11) - Nasonia
vitripennis
Length = 664
Score = 194 bits (474), Expect = 2e-48
Identities = 83/139 (59%), Positives = 107/139 (76%)
Frame = +2
Query: 443 QXTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRIS 622
Q VN+EDPNLN+ P+ SIHGNHDDP G G+V S+D+LS TGL+NYFGKWTD T V I+
Sbjct: 129 QKVVNFEDPNLNVGIPVFSIHGNHDDPTGYGAVGSMDVLSATGLINYFGKWTDVTQVSIA 188
Query: 623 PVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHS 802
P+L++KG+T +ALYGLS++ DQRLSRL K M R D+ D FN+FVLHQN A +
Sbjct: 189 PLLIRKGVTTIALYGLSYMNDQRLSRLMRNNKFHMLRTDKADDPFNIFVLHQNRAMHSQN 248
Query: 803 NYIPEGVLXNFLDLVVWGH 859
+Y+PE +L +F++LVVWGH
Sbjct: 249 SYVPENLLPDFINLVVWGH 267
Score = 100 bits (240), Expect = 4e-20
Identities = 47/93 (50%), Positives = 65/93 (69%)
Frame = +1
Query: 166 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 345
++ +++LIA+DIHLG+ E R +DSF FEE+L A +VD++LLGGDLF +AKP
Sbjct: 34 ENIMKVLIATDIHLGY-EQTTKREDDSFRTFEEILQYARDHEVDMVLLGGDLFHEAKPPH 92
Query: 346 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFS 444
N + KC E++R YCL DKPV I+ L+D FS
Sbjct: 93 NVVMKCLELLRTYCLNDKPVKIQFLTDPEAVFS 125
>UniRef50_A7SIW1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 720
Score = 194 bits (472), Expect = 3e-48
Identities = 86/137 (62%), Positives = 104/137 (75%), Gaps = 1/137 (0%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVL 631
VNYEDPNLN+S P+ SIHGNHDDP G+G++ +LD+LS+ GLVNYFG+ + +SP+L
Sbjct: 147 VNYEDPNLNVSIPVFSIHGNHDDPAGEGNLCALDLLSVCGLVNYFGRPASVDDITVSPLL 206
Query: 632 LQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQNHADRGHSNY 808
LQKG T+LALYGL ++D+RL R F KV+M RP E D WFN FVLHQN A GH+NY
Sbjct: 207 LQKGATKLALYGLGSVRDERLHRTFVNNKVKMLRPKEDPDSWFNAFVLHQNRAKHGHTNY 266
Query: 809 IPEGVLXNFLDLVVWGH 859
IPE L FLDLVVWGH
Sbjct: 267 IPEKFLDTFLDLVVWGH 283
Score = 106 bits (254), Expect = 8e-22
Identities = 48/94 (51%), Positives = 65/94 (69%)
Frame = +1
Query: 169 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 348
+TL ILIA+D+HLG+ E D VRG DSF+ FEE L +A + +VD ILLGGDL+ + KPS
Sbjct: 49 NTLSILIATDVHLGYAEKDQVRGNDSFVTFEETLQIAKKRNVDFILLGGDLYHENKPSRR 108
Query: 349 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSXN 450
+ + RK+C+GD+ +E LSDQ NF+ N
Sbjct: 109 TLHASMALFRKFCMGDRVCEVEFLSDQSINFANN 142
>UniRef50_UPI0000DB6F19 Cluster: PREDICTED: similar to meiotic
recombination 11 CG16928-PA; n=1; Apis mellifera|Rep:
PREDICTED: similar to meiotic recombination 11
CG16928-PA - Apis mellifera
Length = 501
Score = 189 bits (461), Expect = 7e-47
Identities = 82/137 (59%), Positives = 105/137 (76%)
Frame = +2
Query: 449 TVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPV 628
TVNYEDPNLNIS PI SIHGNHDDP G++ S+D+LS++GL+NYFGKWTD T + I P+
Sbjct: 116 TVNYEDPNLNISMPIFSIHGNHDDP-SFGAIGSMDLLSVSGLINYFGKWTDLTKINIPPL 174
Query: 629 LLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSNY 808
+++KG T +ALYGLS++ DQRLSRL + K++M RP E D FN+FVLHQN A Y
Sbjct: 175 IIKKGETHIALYGLSYINDQRLSRLLRDFKIDMLRPTEITDCFNIFVLHQNRAKHDEYTY 234
Query: 809 IPEGVLXNFLDLVVWGH 859
IP+ L FL+L++WGH
Sbjct: 235 IPQNKLPKFLNLIIWGH 251
Score = 107 bits (257), Expect = 4e-22
Identities = 52/103 (50%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Frame = +1
Query: 124 SKIMIENDISAWSPDDTLRILIASDIHLGFMENDP--VRGEDSFIAFEEVLSLAVQCDVD 297
S I N +PDD+++ILIA+DIHLGF N + EDSFI FEE+L + +VD
Sbjct: 2 SSTPINNKNEKRNPDDSIKILIATDIHLGFEYNKKRGQQSEDSFITFEEILQYGKEYEVD 61
Query: 298 LILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSD 426
ILLGGDLF KPS + +C E++RKYCLG K + I+ LSD
Sbjct: 62 FILLGGDLFHDTKPSQTAILRCMELLRKYCLGTKEIKIQFLSD 104
>UniRef50_Q9XYZ4 Cluster: CG16928-PA; n=5; Diptera|Rep: CG16928-PA -
Drosophila melanogaster (Fruit fly)
Length = 620
Score = 188 bits (457), Expect = 2e-46
Identities = 88/149 (59%), Positives = 110/149 (73%), Gaps = 12/149 (8%)
Frame = +2
Query: 449 TVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPV 628
+VNYEDPNLNI+ P+ SIHGNHDDP G G +SSLD+LS +GLVNYFG+WTD T V ISPV
Sbjct: 110 SVNYEDPNLNIAIPVFSIHGNHDDPSGFGRLSSLDLLSTSGLVNYFGRWTDLTQVEISPV 169
Query: 629 LLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPD------------ETLDWFNLFVL 772
L++KG ++LALYGLSH+ D RL+RL + KV+ P+ E DWF+L V+
Sbjct: 170 LMRKGESQLALYGLSHIHDGRLARLIKDFKVKFNCPENVANGEDGNESKEEEDWFHLLVV 229
Query: 773 HQNHADRGHSNYIPEGVLXNFLDLVVWGH 859
HQN ADRG NY+PE +L +FL LV+WGH
Sbjct: 230 HQNRADRGPKNYLPEDLLPSFLHLVIWGH 258
Score = 124 bits (298), Expect = 4e-27
Identities = 56/88 (63%), Positives = 70/88 (79%)
Frame = +1
Query: 166 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 345
D+ +RIL+A+D HLG+ E D VRGEDSF AFEE+L LAV DVD+ILLGGDLF A PS
Sbjct: 12 DNVIRILVATDNHLGYGEKDAVRGEDSFTAFEEILELAVSEDVDMILLGGDLFHDAVPSQ 71
Query: 346 NCMFKCTEIIRKYCLGDKPVSIELLSDQ 429
N + KC E++R+Y GD+PVS+E+LSDQ
Sbjct: 72 NALHKCIELLRRYTFGDRPVSLEILSDQ 99
>UniRef50_P49959 Cluster: Double-strand break repair protein MRE11A;
n=42; Deuterostomia|Rep: Double-strand break repair
protein MRE11A - Homo sapiens (Human)
Length = 708
Score = 174 bits (424), Expect = 2e-42
Identities = 79/137 (57%), Positives = 100/137 (72%), Gaps = 1/137 (0%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVL 631
VNY+D NLNIS P+ SIHGNHDDP G ++ +LDILS G VN+FG+ + ISPVL
Sbjct: 109 VNYQDGNLNISIPVFSIHGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVL 168
Query: 632 LQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQNHADRGHSNY 808
LQKG T++ALYGL + D+RL R+F KKV M RP E + WFNLFV+HQN + G +N+
Sbjct: 169 LQKGSTKIALYGLGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNF 228
Query: 809 IPEGVLXNFLDLVVWGH 859
IPE L +F+DLV+WGH
Sbjct: 229 IPEQFLDDFIDLVIWGH 245
Score = 121 bits (292), Expect = 2e-26
Identities = 53/96 (55%), Positives = 71/96 (73%)
Frame = +1
Query: 154 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 333
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 334 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNF 441
KPS + C E++RKYC+GD+PV E+LSDQ NF
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNF 101
>UniRef50_Q54BN2 Cluster: DNA repair exonuclease; n=1; Dictyostelium
discoideum AX4|Rep: DNA repair exonuclease -
Dictyostelium discoideum AX4
Length = 689
Score = 172 bits (418), Expect = 1e-41
Identities = 73/138 (52%), Positives = 102/138 (73%), Gaps = 1/138 (0%)
Frame = +2
Query: 449 TVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPV 628
TVNYEDPN NIS PI SIHGNHDDP G+G +++LD+LS++ LVNYFGK D + + P+
Sbjct: 137 TVNYEDPNFNISLPIFSIHGNHDDPTGEGGLAALDLLSVSNLVNYFGKTEDIDDITVYPL 196
Query: 629 LLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQNHADRGHSN 805
LL KG T++A+YGL +++D+RL R F ++ V++ RP E+ D WFN+ VLHQN N
Sbjct: 197 LLGKGETKIAIYGLGNIRDERLHRTFQKQSVKLMRPVESKDEWFNILVLHQNRVAHNPKN 256
Query: 806 YIPEGVLXNFLDLVVWGH 859
Y+ E ++ +F+D V+WGH
Sbjct: 257 YVHEKMIESFIDFVLWGH 274
Score = 120 bits (289), Expect = 5e-26
Identities = 52/90 (57%), Positives = 69/90 (76%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 354
+RIL+A+D HLG++E DP+RG+DSF +FEE+L A VD++LLGGDLF KPS +C+
Sbjct: 43 MRILVATDNHLGYLERDPIRGDDSFNSFEEILKYAHTLKVDMVLLGGDLFHDNKPSRSCL 102
Query: 355 FKCTEIIRKYCLGDKPVSIELLSDQIKNFS 444
++ E+ RKYCLGD PV I+ LSDQ NFS
Sbjct: 103 YRTMELFRKYCLGDSPVRIQFLSDQSVNFS 132
>UniRef50_Q09683 Cluster: DNA repair protein rad32; n=1;
Schizosaccharomyces pombe|Rep: DNA repair protein rad32
- Schizosaccharomyces pombe (Fission yeast)
Length = 649
Score = 172 bits (418), Expect = 1e-41
Identities = 73/137 (53%), Positives = 101/137 (73%), Gaps = 1/137 (0%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVL 631
+NY DPN+N++ P+ SIHGNHDDP G G S+LDIL +TGLVNYFG+ + ++ +SP+L
Sbjct: 114 INYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVSPIL 173
Query: 632 LQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQNHADRGHSNY 808
LQKG T+LALYG+S+++D+RL F E KV+ RPD D WFNL +HQNH+ ++Y
Sbjct: 174 LQKGFTKLALYGISNVRDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSY 233
Query: 809 IPEGVLXNFLDLVVWGH 859
+PE + +F D V+WGH
Sbjct: 234 LPESFIQDFYDFVLWGH 250
Score = 107 bits (256), Expect = 5e-22
Identities = 47/87 (54%), Positives = 65/87 (74%)
Frame = +1
Query: 166 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 345
++T+RILI+SD H+G+ E DPVRG DSF++F E+L +A + DVD+ILLGGD+F KPS
Sbjct: 15 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSR 74
Query: 346 NCMFKCTEIIRKYCLGDKPVSIELLSD 426
+++ +R CLGDKP +ELLSD
Sbjct: 75 KALYQALRSLRLNCLGDKPCELELLSD 101
>UniRef50_Q9C291 Cluster: Double-strand break repair protein mus-23;
n=5; Pezizomycotina|Rep: Double-strand break repair
protein mus-23 - Neurospora crassa
Length = 760
Score = 171 bits (417), Expect = 1e-41
Identities = 71/137 (51%), Positives = 100/137 (72%), Gaps = 1/137 (0%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVL 631
VNYEDP++N++ P+ SIHGNHDDP G G SLD+L GLVNYFG+ + ++ + P+L
Sbjct: 125 VNYEDPDINVAIPVFSIHGNHDDPSGDGHYCSLDLLQAAGLVNYFGRVPEADNIHVKPIL 184
Query: 632 LQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETL-DWFNLFVLHQNHADRGHSNY 808
LQKG T++ALYGLS+++D+R+ R F + KV RP++ DWFNL LHQNH ++Y
Sbjct: 185 LQKGRTKMALYGLSNVRDERMHRTFRDNKVRFYRPNQQKNDWFNLLALHQNHYAHTRTSY 244
Query: 809 IPEGVLXNFLDLVVWGH 859
+ E +L +F+DLV+WGH
Sbjct: 245 VAENMLPDFMDLVIWGH 261
Score = 99.1 bits (236), Expect = 1e-19
Identities = 43/91 (47%), Positives = 65/91 (71%)
Frame = +1
Query: 169 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 348
DT+RIL+++D H+G+ E PVR +DS+ F+E++ +A + DVD++LLGGDLF + KPS
Sbjct: 28 DTIRILVSTDNHVGYAERHPVRKDDSWRTFDEIMQIAKKQDVDMVLLGGDLFHENKPSRK 87
Query: 349 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNF 441
M++ +RK+CLG KP +E LSD + F
Sbjct: 88 SMYQVMRSLRKHCLGMKPCELEFLSDAAEVF 118
>UniRef50_Q0MR25 Cluster: MRE11-like protein; n=1; Penicillium
marneffei|Rep: MRE11-like protein - Penicillium
marneffei
Length = 731
Score = 168 bits (408), Expect = 2e-40
Identities = 71/137 (51%), Positives = 103/137 (75%), Gaps = 1/137 (0%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVL 631
VNYED ++N++ P+ SIHGNHDDP G+G +++LDIL ++GL+NY+G+ + ++++ PVL
Sbjct: 93 VNYEDLDINVAIPVFSIHGNHDDPSGEGHLAALDILQVSGLLNYYGRTPESDNIQVKPVL 152
Query: 632 LQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPD-ETLDWFNLFVLHQNHADRGHSNY 808
LQKG T+LALYGLS+++D+RL R F + KV+ +P + DWFNL +HQNH + Y
Sbjct: 153 LQKGRTKLALYGLSNVRDERLFRTFRDGKVKFFQPSVQKEDWFNLICVHQNHHAYTETGY 212
Query: 809 IPEGVLXNFLDLVVWGH 859
+PE L FLDLV+WGH
Sbjct: 213 LPENFLPEFLDLVIWGH 229
Score = 72.5 bits (170), Expect = 1e-11
Identities = 31/66 (46%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +1
Query: 169 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF-DQAKPSV 345
DT+RIL+++D H+G+ E DP+RG+DS+ F E++ LA + DVD++LL GDLF + P+
Sbjct: 14 DTIRILVSTDNHVGYNERDPIRGDDSWKTFHEIMCLAKERDVDMVLLAGDLFHENNHPAN 73
Query: 346 NCMFKC 363
C+ C
Sbjct: 74 PCIKSC 79
>UniRef50_A1CU25 Cluster: Meiotic recombination protein Mre11; n=14;
Pezizomycotina|Rep: Meiotic recombination protein Mre11
- Aspergillus clavatus
Length = 816
Score = 167 bits (406), Expect = 3e-40
Identities = 71/137 (51%), Positives = 102/137 (74%), Gaps = 1/137 (0%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVL 631
VNYED ++N++ PI SIHGNHDDP G+G +++LD+L ++GL+NY+G+ + ++ I PVL
Sbjct: 122 VNYEDLDINVAIPIFSIHGNHDDPSGEGHLAALDLLQVSGLLNYYGRTPESDNIHIKPVL 181
Query: 632 LQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPD-ETLDWFNLFVLHQNHADRGHSNY 808
LQKG T+LALYG+S+++D+RL R F + KV+ +P + DWFNL +HQNH + Y
Sbjct: 182 LQKGRTKLALYGMSNVRDERLFRTFRDGKVKFYQPSIQKNDWFNLMCVHQNHHAYTETGY 241
Query: 809 IPEGVLXNFLDLVVWGH 859
+PE L FLDLV+WGH
Sbjct: 242 LPENFLPEFLDLVIWGH 258
Score = 106 bits (254), Expect = 8e-22
Identities = 47/91 (51%), Positives = 67/91 (73%)
Frame = +1
Query: 169 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 348
+T+RIL+A+D H+G+ E DP+RG+DS+ +F EV+ LA + DVD++LL GDLF + KPS
Sbjct: 25 ETIRILVATDNHVGYNERDPIRGDDSWKSFHEVMCLARERDVDMVLLAGDLFHENKPSRK 84
Query: 349 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNF 441
M++ IR CLGDKP +E+LSD +NF
Sbjct: 85 SMYQVMRSIRMNCLGDKPCELEMLSDASENF 115
>UniRef50_A5E785 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 669
Score = 164 bits (399), Expect = 2e-39
Identities = 72/139 (51%), Positives = 99/139 (71%), Gaps = 3/139 (2%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTH--VRISP 625
VNYEDPNLNIS P+ +I+GNHDD G+G +S+LD+L+++GL+NYFGK D H + P
Sbjct: 109 VNYEDPNLNISVPVFAINGNHDDATGEGMLSALDVLAVSGLINYFGKTRDNNHDTYLVKP 168
Query: 626 VLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPD-ETLDWFNLFVLHQNHADRGHS 802
+LLQKG T+ ALYG+S+++D++L RLF + +V ERP T +WFN HQNHA
Sbjct: 169 ILLQKGSTKFALYGMSNVRDEKLHRLFRDGEVRFERPGLHTDEWFNFLAFHQNHAVHTFK 228
Query: 803 NYIPEGVLXNFLDLVVWGH 859
+ IPE L +FL ++WGH
Sbjct: 229 SSIPENYLPHFLHFILWGH 247
Score = 96.3 bits (229), Expect = 9e-19
Identities = 41/86 (47%), Positives = 62/86 (72%)
Frame = +1
Query: 169 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 348
DTL+IL+ +D H+G++ENDP+RG+DS+ F+E+ LA DVD+I+ GGDLF KP+
Sbjct: 12 DTLKILLTTDNHVGYLENDPIRGDDSWKTFDEITRLARDHDVDMIIQGGDLFHINKPTKK 71
Query: 349 CMFKCTEIIRKYCLGDKPVSIELLSD 426
M+ + +R C+GD+P +ELLS+
Sbjct: 72 SMYHVMKSLRANCMGDRPCELELLSE 97
>UniRef50_Q6BL74 Cluster: Debaryomyces hansenii chromosome F of
strain CBS767 of Debaryomyces hansenii; n=3;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
F of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 688
Score = 161 bits (390), Expect = 3e-38
Identities = 69/138 (50%), Positives = 98/138 (71%), Gaps = 1/138 (0%)
Frame = +2
Query: 449 TVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPV 628
TVNYEDPN+NIS P+ +I GNHDD G+G + LD+LS +GL+N+FGK + + +SP+
Sbjct: 108 TVNYEDPNINISVPVFAISGNHDDATGEGFLLPLDLLSASGLINHFGKVPNNEELTVSPL 167
Query: 629 LLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLD-WFNLFVLHQNHADRGHSN 805
+ QKG ++LALYGL++++D+RL RLF + V+ RP D WFN+ +HQNH ++
Sbjct: 168 IFQKGASKLALYGLANVRDERLHRLFRDGNVKFLRPSSQADEWFNILCVHQNHVPHTRTS 227
Query: 806 YIPEGVLXNFLDLVVWGH 859
Y+PE L FL+ VVWGH
Sbjct: 228 YLPEQFLPKFLNFVVWGH 245
Score = 105 bits (251), Expect = 2e-21
Identities = 48/89 (53%), Positives = 64/89 (71%)
Frame = +1
Query: 160 SPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 339
S DT+RILI +D H+G+ ENDP+RG+DS+ FEE+ S+A + DVD+IL GGDLF KP
Sbjct: 9 SGPDTIRILITTDNHVGYNENDPIRGDDSWKTFEEITSIAKEKDVDMILQGGDLFHINKP 68
Query: 340 SVNCMFKCTEIIRKYCLGDKPVSIELLSD 426
S M+K + +R CLGD+P +ELL D
Sbjct: 69 SKKSMYKVIKSLRTNCLGDRPCELELLGD 97
>UniRef50_Q6CEM3 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 701
Score = 149 bits (362), Expect = 7e-35
Identities = 61/136 (44%), Positives = 92/136 (67%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVL 631
+NYEDPN+N+S P+ +I GNHDD G + D+L+ TGL+N+FG+ T + ++P+L
Sbjct: 104 LNYEDPNINVSVPVFAISGNHDDSGGDAMLCPNDVLAATGLINHFGRVTQNDQITVTPLL 163
Query: 632 LQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSNYI 811
+KG T LALYGL++++D+RL R FA VE RP + WF+L +HQN A ++Y+
Sbjct: 164 FRKGSTNLALYGLANVRDERLFRTFASGNVEFLRPQDDQAWFSLLAVHQNRASHTETSYL 223
Query: 812 PEGVLXNFLDLVVWGH 859
P L FL++++WGH
Sbjct: 224 PGNFLPQFLNMIIWGH 239
Score = 91.5 bits (217), Expect = 3e-17
Identities = 41/86 (47%), Positives = 58/86 (67%)
Frame = +1
Query: 169 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 348
DT+RILI +D H+G+ E DP+RG+DS+ F E++ LA DVD++L GDLF KPS
Sbjct: 7 DTIRILITTDNHVGYNEQDPIRGDDSWKTFHEIMGLARTEDVDMVLQAGDLFHINKPSRK 66
Query: 349 CMFKCTEIIRKYCLGDKPVSIELLSD 426
M++ +R C G++P +ELLSD
Sbjct: 67 SMYQVIRSLRMNCYGERPCELELLSD 92
>UniRef50_A5DLP0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 641
Score = 149 bits (362), Expect = 7e-35
Identities = 66/137 (48%), Positives = 89/137 (64%), Gaps = 1/137 (0%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVL 631
VNYED N NI P+ +I GNHDD G + LDIL+ +GLVNYFGK + + ++P+L
Sbjct: 109 VNYEDENFNIGVPVFAISGNHDDATGDSLLLPLDILAASGLVNYFGKVVNNEDITVAPLL 168
Query: 632 LQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMER-PDETLDWFNLFVLHQNHADRGHSNY 808
+KG T+LALYG+ ++KD+RL R+F + K R DE WFN +HQNH ++Y
Sbjct: 169 FKKGTTKLALYGIGNVKDERLHRVFRDNKATFLRSSDEPDSWFNFLCVHQNHVAHTRTSY 228
Query: 809 IPEGVLXNFLDLVVWGH 859
IPE L F+D V+WGH
Sbjct: 229 IPENFLPKFMDFVLWGH 245
Score = 93.9 bits (223), Expect = 5e-18
Identities = 40/86 (46%), Positives = 61/86 (70%)
Frame = +1
Query: 169 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 348
+T+ ILI +D H+G+ ENDP+RG+DS FEE+ +A + DVD+++ GGDLF KPS
Sbjct: 12 NTISILITTDNHVGYHENDPIRGDDSGKTFEEITRIAKERDVDMVVQGGDLFHVNKPSKK 71
Query: 349 CMFKCTEIIRKYCLGDKPVSIELLSD 426
+++ + +R CLGD+P +EL+SD
Sbjct: 72 SLYQVIKSLRSNCLGDRPCELELISD 97
>UniRef50_Q9UVN9 Cluster: Double-strand break repair protein MRE11;
n=2; Fungi/Metazoa group|Rep: Double-strand break repair
protein MRE11 - Coprinus cinereus (Inky cap fungus)
(Hormographiella aspergillata)
Length = 731
Score = 149 bits (360), Expect = 1e-34
Identities = 67/147 (45%), Positives = 96/147 (65%), Gaps = 11/147 (7%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVG---QGSVSSLDILSITGLVNYFGKW--------T 598
+NYEDPN NIS P+ SIHGNHDDP G G++ +LD+LS++GL+NY GK+
Sbjct: 120 INYEDPNFNISIPVFSIHGNHDDPQGPGVNGALCALDVLSVSGLLNYMGKFDLPTSDADA 179
Query: 599 DYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQ 778
T + + PVLL+KG T+L +YG+ ++KDQR+ +V M P + +WFN+ ++HQ
Sbjct: 180 ATTGIAVRPVLLRKGSTKLGMYGVGNVKDQRMHFELRSNRVRMYMPKDKDEWFNILLVHQ 239
Query: 779 NHADRGHSNYIPEGVLXNFLDLVVWGH 859
N G Y+PEG+ + +DLVVWGH
Sbjct: 240 NRVKHGPQEYVPEGMFDDSVDLVVWGH 266
Score = 116 bits (278), Expect = 1e-24
Identities = 48/94 (51%), Positives = 72/94 (76%)
Frame = +1
Query: 145 DISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 324
+I P+DT++IL+A+D H+G++E DP+RG+DS F E+L LAV+ +VD ILL GDLF
Sbjct: 13 NIETADPEDTIKILLATDNHIGYLERDPIRGQDSINTFREILQLAVKNEVDFILLAGDLF 72
Query: 325 DQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSD 426
+ KPS +C+++ ++R+Y LGDKP+ +ELLSD
Sbjct: 73 HENKPSRDCLYQTLALLREYTLGDKPIQVELLSD 106
>UniRef50_P32829 Cluster: Double-strand break repair protein MRE11;
n=9; Saccharomycetales|Rep: Double-strand break repair
protein MRE11 - Saccharomyces cerevisiae (Baker's yeast)
Length = 692
Score = 148 bits (358), Expect = 2e-34
Identities = 66/137 (48%), Positives = 91/137 (66%), Gaps = 1/137 (0%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVL 631
VNYEDPN NIS P+ I GNHDD G + +DIL TGL+N+FGK + +++ P+L
Sbjct: 105 VNYEDPNFNISIPVFGISGNHDDASGDSLLCPMDILHATGLINHFGKVIESDKIKVVPLL 164
Query: 632 LQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPD-ETLDWFNLFVLHQNHADRGHSNY 808
QKG T+LALYGL+ ++D+RL R F + V E P +WFNL +HQNH ++ +
Sbjct: 165 FQKGSTKLALYGLAAVRDERLFRTFKDGGVTFEVPTMREGEWFNLMCVHQNHTGHTNTAF 224
Query: 809 IPEGVLXNFLDLVVWGH 859
+PE L +FLD+V+WGH
Sbjct: 225 LPEQFLPDFLDMVIWGH 241
Score = 94.7 bits (225), Expect = 3e-18
Identities = 44/94 (46%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Frame = +1
Query: 163 PD-DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 339
PD DT+RILI +D H+G+ ENDP+ G+DS+ F EV+ LA +VD+++ GDLF KP
Sbjct: 4 PDPDTIRILITTDNHVGYNENDPITGDDSWKTFHEVMMLAKNNNVDMVVQSGDLFHVNKP 63
Query: 340 SVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNF 441
S +++ + +R C+GDKP +ELLSD + F
Sbjct: 64 SKKSLYQVLKTLRLCCMGDKPCELELLSDPSQVF 97
>UniRef50_UPI00015B5FB6 Cluster: PREDICTED: similar to
endo/exonuclease Mre11; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to endo/exonuclease Mre11 - Nasonia
vitripennis
Length = 450
Score = 144 bits (349), Expect = 3e-33
Identities = 66/137 (48%), Positives = 94/137 (68%), Gaps = 2/137 (1%)
Frame = +2
Query: 455 NYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLL 634
N++DP LNI PI +IHG+ D P+ G V +LD+L+ TGL+NYFGKW D + I PVLL
Sbjct: 123 NFKDPKLNIGMPIFAIHGHRDAPLF-GPVGALDLLAATGLINYFGKWPDKDKISIPPVLL 181
Query: 635 QKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSN--Y 808
+KG+T LALYGL+H+ D +L++ K+E+ + + D N+ VLHQN RG + Y
Sbjct: 182 RKGITTLALYGLNHMNDHKLTKCIKRDKLELLQEETIPDLCNVLVLHQNRQRRGRAENMY 241
Query: 809 IPEGVLXNFLDLVVWGH 859
+ E ++ +FL+LVVWGH
Sbjct: 242 VSESLIPDFLNLVVWGH 258
Score = 83.8 bits (198), Expect = 5e-15
Identities = 38/87 (43%), Positives = 59/87 (67%)
Frame = +1
Query: 166 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 345
++ +++L+A+DI+LG+ E R +DSF FEE+L A +VD IL G+LF +A P +
Sbjct: 24 ENIIQVLVAADINLGY-EQTVKREDDSFRTFEEILIYARDYEVDAILFAGNLFYEANPPL 82
Query: 346 NCMFKCTEIIRKYCLGDKPVSIELLSD 426
N + +C ++RKYCL DKP I+ L+D
Sbjct: 83 NVITRCISLLRKYCLSDKPAKIDCLTD 109
>UniRef50_Q23255 Cluster: Double-strand break repair protein mre-11;
n=2; Caenorhabditis|Rep: Double-strand break repair
protein mre-11 - Caenorhabditis elegans
Length = 728
Score = 143 bits (347), Expect = 4e-33
Identities = 69/141 (48%), Positives = 92/141 (65%), Gaps = 5/141 (3%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVL 631
VNY D NLN+ PI +IHGNHDD G+G +++LD+L +GLVN FGK ++ +SP+L
Sbjct: 162 VNYYDQNLNVGLPIFTIHGNHDDLSGKG-LTALDLLHESGLVNLFGKHSNIQEFIVSPIL 220
Query: 632 LQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDE-TLDWFNLFVLHQNH----ADRG 796
L+KG TRLALYG+ +D RL R F + RP+ DWFNLFVLHQN R
Sbjct: 221 LRKGETRLALYGIGSQRDDRLVRAFKNNSISFLRPNAGAEDWFNLFVLHQNRPRRAMHRS 280
Query: 797 HSNYIPEGVLXNFLDLVVWGH 859
N++PE ++ F DL++WGH
Sbjct: 281 TGNFLPESLIPQFFDLLIWGH 301
Score = 90.2 bits (214), Expect = 6e-17
Identities = 41/93 (44%), Positives = 61/93 (65%)
Frame = +1
Query: 166 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 345
+D ++IL+A+DIH G+ EN D+ FEEVL +A + VD+ILLGGDLF + PS
Sbjct: 63 EDIIKILVATDIHCGYGENKANIHMDAVNTFEEVLQIATEQKVDMILLGGDLFHENNPSR 122
Query: 346 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFS 444
+ T+++R+YCL P+++E LSD NF+
Sbjct: 123 EVQHRVTQLLRQYCLNGNPIALEFLSDASVNFN 155
>UniRef50_Q9XGM2 Cluster: Double-strand break repair protein MRE11;
n=14; Magnoliophyta|Rep: Double-strand break repair
protein MRE11 - Arabidopsis thaliana (Mouse-ear cress)
Length = 720
Score = 143 bits (346), Expect = 6e-33
Identities = 68/146 (46%), Positives = 93/146 (63%), Gaps = 10/146 (6%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKW----TDYTHVRI 619
VNYEDP+ N+ P+ SIHGNHDDP G ++S++DILS LVNYFGK + + +
Sbjct: 105 VNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAIDILSACNLVNYFGKMVLGGSGVGQITL 164
Query: 620 SPVLLQKGLTRLALYGLSHLKDQRLSRLF-AEKKVEMERPD-----ETLDWFNLFVLHQN 781
P+L++KG T +ALYGL +++D+RL+R+F V+ RP+ + DWFN+ VLHQN
Sbjct: 165 YPILMKKGSTTVALYGLGNIRDERLNRMFQTPHAVQWMRPEVQEGCDVSDWFNILVLHQN 224
Query: 782 HADRGHSNYIPEGVLXNFLDLVVWGH 859
N I E L FLD +VWGH
Sbjct: 225 RVKSNPKNAISEHFLPRFLDFIVWGH 250
Score = 113 bits (271), Expect = 7e-24
Identities = 50/91 (54%), Positives = 67/91 (73%)
Frame = +1
Query: 169 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 348
DTLR+L+A+D HLG+ME D +R DSF AFEE+ S+A + VD +LLGGDLF + KPS
Sbjct: 8 DTLRVLVATDCHLGYMEKDEIRRHDSFKAFEEICSIAEEKQVDFLLLGGDLFHENKPSRT 67
Query: 349 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNF 441
+ K EI+R++CL DKPV +++SDQ NF
Sbjct: 68 TLVKAIEILRRHCLNDKPVQFQVVSDQTVNF 98
>UniRef50_Q016A4 Cluster: Mre11 protein; n=3; Ostreococcus|Rep: Mre11
protein - Ostreococcus tauri
Length = 1229
Score = 141 bits (341), Expect = 2e-32
Identities = 71/147 (48%), Positives = 99/147 (67%), Gaps = 11/147 (7%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWT----DYTHVRI 619
VNYEDP+ N+ P+ SIHGNHDDP G+ ++S++D+L+ G+VNYFGK +V +
Sbjct: 584 VNYEDPHTNVELPVFSIHGNHDDPAGERNLSAMDVLASAGVVNYFGKHALAGGGTGNVDL 643
Query: 620 SPVLLQKGLTRLALYGLSHLKDQRLSRLFAEKK-VEMERPDETLD-----WFNLFVLHQN 781
PVLL+KG T++ALYGL +++D RL ++F+ K V RP ET D WFN+ ++HQN
Sbjct: 644 KPVLLRKGTTKVALYGLGYIRDNRLHQMFSVKGCVRWHRPAETEDCSSSSWFNVMLIHQN 703
Query: 782 HADRGHS-NYIPEGVLXNFLDLVVWGH 859
A HS N I E L ++LD V+WGH
Sbjct: 704 RA--AHSKNAISERYLPSWLDFVIWGH 728
Score = 90.6 bits (215), Expect = 4e-17
Identities = 43/94 (45%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Frame = +1
Query: 163 PD-DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 339
PD +TLR+L+A+D HLGF E D VR +D+F AFEE+ A + D + + GD+FD KP
Sbjct: 473 PDPNTLRVLVATDTHLGFAERDAVRKDDAFAAFEEIFRHAREQKCDCVFMAGDVFDVNKP 532
Query: 340 SVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNF 441
S + +C +++R+ GD V IE+LSD +NF
Sbjct: 533 SRETLVRCMDVLREATRGDGAVRIEVLSDTKENF 566
>UniRef50_Q6ZBS2 Cluster: Putative DNA repair and meiosis protein
Mre11; n=2; Oryza sativa|Rep: Putative DNA repair and
meiosis protein Mre11 - Oryza sativa subsp. japonica
(Rice)
Length = 615
Score = 140 bits (338), Expect = 5e-32
Identities = 64/141 (45%), Positives = 89/141 (63%), Gaps = 5/141 (3%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGK----WTDYTHVRI 619
VN+EDPN NI P+ ++HG HD P G +S+ DILS VNYFGK +D + +
Sbjct: 111 VNFEDPNFNIGLPVFTVHGTHDGPAGVDGLSATDILSACNFVNYFGKVDPGSSDVDQISV 170
Query: 620 SPVLLQKGLTRLALYGLSHLKDQRLSRLF-AEKKVEMERPDETLDWFNLFVLHQNHADRG 796
PV ++KG T +ALYGL +++D++LSR+ K++ + D DWFNLFV HQ
Sbjct: 171 CPVFIKKGATSVALYGLGNIRDEKLSRMLQTHYKIQWMKADSEDDWFNLFVFHQKRRKGS 230
Query: 797 HSNYIPEGVLXNFLDLVVWGH 859
+N I E +L +FLDLV+WGH
Sbjct: 231 STNGINEQLLPSFLDLVIWGH 251
Score = 101 bits (241), Expect = 3e-20
Identities = 48/95 (50%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
Frame = +1
Query: 151 SAWSPDDT--LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 324
++W ++ LRIL+A+D HLG++E D +R DSF FEE+ SLAV VD ILLGG+LF
Sbjct: 6 ASWDEEENSMLRILVATDCHLGYLEKDEIRRFDSFDTFEEICSLAVINKVDFILLGGNLF 65
Query: 325 DQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQ 429
+ KPS++ + K EIIR YCL D V +++SDQ
Sbjct: 66 HENKPSISTLVKSMEIIRSYCLNDHQVQFQVVSDQ 100
>UniRef50_A4HFW3 Cluster: Endo/exonuclease Mre11, putative; n=5;
Trypanosomatidae|Rep: Endo/exonuclease Mre11, putative -
Leishmania braziliensis
Length = 863
Score = 139 bits (336), Expect = 1e-31
Identities = 68/140 (48%), Positives = 96/140 (68%), Gaps = 5/140 (3%)
Frame = +2
Query: 455 NYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLL 634
N++DPN+N++ P+ +IHGNHDDPVG SSLD+L+ G +NYFG T + + PVLL
Sbjct: 104 NFQDPNINVALPVFAIHGNHDDPVG--GTSSLDLLATNGYLNYFGHVTSLDDIILEPVLL 161
Query: 635 QKGLTRLALYGLSHLKDQRLSRLFAEKKVEM--ERPDETLDWFNLFVLHQNHADRGHSNY 808
+KG T +ALYGL +++D+RL R F KKV++ +P WFN+ VLHQN RG ++
Sbjct: 162 RKGSTFIALYGLGNVRDERLHRCFRLKKVQLVYPKPVPGRKWFNILVLHQNRGVRGLASK 221
Query: 809 --IPEGVLXNF-LDLVVWGH 859
I EG+L F +DLV+WG+
Sbjct: 222 GGIMEGMLAGFGIDLVIWGN 241
Score = 98.7 bits (235), Expect = 2e-19
Identities = 47/91 (51%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = +1
Query: 172 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA-VQCDVDLILLGGDLFDQAKPSVN 348
T + L+ +D HLGF E DP RG+DSF FEEVL A + DVD +LLGGDLF + KPS+
Sbjct: 5 TFKFLLTTDNHLGFAERDPRRGDDSFTTFEEVLRAARTEHDVDAMLLGGDLFHENKPSLG 64
Query: 349 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNF 441
C+ + + RKY G+K V LLSD NF
Sbjct: 65 CLVRACSLFRKYVFGNKTVPFSLLSDAATNF 95
>UniRef50_Q5KHA6 Cluster: Meiotic DNA double-strand break
processing-related protein, putative; n=3; Fungi/Metazoa
group|Rep: Meiotic DNA double-strand break
processing-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 721
Score = 138 bits (335), Expect = 1e-31
Identities = 67/153 (43%), Positives = 97/153 (63%), Gaps = 17/153 (11%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVG---QGSVSSLDILSITGLVNYFGKW--------- 595
VNYEDPN+NI+ P+ SIHGNHDDP G +G++ +LD+LS++G++NYFGK
Sbjct: 130 VNYEDPNINIAIPVFSIHGNHDDPQGTGPEGALCALDVLSVSGVLNYFGKSDLVADESAA 189
Query: 596 -TDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPD----ETLDWFN 760
++I PVLL+KG T +ALYG +++DQR+ + KV+M P DWFN
Sbjct: 190 DNPEKGIQIRPVLLRKGTTHVALYGCGNIRDQRMYQELRANKVKMFMPTGGNVPDSDWFN 249
Query: 761 LFVLHQNHADRGHSNYIPEGVLXNFLDLVVWGH 859
+ ++HQN G NY+PE + + + LV+WGH
Sbjct: 250 ILLVHQNRVRHGPQNYVPENMFDDSMRLVIWGH 282
Score = 102 bits (245), Expect = 1e-20
Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Frame = +1
Query: 139 ENDISAWSPD--DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG 312
E +S PD + RILIA+D H+G+ E DPVRG+DS F E+L LA DVD ILL
Sbjct: 19 EPPLSIVEPDLENCFRILIATDNHIGYAEKDPVRGQDSINTFREILELARDHDVDFILLA 78
Query: 313 GDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSD 426
GDLF + +PS CM + ++R++ LGDKP+ ELLSD
Sbjct: 79 GDLFHENRPSRTCMHQTIALLREFTLGDKPIEFELLSD 116
>UniRef50_Q8SRV0 Cluster: DOUBLE-STRAND BREAK DNA REPAIR PROTEIN;
n=1; Encephalitozoon cuniculi|Rep: DOUBLE-STRAND BREAK
DNA REPAIR PROTEIN - Encephalitozoon cuniculi
Length = 567
Score = 136 bits (328), Expect = 9e-31
Identities = 60/136 (44%), Positives = 88/136 (64%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVL 631
+N+ D N+ IS P++SIHGNHDDP G VS +DIL GLVNY GK+ + + P+L
Sbjct: 85 LNFHDQNIGISIPVVSIHGNHDDPSGISMVSPIDILQSAGLVNYIGKYNLIDRIDVYPLL 144
Query: 632 LQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSNYI 811
L+K R+A+YGL H+KD+RL R+F E ++ RP++ W+N+ +LHQN R +
Sbjct: 145 LEKEY-RVAIYGLGHIKDRRLYRMFCEGRIVFHRPEDYDSWYNVLILHQNRIPR-EKEHF 202
Query: 812 PEGVLXNFLDLVVWGH 859
++ F DL+V+GH
Sbjct: 203 SSDLVEGFFDLIVYGH 218
Score = 81.4 bits (192), Expect = 3e-14
Identities = 35/75 (46%), Positives = 55/75 (73%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 354
++ILI SD HLG+ E+DPV +DS+ FEE+L +A + VDL+L GGDLF + +PS +C+
Sbjct: 1 MKILITSDNHLGYRESDPVLLDDSYDTFEEILGIAQRERVDLVLQGGDLFHENRPSRSCL 60
Query: 355 FKCTEIIRKYCLGDK 399
+ + R+YC+G++
Sbjct: 61 NRTIGLFRRYCIGNE 75
>UniRef50_Q4P5A9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 883
Score = 134 bits (323), Expect = 4e-30
Identities = 71/161 (44%), Positives = 95/161 (59%), Gaps = 25/161 (15%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVG---QGSVSSLDILSITGLVNYFGKWT-------- 598
+NYEDPNLN++ P+ SIHGNHDDP G G++S+LD+LS++GL+NYFGK
Sbjct: 208 INYEDPNLNVAIPVFSIHGNHDDPQGVGETGALSALDLLSVSGLINYFGKIELPSDDAAA 267
Query: 599 -------------DYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPD 739
+RI PVLLQKG TRLALYG+ ++KD+R+ +V M RP
Sbjct: 268 GAPAARTARGGAFQEKGIRIKPVLLQKGETRLALYGMGNIKDERMHFELRANRVRMYRPQ 327
Query: 740 ETLD-WFNLFVLHQNHADRGHSNYIPEGVLXNFLDLVVWGH 859
E D WFN+ +HQN +PE + + + LVVWGH
Sbjct: 328 EEPDSWFNILCVHQNRVAHNPKACVPETMFDDSVHLVVWGH 368
Score = 119 bits (287), Expect = 8e-26
Identities = 54/92 (58%), Positives = 73/92 (79%)
Frame = +1
Query: 151 SAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 330
+A S DD ++I++A+D H+G+ME DPVRG+DS FEE+L LAVQ DVDLILLGGDLF +
Sbjct: 103 AAQSEDDHIKIMLATDNHIGYMERDPVRGQDSIRTFEEILQLAVQHDVDLILLGGDLFHE 162
Query: 331 AKPSVNCMFKCTEIIRKYCLGDKPVSIELLSD 426
KPS + + + ++R+Y LGDKP+S+ELLSD
Sbjct: 163 NKPSRDTLHQTMALLRQYTLGDKPISVELLSD 194
>UniRef50_Q586P4 Cluster: Endo/exonuclease Mre11; n=3; Trypanosoma
brucei|Rep: Endo/exonuclease Mre11 - Trypanosoma brucei
Length = 763
Score = 130 bits (314), Expect = 4e-29
Identities = 66/141 (46%), Positives = 89/141 (63%), Gaps = 6/141 (4%)
Frame = +2
Query: 455 NYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLL 634
N++DPN+N++ PI IHGNHDDPVG SS+DILS GLVNYFG + + + PVLL
Sbjct: 136 NFQDPNINVALPIFMIHGNHDDPVG--GTSSIDILSTAGLVNYFGHTSSLDDIVVEPVLL 193
Query: 635 QKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERP--DETLDWFNLFVLHQNHADRGHSNY 808
+KG T +ALYGL +++D RL R F KK+ +P + DWF + + HQN R N
Sbjct: 194 KKGDTYIALYGLGNVRDDRLHRCFRMKKLHFVQPKTEPGKDWFKILLFHQNRGVRSGGNM 253
Query: 809 ---IPEGVLXNF-LDLVVWGH 859
I E +L +DLV+WG+
Sbjct: 254 KCGIYETMLAGHGMDLVIWGN 274
Score = 96.7 bits (230), Expect = 7e-19
Identities = 45/91 (49%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Frame = +1
Query: 172 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA-VQCDVDLILLGGDLFDQAKPSVN 348
T + L+ SD HLG+ E D RG+DSF FEE L A ++ +VD ILL GD F KPS+
Sbjct: 37 TFKFLVTSDNHLGYQERDSRRGDDSFTTFEECLRAARLEHEVDAILLAGDFFHDNKPSLG 96
Query: 349 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNF 441
C+ + + ++R Y LGDKP+S LLSD +NF
Sbjct: 97 CLARTSSLLRSYVLGDKPISFTLLSDPKRNF 127
>UniRef50_A3FQD2 Cluster: DNA repair and meiosis protein Mre11; n=2;
Cryptosporidium|Rep: DNA repair and meiosis protein
Mre11 - Cryptosporidium parvum Iowa II
Length = 513
Score = 127 bits (307), Expect = 3e-28
Identities = 60/143 (41%), Positives = 88/143 (61%), Gaps = 8/143 (5%)
Frame = +2
Query: 455 NYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLL 634
N+E + N+S P IHGNHDDP +G +S LDIL +NY GK + ++ + PVLL
Sbjct: 35 NWEVGDANVSIPFFGIHGNHDDPGEEGLLSPLDILESARFINYIGKNNNVDNIEVFPVLL 94
Query: 635 QKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDET---LDWFNLFVLHQNHADRG--- 796
+KG TRLA+YG+ +++D+RL R F + KV+ P+ T +WF++ + HQN
Sbjct: 95 EKGSTRLAIYGIGNIRDERLHRSFEKNKVKFLIPENTNGDSEWFSILLFHQNRKKGNFGG 154
Query: 797 --HSNYIPEGVLXNFLDLVVWGH 859
+ IPE L +FLDL++WGH
Sbjct: 155 TLSKDSIPESFLPDFLDLIIWGH 177
>UniRef50_A5YZR9 Cluster: MRE11B; n=2; Magnoliophyta|Rep: MRE11B -
Zea mays (Maize)
Length = 672
Score = 117 bits (281), Expect = 4e-25
Identities = 62/146 (42%), Positives = 86/146 (58%), Gaps = 10/146 (6%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGK----WTDYTHVRI 619
VNYEDPN I P+ +IHG+ D P G ++S DIL+ +NYFGK T V +
Sbjct: 180 VNYEDPNYKIGLPVFTIHGDQDYPTGTDNLSVNDILTAGNFLNYFGKTDLGCTGVGKVTV 239
Query: 620 SPVLLQKGLTRLALYGLSHLKDQRLSRLFAE----KKVEMERPDET--LDWFNLFVLHQN 781
PV+++KG T +A+YGL ++KD RL R+ E ++ E DET DWFN+ VLHQ
Sbjct: 240 YPVVIRKGETYIAMYGLGNIKDGRLKRMLHEPGAVNWMQPEFQDETPSSDWFNILVLHQK 299
Query: 782 HADRGHSNYIPEGVLXNFLDLVVWGH 859
+ I E +L F+D+V+WGH
Sbjct: 300 RTRGSPGDAISELLLPRFVDMVIWGH 325
Score = 101 bits (241), Expect = 3e-20
Identities = 45/87 (51%), Positives = 65/87 (74%)
Frame = +1
Query: 169 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 348
++LR+L+A+D HLG++E D VRG DSF FEE+ SLAV+ VD +LL G+LF + KPS +
Sbjct: 83 NSLRVLVATDCHLGYLEKDEVRGFDSFDTFEEICSLAVKNKVDFLLLCGNLFHENKPSNS 142
Query: 349 CMFKCTEIIRKYCLGDKPVSIELLSDQ 429
+ K EI+R+YC+ D PV +++SDQ
Sbjct: 143 TLVKAIEILRRYCMNDCPVQFQVISDQ 169
>UniRef50_Q86C23 Cluster: Mre11; n=2; Entamoeba histolytica|Rep:
Mre11 - Entamoeba histolytica
Length = 603
Score = 113 bits (271), Expect = 7e-24
Identities = 59/139 (42%), Positives = 86/139 (61%), Gaps = 9/139 (6%)
Frame = +2
Query: 470 NLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKW---------TDYTHVRIS 622
N I YP+ IHGNHD P G V+ LDIL GLVN+ GK TD T + +S
Sbjct: 104 NQGIKYPMYVIHGNHDIPSGIEHVAGLDILQTAGLVNFIGKAEDISEIDNKTDQTILHLS 163
Query: 623 PVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHS 802
P+LLQKG TR+ALYG+S+ K++ ++RL+A +V+++ PD D F + ++HQ+ R
Sbjct: 164 PILLQKGTTRIALYGMSYKKNEEMNRLWASSQVQIDEPDG--DVFKILLIHQDRILRNTL 221
Query: 803 NYIPEGVLXNFLDLVVWGH 859
PE +L + +L+V+GH
Sbjct: 222 TTFPEELLKDRFNLIVFGH 240
Score = 76.2 bits (179), Expect = 1e-12
Identities = 39/78 (50%), Positives = 49/78 (62%)
Frame = +1
Query: 169 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 348
+T +ILI SD HLG E +D ++AFEE+L A Q DVDLIL GD FD PS
Sbjct: 6 NTFKILICSDTHLGAGEKSHCLKDDCYLAFEEILQQANQEDVDLILHSGDFFDDQNPSKY 65
Query: 349 CMFKCTEIIRKYCLGDKP 402
C+ K E++RKY +G KP
Sbjct: 66 CLTKTMELMRKYLMG-KP 82
>UniRef50_Q4U965 Cluster: Double-strand break repair protein,
putative; n=2; Theileria|Rep: Double-strand break repair
protein, putative - Theileria annulata
Length = 870
Score = 111 bits (267), Expect = 2e-23
Identities = 51/127 (40%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Frame = +2
Query: 488 PILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYG 667
P IHGNHD+P Q S+S +DIL + GLV YFG+ D +V I P+ + KG ++ALYG
Sbjct: 394 PFFVIHGNHDNPTYQHSLSPIDILDVAGLVTYFGRVFDLENVVIKPIKISKGDVKIALYG 453
Query: 668 LSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSN---YIPEGVLXNFL 838
L +KD+RL +F + V+ E+ +E ++ + ++HQN R N Y+ ++ +
Sbjct: 454 LGWIKDERLVEMFNKNMVKFEQCEEFDKYYKILMIHQNRYPRRGINDHDYVTTNMIPEWF 513
Query: 839 DLVVWGH 859
DLV+WGH
Sbjct: 514 DLVIWGH 520
Score = 71.3 bits (167), Expect = 3e-11
Identities = 41/103 (39%), Positives = 58/103 (56%)
Frame = +1
Query: 115 SCTSKIMIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 294
S SK D+ D+ ++IL+ +D HLG+ E+DP RG DS FEE+L +A +V
Sbjct: 244 SDVSKEFEFKDLDESEDDNVVKILVFTDTHLGYKEDDPFRGNDSLNTFEELLFIAKHLEV 303
Query: 295 DLILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLS 423
D IL GDLFD+ PS M+ II G + +++LLS
Sbjct: 304 DFILHSGDLFDKNMPSRTTMYLL--IINSLMNGIRYRTMDLLS 344
>UniRef50_A5K9T7 Cluster: DNA repair exonuclease, putative; n=1;
Plasmodium vivax|Rep: DNA repair exonuclease, putative -
Plasmodium vivax
Length = 1119
Score = 109 bits (261), Expect = 1e-22
Identities = 55/129 (42%), Positives = 77/129 (59%), Gaps = 5/129 (3%)
Frame = +2
Query: 488 PILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYG 667
P+ ++HGNHD P +S LDIL + L+NY GK + + I PVLL K T++A+Y
Sbjct: 549 PLFTMHGNHDYPYSCDYISPLDILHVGNLINYIGK-SSLDRIVIKPVLLNKEETKIAIYA 607
Query: 668 LSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQN-HADRGH----SNYIPEGVLXN 832
+ +KD+RL R F EKKV+ P + N+ VLHQN H H N+I E + +
Sbjct: 608 IGWIKDERLHRAFEEKKVKFMLPSDHACRINVLVLHQNRHMRCAHGNDFKNFIKESFIPS 667
Query: 833 FLDLVVWGH 859
F+DLV+WGH
Sbjct: 668 FVDLVIWGH 676
Score = 79.4 bits (187), Expect = 1e-13
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +1
Query: 136 IENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGG 315
I +S PD TL+IL+ +D HLG+ EN+ V+ ED+F +FEE+L +A +VDLIL G
Sbjct: 295 IRKSLSKNEPD-TLKILLCTDNHLGYKENNAVQKEDTFNSFEEILFVAKHLNVDLILNSG 353
Query: 316 DLFDQAKPSVNCMFKCTEIIRKYC 387
DLF + K S +FK IIR+YC
Sbjct: 354 DLFHKNKISEYTLFKSMAIIRRYC 377
>UniRef50_Q22G12 Cluster: Ser/Thr protein phosphatase family
protein; n=1; Tetrahymena thermophila SB210|Rep: Ser/Thr
protein phosphatase family protein - Tetrahymena
thermophila SB210
Length = 884
Score = 108 bits (260), Expect = 2e-22
Identities = 51/144 (35%), Positives = 88/144 (61%), Gaps = 8/144 (5%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVGQ-GSVSSLDILSITGLVNYFGKWTDYTHVRISPV 628
VN++D NLNI PI IHGNHD P + G++S +D+L T +N+FGK+++ ++++P+
Sbjct: 110 VNFQDCNLNIELPIFVIHGNHDYPSDEYGNLSVIDLLHATKYLNHFGKFSNIEQIKVTPI 169
Query: 629 LLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDET--LDWFNLFVLHQN-----HA 787
+ QKG T +ALYG+ +LKD+ ++ E K+E +P++ D N+ V+HQN
Sbjct: 170 IFQKGNTTVALYGIGYLKDKYFHKMLEEGKIEFVKPEQMGYKDTVNILVIHQNRYKGIRQ 229
Query: 788 DRGHSNYIPEGVLXNFLDLVVWGH 859
+ + N + ++D ++ GH
Sbjct: 230 GQSYRNCVHPEQFPEWIDFIIRGH 253
Score = 93.9 bits (223), Expect = 5e-18
Identities = 40/77 (51%), Positives = 55/77 (71%)
Frame = +1
Query: 166 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 345
++T +IL+A+D H+G+ ENDP+RG DSF AFEEVL +A VD +LLGGDLF + PS
Sbjct: 21 ENTFKILVATDNHVGYKENDPIRGNDSFEAFEEVLKIAKSEKVDFLLLGGDLFHETNPSQ 80
Query: 346 NCMFKCTEIIRKYCLGD 396
C++K ++ Y LGD
Sbjct: 81 QCLYKMLNLLGNYVLGD 97
>UniRef50_A7AP02 Cluster: DNA repair protein (Mre11) family protein;
n=1; Babesia bovis|Rep: DNA repair protein (Mre11)
family protein - Babesia bovis
Length = 1040
Score = 107 bits (256), Expect = 5e-22
Identities = 51/128 (39%), Positives = 78/128 (60%), Gaps = 4/128 (3%)
Frame = +2
Query: 488 PILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYG 667
P IHGNHD+P +S +D+L ++GLV +FG TD T V + P+ + KG LALYG
Sbjct: 322 PFFVIHGNHDNPTTMNGLSPIDLLDVSGLVTFFGTVTDMTKVEVHPICISKGDIHLALYG 381
Query: 668 LSHLKDQRLSRLFAEKKVEMERPDET-LDWFNLFVLHQN-HADRG--HSNYIPEGVLXNF 835
+ +K++ L + F E KV P T + ++ + + H+N + RG ++IPE L ++
Sbjct: 382 MGWVKEEFLYKAFEENKVVFVPPVNTGISYYKVLLFHENRYPRRGVKAKDFIPEEFLPDW 441
Query: 836 LDLVVWGH 859
LDLV+WGH
Sbjct: 442 LDLVIWGH 449
Score = 77.4 bits (182), Expect = 4e-13
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 354
LR +I +D HLG E DP+R DSF AF+EVL LA VD IL GDLFD + PS + +
Sbjct: 207 LRFMIFTDTHLGHKETDPIRENDSFNAFQEVLFLAKYLQVDGILHAGDLFDDSHPSRSVI 266
Query: 355 FKCTEIIRKYC 387
++ E++R+YC
Sbjct: 267 YRTMELLRRYC 277
>UniRef50_Q8I263 Cluster: DNA repair exonuclease, putative; n=1;
Plasmodium falciparum 3D7|Rep: DNA repair exonuclease,
putative - Plasmodium falciparum (isolate 3D7)
Length = 1118
Score = 102 bits (245), Expect = 1e-20
Identities = 50/129 (38%), Positives = 79/129 (61%), Gaps = 5/129 (3%)
Frame = +2
Query: 488 PILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYG 667
P +IHGNHD P +S LDIL+I+ L+NY GK + ++ + P+LL K +++++Y
Sbjct: 583 PFYTIHGNHDYPYSYEYISPLDILNISNLINYIGK-NNLNNIVVKPILLNKYKSKISIYA 641
Query: 668 LSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADR---GHS--NYIPEGVLXN 832
+ +KD+RL R F +V+ P + + N+ VLHQN R G++ N+I E +
Sbjct: 642 VGWMKDERLYRSFENNEVKFILPSDYKNRINILVLHQNRYIRNAYGNNTKNFIKESFIPK 701
Query: 833 FLDLVVWGH 859
F+DLV+WGH
Sbjct: 702 FIDLVIWGH 710
Score = 77.0 bits (181), Expect = 6e-13
Identities = 36/72 (50%), Positives = 52/72 (72%)
Frame = +1
Query: 172 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 351
TL+IL+ +D HLG+ EN+ ++ +DSF +FEE+L +A + +VD+IL GDLF + K S
Sbjct: 350 TLKILLCTDNHLGYKENNSIQKKDSFNSFEEILFIAKKLNVDMILNSGDLFHKNKVSEYT 409
Query: 352 MFKCTEIIRKYC 387
+FK IIRKYC
Sbjct: 410 LFKSMYIIRKYC 421
>UniRef50_Q7RBG7 Cluster: Rad32-related; n=6; Plasmodium
(Vinckeia)|Rep: Rad32-related - Plasmodium yoelii yoelii
Length = 1037
Score = 102 bits (244), Expect = 1e-20
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Frame = +2
Query: 482 SYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLAL 661
S P +IHGNHD P + LDIL+I+ L+NY GK + + I P+LL K T +++
Sbjct: 536 SIPFYTIHGNHDYPYSYDYICPLDILNISNLINYIGK-NNMEKLIIKPILLNKKGTHISI 594
Query: 662 YGLSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADR-----GHSNYIPEGVL 826
Y + +KD+RL F K ++ P++ + N+ +LHQN R NYI E +
Sbjct: 595 YAIGWIKDERLYNYFENKNIKFIIPEDYKNRINILLLHQNRYMRNTNSNNSKNYIKESFI 654
Query: 827 XNFLDLVVWGH 859
+F+DLV+WGH
Sbjct: 655 PSFIDLVIWGH 665
Score = 81.8 bits (193), Expect = 2e-14
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = +1
Query: 169 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 348
DTL+IL+ +D HLG+ EN+P++ +D+F FEE+L +A + +VD+IL GDLF + K S
Sbjct: 303 DTLKILLCTDNHLGYKENNPIQKKDTFNTFEEILFIAKKLNVDMILNSGDLFHKNKVSEY 362
Query: 349 CMFKCTEIIRKYC 387
+FK IIRKYC
Sbjct: 363 TLFKTMSIIRKYC 375
>UniRef50_A0DUM4 Cluster: Chromosome undetermined scaffold_64, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_64,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1041
Score = 99.5 bits (237), Expect = 9e-20
Identities = 55/142 (38%), Positives = 84/142 (59%), Gaps = 7/142 (4%)
Frame = +2
Query: 455 NYEDPNLNISYPILSIHGNHDDPVGQG--SVSSLDILSITGLVNYFGKWTDYTHVRISPV 628
N+ N N+ PI I+GNHDD V + SVS LDIL + +NY GK TD ++V I P+
Sbjct: 474 NFSCSNFNVQLPIFIINGNHDDIVTERNESVSILDILHESKYLNYIGKITDQSNVCIKPI 533
Query: 629 LLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGH--- 799
+L K ++ALYGL ++KD +L ++ E K+ ++ DE + FN+ ++HQN H
Sbjct: 534 VLVKNNQKIALYGLGYMKDYQLHKIINEGKLVLDSLDE--NNFNILIIHQNKYKGNHFQD 591
Query: 800 -SNYIPEGVLXNF-LDLVVWGH 859
N+I + +DL++WGH
Sbjct: 592 ERNFIDPLYFKKYKIDLLIWGH 613
Score = 75.8 bits (178), Expect = 1e-12
Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Frame = +1
Query: 178 RILIASDIHLGFMEN---DPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 348
+ L+ASD HLG EN R +D+F AFEEVL +A Q +VD ++LGGDLF + P+ +
Sbjct: 382 KFLVASDNHLGANENVGPKSNRYQDAFDAFEEVLQIASQQNVDFVILGGDLFHEKHPTEH 441
Query: 349 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSXN 450
C+ KC +I++++ GD I++ + + N+ N
Sbjct: 442 CLLKCVDILQRHVFGDNFGGIQMEVNSL-NYQPN 474
>UniRef50_A2ECB0 Cluster: Ser/Thr protein phosphatase, putative;
n=1; Trichomonas vaginalis G3|Rep: Ser/Thr protein
phosphatase, putative - Trichomonas vaginalis G3
Length = 562
Score = 85.8 bits (203), Expect = 1e-15
Identities = 43/146 (29%), Positives = 80/146 (54%), Gaps = 11/146 (7%)
Frame = +2
Query: 455 NYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLL 634
N+ +PN+NI P +HGNHD P G GS S + +LS++ +N+F + + P++L
Sbjct: 99 NWLNPNINIKIPFFCMHGNHDAPNGLGSTSPIQLLSVSKYLNFFKPVDIKETIELQPIVL 158
Query: 635 QKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPD--ETLDWFNLFVLHQNHADRGH--- 799
++G R+ +YGL ++ +++ + KK+++ P+ E + + ++HQN + H
Sbjct: 159 KRGTIRVVVYGLGYIFEEKFKEVVMGKKLKLIAPEEGEFERTYTILMIHQNMSSYDHDIG 218
Query: 800 ------SNYIPEGVLXNFLDLVVWGH 859
S+ I + +DLV+WGH
Sbjct: 219 VMATRLSDAIWSETNPHNVDLVIWGH 244
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/78 (35%), Positives = 46/78 (58%)
Frame = +1
Query: 160 SPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 339
S DT +I I +D H+G+ E D + +DSF AF+E + A + D+IL GD F++ P
Sbjct: 4 SQQDTFKIAIFTDTHIGYDEQDAITEKDSFRAFKECVQNAHIQNADIILHAGDFFNERNP 63
Query: 340 SVNCMFKCTEIIRKYCLG 393
S + K +I+ ++ +G
Sbjct: 64 SRYAVIKTMKILDEFVIG 81
>UniRef50_UPI000049A054 Cluster: DNA repair protein rad32; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DNA repair protein
rad32 - Entamoeba histolytica HM-1:IMSS
Length = 550
Score = 72.5 bits (170), Expect = 1e-11
Identities = 35/135 (25%), Positives = 72/135 (53%)
Frame = +2
Query: 452 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVL 631
+N DP +N+ +P+ +IHG +D+P G ++ +IL+ GLVNY + + PV+
Sbjct: 93 LNITDPYINVKHPLFTIHGTNDEPSGYKLIAGSEILASCGLVNYISPKSFEEEKMLKPVI 152
Query: 632 LQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSNYI 811
+ T++ALYGLS L L + ++ +++P+ DW + +L + +G +
Sbjct: 153 IVNEHTKIALYGLSVLYSSDLDEIVEDETFHIKKPNGN-DWICILLL---YIGKGTISQT 208
Query: 812 PEGVLXNFLDLVVWG 856
+ ++ ++++ G
Sbjct: 209 TKDIIEKHFNIIILG 223
Score = 61.3 bits (142), Expect = 3e-08
Identities = 26/93 (27%), Positives = 50/93 (53%)
Frame = +1
Query: 172 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 351
++ + D HLG+ E + +D + FE+ L A Q + ++L GDLF+ +P+ +C
Sbjct: 2 SITFFVTGDNHLGYYEKNLTLKDDCYKLFEQYLKEATQKEGSILLQCGDLFNDLRPNKSC 61
Query: 352 MFKCTEIIRKYCLGDKPVSIELLSDQIKNFSXN 450
+ K +I+KYC+GD + + + ++ N
Sbjct: 62 VSKTANLIKKYCIGDADIPYTIKDEAELSYPLN 94
>UniRef50_Q8PUY5 Cluster: DNA double-strand break repair protein
mre11; n=2; Methanosarcina|Rep: DNA double-strand break
repair protein mre11 - Methanosarcina mazei
(Methanosarcina frisia)
Length = 617
Score = 53.6 bits (123), Expect = 6e-06
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +1
Query: 166 DDTLRILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 342
D +RIL +D HLG+ + + VR +D F AFE V+ AV VD ++ GDLFD P+
Sbjct: 2 DREIRILHTADTHLGYRQYHSEVRRQDFFKAFETVIKDAVDMQVDAVVHAGDLFDSRNPT 61
Query: 343 VNCMFKCTEIIRKYCLGDKP 402
+ + + ++ + + + P
Sbjct: 62 LEDLLETMNVLSRLKVANIP 81
>UniRef50_Q46FJ9 Cluster: DNA repair protein; n=1; Methanosarcina
barkeri str. Fusaro|Rep: DNA repair protein -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 776
Score = 53.2 bits (122), Expect = 8e-06
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 175 LRILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 351
+RIL +D HLG+ + + VR D F AFE V++ AV+ VD ++ GDLFD P++
Sbjct: 5 IRILHTADTHLGYRQYHSEVRRNDFFAAFELVVNDAVEMQVDAVVHAGDLFDSRNPTLED 64
Query: 352 MFKCTEIIRKYCLGDKP 402
+ + ++ + D P
Sbjct: 65 LLETINLLSRLKAADIP 81
>UniRef50_Q8U1N9 Cluster: DNA double-strand break repair protein
mre11; n=4; Thermococcaceae|Rep: DNA double-strand break
repair protein mre11 - Pyrococcus furiosus
Length = 426
Score = 50.4 bits (115), Expect = 6e-05
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +1
Query: 193 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTE 369
+DIHLG+ + + P R E+ AF+ L +AVQ +VD IL+ GDLF ++PS + K
Sbjct: 7 ADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIA 66
Query: 370 IIR 378
+++
Sbjct: 67 LLQ 69
>UniRef50_A4ENU6 Cluster: Putative ATP-dependent dsDNA exonuclease;
n=2; Rhodobacteraceae|Rep: Putative ATP-dependent dsDNA
exonuclease - Roseobacter sp. SK209-2-6
Length = 380
Score = 49.6 bits (113), Expect = 1e-04
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 354
+RIL +D+HLG N ED E++LS V DVD++++ GD+FD+A P + +
Sbjct: 1 MRILHTADLHLGRQFNGISLEEDHAAILEQILSAVVAHDVDVLIIAGDIFDRAAPPASAV 60
>UniRef50_A5YS39 Cluster: DNA double-strand break repair protein
mre11; n=1; uncultured haloarchaeon|Rep: DNA
double-strand break repair protein mre11 - uncultured
haloarchaeon
Length = 397
Score = 49.2 bits (112), Expect = 1e-04
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +1
Query: 172 TLRILIASDIHLGFMEND-PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 348
T IL SD HLG + + VR +D AF++ +S+A+Q DVD ++ GDLFD P++
Sbjct: 11 TTTILHISDTHLGNRQYEYDVRRDDFSDAFDQSVSIAIQEDVDAVIHTGDLFDTRDPTLP 70
Query: 349 CMFKCTEII 375
+ C +I+
Sbjct: 71 DINDCIDIL 79
>UniRef50_A2BM15 Cluster: Predicted DNA repair exonuclease; n=1;
Hyperthermus butylicus DSM 5456|Rep: Predicted DNA
repair exonuclease - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 407
Score = 47.2 bits (107), Expect = 5e-04
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGE-DSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 351
L +L SD HLG+ + + E D + FEEV+ +A++ VD ++ GDLFD +P
Sbjct: 11 LHLLHVSDTHLGYRQYGIIEREMDFYQVFEEVIDIAIREHVDAVIHTGDLFDSTRPPAQA 70
Query: 352 MFKCTEIIRK 381
+ ++K
Sbjct: 71 IRAAIRALKK 80
>UniRef50_A3HX94 Cluster: DNA repair exonuclease; n=1; Algoriphagus
sp. PR1|Rep: DNA repair exonuclease - Algoriphagus sp.
PR1
Length = 414
Score = 46.8 bits (106), Expect = 7e-04
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP---SV 345
++IL +D HLG + R E+ + EE++ +A Q +VDL+LL GD+FD P +V
Sbjct: 2 IKILHTADWHLGKRLQEFSRIEEQKLVLEEIIEVADQENVDLVLLAGDIFDTFNPNHEAV 61
Query: 346 NCMFKCTEIIRKYCLGDKPV 405
++K + K G++P+
Sbjct: 62 ELLYKTLRRLSKN--GERPI 79
>UniRef50_Q2JK75 Cluster: Ser/Thr protein phosphatase family
protein; n=4; Synechococcus|Rep: Ser/Thr protein
phosphatase family protein - Synechococcus sp. (strain
JA-2-3B'a(2-13)) (Cyanobacteria bacteriumYellowstone
B-Prime)
Length = 430
Score = 46.4 bits (105), Expect = 0.001
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Frame = +1
Query: 172 TLRILIASDIHLGFMEND-PVRGEDSFIAFEEVLS-LAVQCDVDLILLGGDLFD--QAKP 339
T L +D+HLG+ D P R +D F+AF +V+ A+Q VD +L+ GDLF+ Q +P
Sbjct: 5 TCTFLHLADVHLGYDRYDSPERSKDFFLAFRDVVRRYAIQDPVDFVLIAGDLFEHRQIQP 64
Query: 340 SV 345
V
Sbjct: 65 GV 66
>UniRef50_Q3ISN6 Cluster: Conserved DNA repair operon protein; n=1;
Natronomonas pharaonis DSM 2160|Rep: Conserved DNA
repair operon protein - Natronomonas pharaonis (strain
DSM 2160 / ATCC 35678)
Length = 451
Score = 46.4 bits (105), Expect = 0.001
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 178 RILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 354
R+L D H+G+ + + P R ED AF +V AV+ DVD ++ GDLF +P + +
Sbjct: 3 RVLHTGDTHIGYRQYHTPERREDFLSAFRQVADDAVEMDVDAVVHAGDLFHDRRPGLVDL 62
Query: 355 FKCTEII 375
+I+
Sbjct: 63 LGTVDIL 69
>UniRef50_Q12VW7 Cluster: Metallophosphoesterase; n=1;
Methanococcoides burtonii DSM 6242|Rep:
Metallophosphoesterase - Methanococcoides burtonii
(strain DSM 6242)
Length = 485
Score = 46.4 bits (105), Expect = 0.001
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 175 LRILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 351
+RIL D H+G+ + + VR +D AF V+ A+ VD+++ GDLFD P++
Sbjct: 5 IRILHTGDTHIGYRQYHSEVRRQDFIDAFSSVIDDAIDMKVDVVVHAGDLFDSRNPTLED 64
Query: 352 MFKCTEIIRK 381
+ +++ K
Sbjct: 65 ILDTIKVLLK 74
>UniRef50_O29231 Cluster: DNA double-strand break repair protein
mre11; n=1; Archaeoglobus fulgidus|Rep: DNA
double-strand break repair protein mre11 - Archaeoglobus
fulgidus
Length = 443
Score = 46.4 bits (105), Expect = 0.001
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +1
Query: 193 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTE 369
+D+HLG+ + N P R ED AF+ + AV+ + D +++ GDLF ++ PS + + E
Sbjct: 7 ADVHLGYEQYNQPWRAEDFAKAFKVIAEKAVESNADFVVIAGDLFHRSLPSPRTIKEAVE 66
Query: 370 IIRKYCLGDKPV 405
+ + + PV
Sbjct: 67 TLWMFRKENIPV 78
>UniRef50_Q9UZC9 Cluster: DNA double-strand break repair protein
mre11; n=1; Pyrococcus abyssi|Rep: DNA double-strand
break repair protein mre11 - Pyrococcus abyssi
Length = 423
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 193 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTE 369
+D+HLG+ + N R E+ AFE+ + + V VD I++ GDLF+ ++PS + +
Sbjct: 17 ADVHLGYEQFNRSQRAEEFAKAFEDAIKICVDEKVDFIVIAGDLFNSSRPSPGTIKTAVK 76
Query: 370 IIR 378
I++
Sbjct: 77 ILQ 79
>UniRef50_Q8DMQ1 Cluster: Tll0060 protein; n=1; Synechococcus
elongatus|Rep: Tll0060 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 428
Score = 44.0 bits (99), Expect = 0.005
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Frame = +1
Query: 175 LRILIASDIHLGF---MENDPVRGEDSFIAFEEVL-SLAVQCDVDLILLGGDLFDQ 330
+R L +D+HLG+ +++P R D F AF+ L + A+Q VD +L+ GDLF++
Sbjct: 2 VRFLHVADVHLGYNKYRQDNPSRMLDFFRAFDSALETYAIQAQVDFVLIAGDLFEE 57
>UniRef50_Q8TXI3 Cluster: DNA double-strand break repair protein
mre11; n=1; Methanopyrus kandleri|Rep: DNA double-strand
break repair protein mre11 - Methanopyrus kandleri
Length = 451
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 175 LRILIASDIHLGF-MENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 351
+R+ +D+HLG + N R E FE ++ +C VD++++ GDLF+ A+P
Sbjct: 1 MRMAHVADVHLGHALMNLRSREEAVMETFERLMEEVRECSVDVLVIAGDLFEHARPKTEA 60
Query: 352 MFKCTE 369
++ E
Sbjct: 61 LYLAVE 66
>UniRef50_Q2NFC6 Cluster: DNA double-strand break repair protein
Mre11; n=1; Methanosphaera stadtmanae DSM 3091|Rep: DNA
double-strand break repair protein Mre11 -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 393
Score = 43.6 bits (98), Expect = 0.007
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 172 TLRILIASDIHLGFMENDPVRGEDSFI-AFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 348
T++I +D HLG+ + E+ F FE+++ + DVD +L GDLF+ KP +
Sbjct: 2 TIKIAHMADTHLGYKQYGLNERENDFYKTFEKIIDDIISKDVDYVLHAGDLFEHPKPPIK 61
Query: 349 CMFKCTEIIRKYCLGDKPVSI 411
+ + K + P+ +
Sbjct: 62 ALLVAQKGFEKLLENNIPIFV 82
>UniRef50_A7BEB8 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 425
Score = 41.9 bits (94), Expect = 0.020
Identities = 23/79 (29%), Positives = 41/79 (51%)
Frame = +1
Query: 145 DISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 324
D+ A + IL SD HLG + G+ + E +++L + VD +L+ GD+F
Sbjct: 15 DVGALCHTGDMLILHTSDWHLGRTLHGASLGDSADAFIEWLVALVRERGVDAVLISGDVF 74
Query: 325 DQAKPSVNCMFKCTEIIRK 381
D+A P V+ + + +R+
Sbjct: 75 DRAVPPVDALARMRRALRE 93
>UniRef50_Q03B99 Cluster: DNA repair exonuclease; n=4;
Lactobacillus|Rep: DNA repair exonuclease -
Lactobacillus casei (strain ATCC 334)
Length = 373
Score = 41.5 bits (93), Expect = 0.027
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 342
+R L +D H+G ND ED FE+++ A VD I++ GDL+D+A PS
Sbjct: 1 MRFLHTADWHIGKKLNDFDLLEDQQAVFEQLVETAETHKVDAIVIAGDLYDRALPS 56
>UniRef50_O26641 Cluster: DNA double-strand break repair protein
mre11; n=1; Methanothermobacter thermautotrophicus str.
Delta H|Rep: DNA double-strand break repair protein
mre11 - Methanobacterium thermoautotrophicum
Length = 587
Score = 41.5 bits (93), Expect = 0.027
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = +1
Query: 193 SDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTEI 372
SD HLG ++ +R E F AF L A+Q DVD +++ GDLF P++ + + T
Sbjct: 177 SDCHLGAQKHPDLR-ELEFEAFRMALDDALQKDVDFMIIAGDLFHSNIPNMETVKRATLE 235
Query: 373 IRKYCLGDKPVSI 411
+R+ P+ +
Sbjct: 236 LRRVREAGVPIYV 248
>UniRef50_O67727 Cluster: ATP-dependent dsDNA exonuclease; n=1;
Aquifex aeolicus|Rep: ATP-dependent dsDNA exonuclease -
Aquifex aeolicus
Length = 379
Score = 41.1 bits (92), Expect = 0.035
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 339
+R++ SDIH G R ED A +V+ + DL+L+ GD+FD+A P
Sbjct: 1 MRLIHLSDIHAGKNLGRVSRNEDVVYALNQVVDFCKENKPDLVLVAGDVFDKANP 55
>UniRef50_Q0HTQ0 Cluster: Nuclease SbcCD, D subunit precursor; n=40;
Gammaproteobacteria|Rep: Nuclease SbcCD, D subunit
precursor - Shewanella sp. (strain MR-7)
Length = 400
Score = 41.1 bits (92), Expect = 0.035
Identities = 17/69 (24%), Positives = 39/69 (56%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 354
+R + SD H+G ++ ED +++++LA Q VD +++ GD++D++ P + +
Sbjct: 1 MRFIHTSDWHIGRQLHNQSLLEDQAYVLDQIVTLAEQHTVDAVIIAGDIYDRSIPPASAV 60
Query: 355 FKCTEIIRK 381
E++ +
Sbjct: 61 ALLDEVLNR 69
>UniRef50_Q9YFY8 Cluster: DNA double-strand break repair protein
mre11; n=1; Aeropyrum pernix|Rep: DNA double-strand
break repair protein mre11 - Aeropyrum pernix
Length = 409
Score = 41.1 bits (92), Expect = 0.035
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +1
Query: 178 RILIASDIHLGFMEND-PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 354
++L +D+HLG R +D F +FE V+ A++ D +L+ GDLFD+ K + +
Sbjct: 3 KVLHVADVHLGARPYGLEERRDDIFRSFEFVVETALKDRPDAVLIAGDLFDKPKLPLRDV 62
Query: 355 FKCTEIIR 378
+ E++R
Sbjct: 63 KQAVELVR 70
>UniRef50_Q5LYZ3 Cluster: ATP-dependent dsDNA exonuclease; n=6;
Streptococcaceae|Rep: ATP-dependent dsDNA exonuclease -
Streptococcus thermophilus (strain CNRZ 1066)
Length = 408
Score = 40.7 bits (91), Expect = 0.046
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 354
++ L SD H+G N E+ AF++++ LA+ VD +++ GDL+D+A P V+ +
Sbjct: 7 MKFLHTSDWHVGRTLNGWSLLEEQEWAFQQIVDLAISEKVDGVIISGDLYDRAVPPVDAI 66
>UniRef50_A6UUX3 Cluster: Metallophosphoesterase; n=1; Methanococcus
aeolicus Nankai-3|Rep: Metallophosphoesterase -
Methanococcus aeolicus Nankai-3
Length = 399
Score = 40.3 bits (90), Expect = 0.061
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 193 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTE 369
SD HLG+ + N R +D + AF + + D ++ GDLF+Q+ P +N ++ +
Sbjct: 7 SDNHLGYRQYNLDEREKDMYNAFNMCIDEIINIKPDFVVHSGDLFEQSTPPINALYTAIK 66
Query: 370 IIRKYCLGDKPVSI 411
K + PV I
Sbjct: 67 AFEKLKECNIPVYI 80
>UniRef50_Q9HRW4 Cluster: DNA double-strand break repair protein
mre11; n=5; Halobacteriaceae|Rep: DNA double-strand
break repair protein mre11 - Halobacterium salinarium
(Halobacterium halobium)
Length = 387
Score = 40.3 bits (90), Expect = 0.061
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 178 RILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 354
R++ D HLG+ + + P R +D AF+ V++ A+ VD ++ GDL+ +P + +
Sbjct: 3 RVIHTGDTHLGYQQYHAPQRRQDFLDAFDAVITDAIDEGVDAVVHAGDLYHDRQPGLRDI 62
Query: 355 FKCTEIIRKYCLGDKP 402
++R D P
Sbjct: 63 LDTIALLRPLQDADIP 78
>UniRef50_Q3A5P7 Cluster: DNA repair exonuclease; n=1; Pelobacter
carbinolicus DSM 2380|Rep: DNA repair exonuclease -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 370
Score = 39.9 bits (89), Expect = 0.081
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +1
Query: 175 LRILIASDIHLGFM-----ENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 339
+RIL +DIHLG + E R D AFE ++ LA+ V L+++ GDLF P
Sbjct: 2 IRILHTADIHLGAVFAELAECAAARRNDQLYAFERMVELAIDRKVHLLVVAGDLFASPWP 61
Query: 340 SVNCMFKCTEIIRKYC 387
+ + + ++ C
Sbjct: 62 TTDLVSHVRAGFQRLC 77
>UniRef50_Q7QVF9 Cluster: GLP_90_7352_9805; n=3; Giardia
intestinalis|Rep: GLP_90_7352_9805 - Giardia lamblia
ATCC 50803
Length = 817
Score = 39.9 bits (89), Expect = 0.081
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 178 RILIASDIHLGFMEND--PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 351
RI + +D HLGF P ++++ EE L LA + IL GD F+Q + S
Sbjct: 9 RIALFTDTHLGFTAPSARPCNAHENYLLLEECLCLARKLGAHAILHAGDFFNQNRLSSKK 68
Query: 352 MFKCTEIIRKY 384
+ K +R+Y
Sbjct: 69 VIKAICALRRY 79
>UniRef50_A0RW71 Cluster: DNA repair exonuclease; n=1; Cenarchaeum
symbiosum|Rep: DNA repair exonuclease - Cenarchaeum
symbiosum
Length = 417
Score = 39.9 bits (89), Expect = 0.081
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 324
+R ASDIHLGF + ++G + + FE+V+ + VD +L+ GD+F
Sbjct: 1 MRFAHASDIHLGFQDGAALQGIEREV-FEKVIDGCISRKVDFVLMPGDIF 49
>UniRef50_UPI00015BCD31 Cluster: UPI00015BCD31 related cluster; n=1;
unknown|Rep: UPI00015BCD31 UniRef100 entry - unknown
Length = 380
Score = 39.5 bits (88), Expect = 0.11
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 339
++ L DIH G + R +D+ A +V+ + VD IL+ GD+FDQ P
Sbjct: 2 IKFLHIGDIHAGKTLHSRSRNDDAEYAISQVIDFVKKEPVDFILMAGDIFDQYTP 56
>UniRef50_Q88WS0 Cluster: Exonuclease SbcD; n=2;
Lactobacillales|Rep: Exonuclease SbcD - Lactobacillus
plantarum
Length = 393
Score = 39.5 bits (88), Expect = 0.11
Identities = 18/60 (30%), Positives = 38/60 (63%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 354
+++L +D H+G N ++ AF+++L++A+ VD I++ GD++D+A PS + +
Sbjct: 1 MKLLHTADWHIGRTLNGYSLLDEQEAAFKQILTIALAEKVDGIVIAGDIYDRAVPSTDAV 60
>UniRef50_A7DNM9 Cluster: Metallophosphoesterase; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep:
Metallophosphoesterase - Candidatus Nitrosopumilus
maritimus SCM1
Length = 415
Score = 39.5 bits (88), Expect = 0.11
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +1
Query: 193 SDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 345
SDIHLGF + ++ + + FEEV+ ++ VD +L+ GDLF + P +
Sbjct: 8 SDIHLGFQDKKELQKIEQEV-FEEVVCTCIKQKVDFVLITGDLFHRNLPEM 57
>UniRef50_A5UJE8 Cluster: DNA repair exonuclease
(SbcD/Mre11-family), Rad32; n=1; Methanobrevibacter
smithii ATCC 35061|Rep: DNA repair exonuclease
(SbcD/Mre11-family), Rad32 - Methanobrevibacter smithii
(strain PS / ATCC 35061 / DSM 861)
Length = 407
Score = 39.5 bits (88), Expect = 0.11
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +1
Query: 193 SDIHLGFMENDPV-RGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 354
+D HLG+ + + R +D + F++++ ++ VD ++ GDLFD A+PS + +
Sbjct: 7 ADTHLGYRQFGLLEREKDFYEVFDKIIDKIIEEKVDFVIHSGDLFDSARPSPSAL 61
>UniRef50_A7HL21 Cluster: Metallophosphoesterase; n=1;
Fervidobacterium nodosum Rt17-B1|Rep:
Metallophosphoesterase - Fervidobacterium nodosum
Rt17-B1
Length = 397
Score = 39.1 bits (87), Expect = 0.14
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Frame = +1
Query: 175 LRILIASDIHLG------FMEND--PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 330
++IL SD HLG EN R D F A E ++ A++ +VDL ++ GDLFD
Sbjct: 1 MKILHTSDWHLGKRPVGGIGENSYSDFRYNDYFNAAEYIVDRAIEENVDLFIIAGDLFDS 60
Query: 331 AKPSVNCMFKCTEIIRKYCLGDKPV 405
K + + + + I++K D PV
Sbjct: 61 NKINPDILERTEGILKKLKDKDIPV 85
>UniRef50_Q9AN75 Cluster: ID473; n=1; Bradyrhizobium japonicum|Rep:
ID473 - Bradyrhizobium japonicum
Length = 173
Score = 38.7 bits (86), Expect = 0.19
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 342
+RIL +D H+G R + FE + + V+ DVD +++ GD+FD PS
Sbjct: 2 IRILHTADWHIGQTLRGFSREHEHRKVFERLEEIVVERDVDALIIAGDVFDSQNPS 57
>UniRef50_A6TVN1 Cluster: Nuclease SbcCD, D subunit; n=3;
Clostridiaceae|Rep: Nuclease SbcCD, D subunit -
Alkaliphilus metalliredigens QYMF
Length = 406
Score = 38.7 bits (86), Expect = 0.19
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = +1
Query: 175 LRILIASDIHLG--FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 348
++IL SD HLG N + ++ F+ EE++++ + ++DLIL+ GD++D + P
Sbjct: 1 MKILHTSDWHLGKTLEGNSRLAEQERFL--EELVTIVNEKEIDLILVAGDIYDTSNPPAQ 58
Query: 349 CMFKCTEIIRKYCL-GDKPVSI 411
+ ++K G +P+ I
Sbjct: 59 AERLFYDSVKKLSANGQRPIII 80
>UniRef50_UPI00015BAD8F Cluster: metallophosphoesterase; n=1;
Ignicoccus hospitalis KIN4/I|Rep: metallophosphoesterase
- Ignicoccus hospitalis KIN4/I
Length = 384
Score = 38.3 bits (85), Expect = 0.25
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 181 ILIASDIHLGFMEND-PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 339
I+ A+D+HLG + R ED + AFE+++ ++ D +++ GDLFD P
Sbjct: 3 IVHAADVHLGKRQYGLKEREEDFYKAFEDLVEATIREKADALVIAGDLFDTPVP 56
>UniRef50_Q5XUC9 Cluster: Zona pellucida C related protein; n=4;
Danio rerio|Rep: Zona pellucida C related protein -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 552
Score = 38.3 bits (85), Expect = 0.25
Identities = 21/83 (25%), Positives = 40/83 (48%)
Frame = +1
Query: 133 MIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG 312
++E+D+S W P D + S++ + + P + E + FE V L + D+ L
Sbjct: 393 VVEDDLSMWDPKD---FYLMSELDMKPVGGAPSKPEKPHLNFESVFDLPLNDQPDINLAP 449
Query: 313 GDLFDQAKPSVNCMFKCTEIIRK 381
+F+ AK +F+ E++ K
Sbjct: 450 EKVFESAKEKDETVFRQVEVVFK 472
>UniRef50_Q2AI56 Cluster: Exonuclease SbcD; n=1; Halothermothrix
orenii H 168|Rep: Exonuclease SbcD - Halothermothrix
orenii H 168
Length = 435
Score = 38.3 bits (85), Expect = 0.25
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 339
LRIL +D HLG R E+ EE++ +A VD++L+ GD+FD P
Sbjct: 27 LRILHTADWHLGKHLEGWSRYEEQKEFVEEIIEIADDNKVDMVLICGDIFDTTNP 81
>UniRef50_Q2AE44 Cluster: Metallophosphoesterase; n=1;
Halothermothrix orenii H 168|Rep: Metallophosphoesterase
- Halothermothrix orenii H 168
Length = 464
Score = 38.3 bits (85), Expect = 0.25
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Frame = +1
Query: 169 DTLRILIASDIHLGFMENDPVR-----GE----DSFIAFEEVLSLAVQCDVDLILLGGDL 321
D L+ + ASDIHLG + + GE ++ AF + + A++ +VD ++L GD+
Sbjct: 8 DELKFIHASDIHLGSVLHTGTTHKGDIGEIVKKATYKAFSRICNHAIEFEVDFVVLSGDI 67
Query: 322 FDQAKPSVNCM 354
FD+ SV M
Sbjct: 68 FDRESKSVVAM 78
>UniRef50_Q67MD2 Cluster: DNA repair exonuclease; n=1;
Symbiobacterium thermophilum|Rep: DNA repair exonuclease
- Symbiobacterium thermophilum
Length = 411
Score = 37.9 bits (84), Expect = 0.33
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 342
+RIL +D HLG R E+ +E+ ++ + +DL+L+ GD+FD PS
Sbjct: 1 MRILHTADWHLGRTLEGRSRQEEHEAFVDELCAMVREERIDLVLIAGDVFDTGNPS 56
>UniRef50_A4YET4 Cluster: Metallophosphoesterase; n=1;
Metallosphaera sedula DSM 5348|Rep:
Metallophosphoesterase - Metallosphaera sedula DSM 5348
Length = 379
Score = 37.9 bits (84), Expect = 0.33
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 181 ILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 339
IL SD HLG N R +D + F +++ LA++ V I+ GDLFD KP
Sbjct: 2 ILHISDTHLGSRRYNRDSREQDVYDVFSQLIDLAIREHVRAIVHSGDLFDVYKP 55
>UniRef50_Q3ICS5 Cluster: Exonuclease sbcCD subunit D; n=2;
Alteromonadales|Rep: Exonuclease sbcCD subunit D -
Pseudoalteromonas haloplanktis (strain TAC 125)
Length = 415
Score = 37.5 bits (83), Expect = 0.43
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV--- 345
+++L SD HLG + R + F +L+ V+ +DL+L+ GD++ A PS
Sbjct: 1 MKVLHTSDWHLGQQFYEYDRRHEHLAFFTWLLATLVEQQIDLLLVAGDIYHTATPSASAE 60
Query: 346 NCMFKCTEIIRKYC 387
N +++ + +K C
Sbjct: 61 NQLYQFIKDAKKQC 74
>UniRef50_Q6I2G3 Cluster: DNA repair exonuclease family protein;
n=11; Bacillus cereus group|Rep: DNA repair exonuclease
family protein - Bacillus anthracis
Length = 432
Score = 37.5 bits (83), Expect = 0.43
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 238 EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSI 411
+ +F +FE ++ A+Q VD +LL GDL+D S+ E +++ D PV I
Sbjct: 54 QSTFESFERIIDKAIQERVDFVLLAGDLYDAETRSLRAQVFVREQMKRLSQYDIPVFI 111
>UniRef50_A7HCA1 Cluster: Nuclease SbcCD, D subunit; n=1;
Anaeromyxobacter sp. Fw109-5|Rep: Nuclease SbcCD, D
subunit - Anaeromyxobacter sp. Fw109-5
Length = 386
Score = 37.5 bits (83), Expect = 0.43
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 339
LRIL SD HLG ++ ED A E + + + D +L+ GD+FD+A P
Sbjct: 8 LRILHTSDWHLGRALHEESLLEDQAWALERLREVLREARPDALLIAGDVFDRAVP 62
>UniRef50_A6Q875 Cluster: DNA double-strand break repair protein;
n=1; Sulfurovum sp. NBC37-1|Rep: DNA double-strand break
repair protein - Sulfurovum sp. (strain NBC37-1)
Length = 373
Score = 37.5 bits (83), Expect = 0.43
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGE-------DSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 333
++I+ SD HLGF + D E D + AFE+V++ + D + GDLF +A
Sbjct: 1 MKIIHFSDTHLGFSDLDITNEEGINQREADFYKAFEDVINAIIDSRPDYAIHTGDLFHRA 60
Query: 334 KPSVNCM-FKCTEIIR 378
PS + F T++ R
Sbjct: 61 SPSNRAITFALTQLKR 76
>UniRef50_A6P235 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 380
Score = 37.5 bits (83), Expect = 0.43
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 354
++++ SD+HLG ND ED E+L + + D +L+ GD++D++ PS +
Sbjct: 1 MKLIHLSDLHLGKRVNDFSMLEDQQYILAEILQIIDREKPDGVLIAGDVYDKSVPSAEAV 60
>UniRef50_Q8TNC7 Cluster: Phosphoesterase; n=2; Methanosarcina|Rep:
Phosphoesterase - Methanosarcina acetivorans
Length = 443
Score = 37.5 bits (83), Expect = 0.43
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Frame = +1
Query: 172 TLRILIASDIHL-----GFMENDPVRGED----SFIAFEEVLSLAVQCDVDLILLGGDLF 324
TL + A+D+HL G D GE +F A+E ++ L ++ +VD +L+ GD++
Sbjct: 21 TLSFVHAADLHLDSPFVGISGIDQELGERLAKATFQAYEAIIELCMEEEVDFLLIAGDVY 80
Query: 325 DQAKPSVNCMFKCTEIIRK 381
D A ++ + E +RK
Sbjct: 81 DSADKNLYAQVRFIEGLRK 99
>UniRef50_Q8Y6N8 Cluster: Lmo1646 protein; n=12; Listeria|Rep:
Lmo1646 protein - Listeria monocytogenes
Length = 374
Score = 37.1 bits (82), Expect = 0.57
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +1
Query: 175 LRILIASDIHLG-FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 351
++ L +D+HLG + + E +I ++ +A + VD ++L GDL+D+A P +
Sbjct: 1 MKFLHTADLHLGKIVSGVSMLAEQEYI-LTQITQIAEEEQVDALILAGDLYDRAVPPADA 59
Query: 352 MFKCTEIIRKY 384
+ +I+ K+
Sbjct: 60 VKVLNDILVKW 70
>UniRef50_Q1FMZ5 Cluster: Nuclease SbcCD, D subunit; n=1;
Clostridium phytofermentans ISDg|Rep: Nuclease SbcCD, D
subunit - Clostridium phytofermentans ISDg
Length = 375
Score = 37.1 bits (82), Expect = 0.57
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 345
++ + SD+H+G N+ ED +++L LA + D +L+ GD++D+ P++
Sbjct: 1 MKFMHLSDLHIGKRVNEFSMIEDQTYILQKILELADEEKPDAVLIAGDVYDKNLPTI 57
>UniRef50_A0LM47 Cluster: Nuclease SbcCD, D subunit; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Nuclease SbcCD, D
subunit - Syntrophobacter fumaroxidans (strain DSM 10017
/ MPOB)
Length = 383
Score = 37.1 bits (82), Expect = 0.57
Identities = 19/73 (26%), Positives = 38/73 (52%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 354
+RIL +D HLG + + D + ++ LA + D++L+ GD++D+A P + +
Sbjct: 1 MRILHTADWHLGRIFHGVHLTADQAFVLDRLVRLASESKPDVVLVSGDVYDRAVPPPDAV 60
Query: 355 FKCTEIIRKYCLG 393
+ + + LG
Sbjct: 61 ALLDDTLSRLVLG 73
>UniRef50_Q6L2H7 Cluster: DNA repair protein; n=2;
Thermoplasmatales|Rep: DNA repair protein - Picrophilus
torridus
Length = 370
Score = 37.1 bits (82), Expect = 0.57
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFI-AFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 351
+R + SD HLG+ + E+ F AF E + + + VD + GDLFD PS
Sbjct: 2 VRFIHFSDTHLGYKQYMMDERENDFYEAFNEAIDIGINEHVDFFVHSGDLFDTWLPSNRA 61
Query: 352 M 354
M
Sbjct: 62 M 62
>UniRef50_P62132 Cluster: DNA double-strand break repair protein
mre11; n=1; Nanoarchaeum equitans|Rep: DNA double-strand
break repair protein mre11 - Nanoarchaeum equitans
Length = 361
Score = 37.1 bits (82), Expect = 0.57
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 181 ILIASDIHLG-FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 342
I SD+HLG N E S+ A ++ ++ DL+L+GGD+FD+ K S
Sbjct: 2 IAFISDLHLGNIYANKKETEEHSYNALAKIEEKLLEYQPDLVLVGGDIFDKNKVS 56
>UniRef50_Q830T2 Cluster: Exonuclease SbcD; n=3;
Lactobacillales|Rep: Exonuclease SbcD - Enterococcus
faecalis (Streptococcus faecalis)
Length = 378
Score = 36.3 bits (80), Expect = 1.0
Identities = 13/34 (38%), Positives = 26/34 (76%)
Frame = +1
Query: 253 AFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 354
AFE++L++A + VD +++ GDL+D++ P+V +
Sbjct: 27 AFEQILAIAKEEQVDAVVIAGDLYDRSVPAVEAV 60
>UniRef50_Q74D96 Cluster: Nuclease SbcCD, D subunit, putative; n=2;
Geobacter|Rep: Nuclease SbcCD, D subunit, putative -
Geobacter sulfurreducens
Length = 376
Score = 36.3 bits (80), Expect = 1.0
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Frame = +1
Query: 175 LRILIASDIHLG-----FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFD 327
+R L +D+HL F + R D F+ +++LA++ +VD IL+ GDLFD
Sbjct: 3 IRFLHTADLHLDSPLRTFGDLARERRRDFLKTFDRIVNLAIKREVDCILIAGDLFD 58
>UniRef50_Q2RL80 Cluster: Metallophosphoesterase; n=1; Moorella
thermoacetica ATCC 39073|Rep: Metallophosphoesterase -
Moorella thermoacetica (strain ATCC 39073)
Length = 374
Score = 36.3 bits (80), Expect = 1.0
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Frame = +1
Query: 178 RILIASDIHLGFMEN--DPVRGEDSFIAFEEVLSLAVQCDVD------LILLGGDLFDQA 333
R+L +D+HLG+ + PVR E+ + A VL AV +D L+L+ GDLFD
Sbjct: 3 RVLHLADLHLGYRPDLPAPVR-EEVYRARNRVLQAAVDLALDPRQGISLVLIAGDLFDNH 61
Query: 334 KPSVN 348
+P +
Sbjct: 62 RPEAS 66
>UniRef50_P62131 Cluster: DNA double-strand break repair protein
mre11; n=4; Methanococcus|Rep: DNA double-strand break
repair protein mre11 - Methanococcus maripaludis
Length = 372
Score = 36.3 bits (80), Expect = 1.0
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 193 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTE 369
+D HLG+ + N R D + +F E + ++ D ++ GDLF+ +P VN + E
Sbjct: 7 ADNHLGYRQYNLDERENDIYESFLECIDKIIEIRPDFVIHSGDLFESPQPPVNAIRCAME 66
Query: 370 IIRKYCLGDKPVSIELL 420
+ K L +K + I L+
Sbjct: 67 GLLK--LKEKNIPIYLI 81
>UniRef50_Q3ADJ2 Cluster: Ser/Thr protein phosphatase family
protein; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: Ser/Thr protein phosphatase family protein -
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 331
Score = 35.9 bits (79), Expect = 1.3
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIA-----FEEVLSLAVQCDVDLILLGGDLFDQAKP 339
+R L +D H F N P D F EEV+ +A V+ +L GGDLF+ P
Sbjct: 1 MRFLYITDTH--FRGNSPQNRMDDFPQTLRKKMEEVVQVAQDLQVEAVLHGGDLFEIPNP 58
Query: 340 SVN 348
+VN
Sbjct: 59 AVN 61
>UniRef50_A5ZTK8 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 405
Score = 35.9 bits (79), Expect = 1.3
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 193 SDIHLGF-MENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 354
SD+H+G + N +R + +I +E+ LA + D +++ GD++D+A PS +
Sbjct: 30 SDLHIGLKLMNRDLREDQEYI-LDEITELARRKRPDAVVIAGDIYDKAVPSAEAV 83
>UniRef50_A0P1W8 Cluster: Putative DNA repair exonuclease; n=1;
Stappia aggregata IAM 12614|Rep: Putative DNA repair
exonuclease - Stappia aggregata IAM 12614
Length = 392
Score = 35.9 bits (79), Expect = 1.3
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Frame = +1
Query: 175 LRILIASDIHLGF------MENDPVRG---EDSFIAFEEVLSLAVQCDVDLILLGGDLFD 327
+R+L ++DIHLG M N + + + AF + LA+ VD ++L GD+FD
Sbjct: 1 MRLLASADIHLGSPIRSAAMRNPELGDRLKQATRNAFIRTVDLAISESVDALVLAGDIFD 60
Query: 328 QAKPSV-NCMFKCTEIIR 378
+ +P + C F ++ R
Sbjct: 61 KDQPDLKTCAFLLAQLTR 78
>UniRef50_Q9X1X0 Cluster: Exonuclease, putative; n=3;
Thermotoga|Rep: Exonuclease, putative - Thermotoga
maritima
Length = 385
Score = 35.5 bits (78), Expect = 1.7
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Frame = +1
Query: 175 LRILIASDIHLG---FMENDPV-RGEDSFIAFEEVLSLAVQCDVDLILLGGDLF-DQAKP 339
L+IL SD HLG + + PV R E+ A ++V+ A + +VDLILL GDL + P
Sbjct: 7 LKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNP 66
Query: 340 SVNCMFKCTEIIRK 381
SV + + +++
Sbjct: 67 SVVALHDLLDYLKR 80
>UniRef50_Q3W6X0 Cluster: Exonuclease SbcD; n=3;
Actinomycetales|Rep: Exonuclease SbcD - Frankia sp.
EAN1pec
Length = 387
Score = 35.5 bits (78), Expect = 1.7
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 339
++ L SD HLG R ++ E++ +A + +VD +L+ GD++D A P
Sbjct: 1 MKFLHTSDWHLGKTLKGRNRLDEQRAVLGEIIGIARKHEVDAVLVAGDVYDSAAP 55
>UniRef50_Q04FF3 Cluster: DNA repair exonuclease; n=2; Oenococcus
oeni|Rep: DNA repair exonuclease - Oenococcus oeni
(strain BAA-331 / PSU-1)
Length = 413
Score = 35.5 bits (78), Expect = 1.7
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 244 SFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 342
+F AF V+ LAV VD +L GDLFD ++ S
Sbjct: 45 TFTAFSNVIKLAVDRHVDFVLFPGDLFDSSQQS 77
>UniRef50_A3H5S8 Cluster: Metallophosphoesterase; n=1; Caldivirga
maquilingensis IC-167|Rep: Metallophosphoesterase -
Caldivirga maquilingensis IC-167
Length = 405
Score = 35.5 bits (78), Expect = 1.7
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +1
Query: 193 SDIHLGFMEND-PVRGEDSFIAF----EEVLSLAVQCDVDLILLGGDLFDQAKPS 342
SD+HLG + R D AF E++ L + VD++L+ GDLFD +PS
Sbjct: 7 SDVHLGRRQYGLEARARDYEAAFLNAISEIIKLREERGVDVVLVTGDLFDNPRPS 61
>UniRef50_Q897Z1 Cluster: Exonuclease sbcD; n=2; Clostridium|Rep:
Exonuclease sbcD - Clostridium tetani
Length = 391
Score = 35.1 bits (77), Expect = 2.3
Identities = 15/60 (25%), Positives = 35/60 (58%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 354
++I+ D H+G + N+ ED I E+++++ + + +++ GDL+D++ P V +
Sbjct: 1 MKIIHTGDWHIGKIVNEFSMIEDQKIVLEQLINIIKEEKPNALIIAGDLYDRSIPPVEAV 60
>UniRef50_Q5SIS5 Cluster: Exonuclease SbcD; n=2; Thermus
thermophilus|Rep: Exonuclease SbcD - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 372
Score = 35.1 bits (77), Expect = 2.3
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 342
+R+L +D HLG + R + A ++L L VDL+++ GDLFD+ + S
Sbjct: 1 MRLLHTADWHLGKLLKGVDRTPEIAAALRDLLGLVRSERVDLVVVSGDLFDRPQVS 56
>UniRef50_Q2S4Q6 Cluster: Nuclease SbcCD, D subunit subfamily,
putative; n=1; Salinibacter ruber DSM 13855|Rep:
Nuclease SbcCD, D subunit subfamily, putative -
Salinibacter ruber (strain DSM 13855)
Length = 453
Score = 35.1 bits (77), Expect = 2.3
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Frame = +1
Query: 169 DTLRILIASDIHLGFM---ENDPVRGEDSFI-----AFEEVLSLAVQCDVDLILLGGDLF 324
D + +L +DIHLGF DP G ++ + + E V+ A+ DVD L GD +
Sbjct: 21 DVVTLLHTADIHLGFKTHGRRDPDTGLNTRLLDVRRSLEAVVQRALDADVDAFLFCGDAY 80
Query: 325 DQAKPSVNCMFKCTEIIRKYCLGDKPV 405
A P+ + +R D PV
Sbjct: 81 HTADPTPTQQDIFVQCLRPLADADIPV 107
Score = 35.1 bits (77), Expect = 2.3
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 467 PNLNISYPILSIHGNHDDPVGQGSVSSLDILS-ITGLVNYFGK 592
P + P++ I GNHD PV G SSLDI I G V+ + K
Sbjct: 99 PLADADIPVVLIVGNHDHPVTFGRASSLDIFDHIAGAVHCYRK 141
>UniRef50_A5EW10 Cluster: Exonuclease SbcD; n=1; Dichelobacter
nodosus VCS1703A|Rep: Exonuclease SbcD - Dichelobacter
nodosus (strain VCS1703A)
Length = 396
Score = 35.1 bits (77), Expect = 2.3
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 348
++IL ++D HLG + R + + L + D++LL GD+FD A P V+
Sbjct: 1 MKILHSADWHLGAKLHGQSRESEQQAFLDWFLETLARVQPDILLLAGDIFDTATPPVS 58
>UniRef50_A1R7R7 Cluster: Putative nuclease SbcCD, D subunit; n=1;
Arthrobacter aurescens TC1|Rep: Putative nuclease SbcCD,
D subunit - Arthrobacter aurescens (strain TC1)
Length = 396
Score = 35.1 bits (77), Expect = 2.3
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = +1
Query: 175 LRILIASDIHLG--FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 348
+R+L SD HLG F + + +F+ ++++SL VD++L+ GD++D+A P ++
Sbjct: 1 MRLLHTSDWHLGRSFHGVGMLDAQRNFV--DQLVSLVQSKSVDVVLIAGDVYDRALPGLD 58
>UniRef50_A1S0I8 Cluster: Metallophosphoesterase; n=1; Thermofilum
pendens Hrk 5|Rep: Metallophosphoesterase - Thermofilum
pendens (strain Hrk 5)
Length = 391
Score = 35.1 bits (77), Expect = 2.3
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +1
Query: 169 DTLRILIASDIHLG--FMENDPV---RGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 333
+ LRI+ +D HL F P R ED AF V+ AV+ L L+ GDLFD
Sbjct: 2 EVLRIVHTADNHLDPKFTFLGPKVRDRREDFLNAFRRVVDFAVEAKPHLFLVSGDLFDSV 61
Query: 334 KP 339
P
Sbjct: 62 NP 63
>UniRef50_UPI00015C5C4B Cluster: hypothetical protein CKO_02773;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_02773 - Citrobacter koseri ATCC BAA-895
Length = 449
Score = 34.7 bits (76), Expect = 3.1
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 339
+RIL SD HLG R + + +L A VD I++ GD+FD P
Sbjct: 48 MRILHTSDWHLGQNFYSKSRAAEHLAFLDWLLETAQSHQVDAIIVAGDIFDTGSP 102
>UniRef50_Q9RT45 Cluster: Exonuclease SbcD, putative; n=2;
Deinococcus|Rep: Exonuclease SbcD, putative -
Deinococcus radiodurans
Length = 416
Score = 34.7 bits (76), Expect = 3.1
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 348
+R+L +D H G + R + A E+ LA D +L+ GDLFD PS +
Sbjct: 24 MRVLHTADFHAGRLLKGFDRTPEIHDALVEIAGLARTERADAVLVSGDLFDTGNPSAD 81
>UniRef50_Q8EP66 Cluster: Exonuclease; n=13; Bacillaceae|Rep:
Exonuclease - Oceanobacillus iheyensis
Length = 388
Score = 34.7 bits (76), Expect = 3.1
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 354
++I +D HLG + ED + ++ + D++++ GDL+D+A P V+ +
Sbjct: 1 MKIFHTADWHLGKLVQGIYMTEDQNYILNQFVAEVEREQPDVVIIAGDLYDRAVPPVDAV 60
Query: 355 FKCTEIIRKYCLG 393
+I+ K G
Sbjct: 61 HLLDQILDKIIHG 73
>UniRef50_Q7UKG1 Cluster: Probable phosphoesterase yhaO-putative DNA
repair exonuclease; n=1; Pirellula sp.|Rep: Probable
phosphoesterase yhaO-putative DNA repair exonuclease -
Rhodopirellula baltica
Length = 431
Score = 34.7 bits (76), Expect = 3.1
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Frame = +1
Query: 178 RILIASDIHLGF-------MENDPVRG--EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 330
RIL A+DIHL E+ PV E S A E + LA++ VDL+++ GDL+D
Sbjct: 5 RILHAADIHLDSPLQKLDAYEDAPVDEIREASRRALENMTDLAIEEQVDLVVIAGDLYDG 64
Query: 331 AKPSVN 348
P N
Sbjct: 65 DWPDQN 70
>UniRef50_Q5P494 Cluster: Exonuclease SbcD; n=1; Azoarcus sp.
EbN1|Rep: Exonuclease SbcD - Azoarcus sp. (strain EbN1)
(Aromatoleum aromaticum (strain EbN1))
Length = 426
Score = 34.7 bits (76), Expect = 3.1
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 342
+R+L SD HLG +D R + + +L+L D++L+ GD+FD A PS
Sbjct: 1 MRLLHTSDWHLGQSLHDFDRTYEHQQFLDWLLALIATERPDVLLIAGDVFDNANPS 56
>UniRef50_Q38Y02 Cluster: Putative metallo-phosphoesterase; n=1;
Lactobacillus sakei subsp. sakei 23K|Rep: Putative
metallo-phosphoesterase - Lactobacillus sakei subsp.
sakei (strain 23K)
Length = 397
Score = 34.7 bits (76), Expect = 3.1
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 238 EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 345
E +F AFE+++ A+ VD +LL GD FDQ S+
Sbjct: 31 ESTFTAFEKLVQTAIDEAVDFVLLVGDSFDQEAQSL 66
>UniRef50_A5WEF9 Cluster: Nuclease SbcCD, D subunit; n=3;
Psychrobacter|Rep: Nuclease SbcCD, D subunit -
Psychrobacter sp. PRwf-1
Length = 537
Score = 34.7 bits (76), Expect = 3.1
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 136 IENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQ-CDVDLILLG 312
+ N S P L IL SD HLG +R + F AF L+ +Q VD++++
Sbjct: 1 MSNSTSLSHPPKPLTILHTSDWHLGRRLYGQLRYHE-FEAFLAWLTQTLQQYQVDVLIVA 59
Query: 313 GDLFDQAKPS 342
GD+FD PS
Sbjct: 60 GDVFDTMTPS 69
>UniRef50_Q65LT8 Cluster: YhaO; n=4; Bacillus|Rep: YhaO - Bacillus
licheniformis (strain DSM 13 / ATCC 14580)
Length = 414
Score = 34.3 bits (75), Expect = 4.0
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +1
Query: 244 SFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIEL 417
+F + E V LA+ D ILL GDLFD+A S+ K +RK L K +I++
Sbjct: 42 TFKSAENVFKLAIDEQADFILLAGDLFDEANRSL----KAQMFLRKQFLKLKENNIQV 95
>UniRef50_Q2IN32 Cluster: Nuclease SbcCD, D subunit; n=2;
Myxococcaceae|Rep: Nuclease SbcCD, D subunit -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 428
Score = 34.3 bits (75), Expect = 4.0
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRG--EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 339
LRIL +D HLG + RG + F+A+ +L A VD +++ GD+FD A P
Sbjct: 14 LRILHTADWHLGHALHGVDRGPEHERFVAW--LLDTAEAEAVDAVIVAGDVFDAANP 68
>UniRef50_Q1NCL0 Cluster: Nuclease SbcCD, D subunit; n=1;
Sphingomonas sp. SKA58|Rep: Nuclease SbcCD, D subunit -
Sphingomonas sp. SKA58
Length = 410
Score = 34.3 bits (75), Expect = 4.0
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +1
Query: 178 RILIASDIHLG--FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 351
R++ +SD H+G ++ ++F+++ +L V + DL+L+ GD++D A P V+
Sbjct: 9 RLIHSSDWHIGHELFSHEREAEHEAFLSW--LLDRLVAEEADLLLVTGDIYDVANPPVSA 66
Query: 352 MFKCTEIIR 378
M + +R
Sbjct: 67 MARLYAFLR 75
>UniRef50_A5IKC9 Cluster: Putative uncharacterized protein; n=1;
Thermotoga petrophila RKU-1|Rep: Putative
uncharacterized protein - Thermotoga petrophila RKU-1
Length = 809
Score = 34.3 bits (75), Expect = 4.0
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 590 KWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFA 709
+W+ YT + ISP LL+KG T + G S LK Q LS + A
Sbjct: 368 EWSGYTGIYISPDLLEKGYTEVLNGGFS-LKLQNLSEMSA 406
>UniRef50_A3WLK0 Cluster: Exonuclease SbcD, putative; n=1;
Idiomarina baltica OS145|Rep: Exonuclease SbcD, putative
- Idiomarina baltica OS145
Length = 382
Score = 34.3 bits (75), Expect = 4.0
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 339
++IL SD HLG + + E ++++ + Q VD +++ GD++D++ P
Sbjct: 1 MKILHTSDWHLGRLFHQQSLLEQQIELLQQIVEIIDQQAVDAVIIAGDIYDRSVP 55
>UniRef50_Q03QD8 Cluster: DNA repair exonuclease; n=1; Lactobacillus
brevis ATCC 367|Rep: DNA repair exonuclease -
Lactobacillus brevis (strain ATCC 367 / JCM 1170)
Length = 404
Score = 33.9 bits (74), Expect = 5.3
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 238 EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSI 411
+ +F A +V A+ VD ++L GDLFD+++ SV E + L + PV +
Sbjct: 31 QSTFAAVTKVFDRAISEHVDFVVLAGDLFDRSEQSVAAQAYLFEQFDRLRLANIPVFV 88
>UniRef50_A6WB40 Cluster: Metallophosphoesterase; n=1; Kineococcus
radiotolerans SRS30216|Rep: Metallophosphoesterase -
Kineococcus radiotolerans SRS30216
Length = 515
Score = 33.9 bits (74), Expect = 5.3
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Frame = +1
Query: 193 SDIHLGFME---NDPVRG-----EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 348
+D HLG+ + P G D ++++ V+ + +VDL++ GGD F Q+ PS+
Sbjct: 12 ADAHLGYAARCGSHPASGLNHRVRDGYLSYRAVVRDMIAKEVDLVIDGGDTFHQSHPSIG 71
Query: 349 CM 354
+
Sbjct: 72 AI 73
>UniRef50_A5IU09 Cluster: Metallophosphoesterase; n=16;
Staphylococcus|Rep: Metallophosphoesterase -
Staphylococcus aureus subsp. aureus JH9
Length = 398
Score = 33.9 bits (74), Expect = 5.3
Identities = 11/30 (36%), Positives = 23/30 (76%)
Frame = +1
Query: 238 EDSFIAFEEVLSLAVQCDVDLILLGGDLFD 327
+ ++ +F+ ++ +A+Q DVD +++ GDLFD
Sbjct: 32 KSAYESFKNIVDIALQQDVDFVIIAGDLFD 61
>UniRef50_A1SK69 Cluster: Nuclease SbcCD, D subunit; n=2;
Actinomycetales|Rep: Nuclease SbcCD, D subunit -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 386
Score = 33.9 bits (74), Expect = 5.3
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +1
Query: 175 LRILIASDIHLG--FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 348
+RIL SD HLG F + + +++ + +L + + VDL+++ GD++D+A P V+
Sbjct: 1 MRILHTSDWHLGRSFHREGMLGHQAAYV--DHLLEVVERERVDLVVVAGDVYDRALPHVD 58
Query: 349 CMFKCTEIIRK 381
+ E + +
Sbjct: 59 AVRLADETLAR 69
>UniRef50_A1K1W1 Cluster: Exonuclease SbcD, putative; n=4;
Betaproteobacteria|Rep: Exonuclease SbcD, putative -
Azoarcus sp. (strain BH72)
Length = 381
Score = 33.9 bits (74), Expect = 5.3
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 354
+R L +D HLG + + ED + + LA + D IL+ GD++D++ P + +
Sbjct: 1 MRFLHTADWHLGRVYHGVSLLEDQAHVLRDFVRLAGETRPDAILIAGDVYDRSVPPADAV 60
Query: 355 FKCTEIIRKYCLG 393
E + + +G
Sbjct: 61 RLLDETLTELVVG 73
>UniRef50_Q3IPC0 Cluster: Putative uncharacterized protein; n=1;
Natronomonas pharaonis DSM 2160|Rep: Putative
uncharacterized protein - Natronomonas pharaonis (strain
DSM 2160 / ATCC 35678)
Length = 441
Score = 33.9 bits (74), Expect = 5.3
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Frame = +1
Query: 172 TLRILIASDIHLGFM-------ENDPVRGEDSFI--AFEEVLSLAVQCDVDLILLGGDLF 324
T+R L +D+HLG + DS I A E + A++ DVD +++ GDL+
Sbjct: 2 TVRFLHTADLHLGSQLKTQHRQATGTIETLDSAIYTAVERLFDTAIEEDVDFVVIAGDLY 61
Query: 325 DQAKPSV 345
D+ SV
Sbjct: 62 DEDSRSV 68
>UniRef50_Q1VZW8 Cluster: Exonuclease SbcD; n=1; Psychroflexus
torquis ATCC 700755|Rep: Exonuclease SbcD -
Psychroflexus torquis ATCC 700755
Length = 403
Score = 33.5 bits (73), Expect = 7.1
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 342
+RIL +D H+G + +D + + + + D+D++L+ GD+FD + PS
Sbjct: 1 MRILHTADWHIGKKLHKKELYQDFDLFIDWMCQFLPENDIDILLVSGDVFDFSNPS 56
>UniRef50_A7DFW6 Cluster: Nuclease SbcCD, D subunit; n=3;
Alphaproteobacteria|Rep: Nuclease SbcCD, D subunit -
Methylobacterium extorquens PA1
Length = 415
Score = 33.5 bits (73), Expect = 7.1
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 342
+R+L D H+G R + F + S+ V+ +VD +++ GD+FD PS
Sbjct: 2 IRVLHTGDWHIGQTLRGFSREREHDAVFGCLESIVVEREVDALVVAGDVFDSQNPS 57
>UniRef50_A3YYZ0 Cluster: Putative exonuclease; n=1; Synechococcus
sp. WH 5701|Rep: Putative exonuclease - Synechococcus
sp. WH 5701
Length = 396
Score = 33.5 bits (73), Expect = 7.1
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 339
+R+L SD HLG + ++ +++LA VD +L+ GDL+D+A P
Sbjct: 1 MRLLHTSDWHLGRSFHGASLLQEQAEVLARIVALARDGVVDAVLIAGDLYDRAIP 55
>UniRef50_A3I3N6 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. B14905|Rep: Putative uncharacterized
protein - Bacillus sp. B14905
Length = 404
Score = 33.5 bits (73), Expect = 7.1
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +1
Query: 244 SFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSI 411
+F AF++++ A+Q D +L+ GD++D S+ K E + K + PV I
Sbjct: 36 TFDAFDKIIQKAIQEQPDFLLIVGDIYDGENRSLQAQRKFQEAMEKLFQHNIPVII 91
>UniRef50_Q9A4M3 Cluster: Tryptophan halogenase, putative; n=6;
Alphaproteobacteria|Rep: Tryptophan halogenase, putative
- Caulobacter crescentus (Caulobacter vibrioides)
Length = 509
Score = 33.1 bits (72), Expect = 9.3
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 720 WKWRDPMKHWTGSIYLYYIKIMLTEDTV 803
W+WR P++H TG+ Y+Y + + ED V
Sbjct: 270 WRWRIPLQHRTGNGYVYSSRDISDEDAV 297
>UniRef50_Q2K465 Cluster: Putative sensory box/GGDEF family protein;
n=2; Rhizobium|Rep: Putative sensory box/GGDEF family
protein - Rhizobium etli (strain CFN 42 / ATCC 51251)
Length = 839
Score = 33.1 bits (72), Expect = 9.3
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = -2
Query: 431 IWSDSNSILTGLSPRQYLRIISVHLNIQLTEGLA*SNRSPPKSIKSTSHCTARDKTSSKA 252
+W D+N + PR+ L L+ S + P +++ + C R K+ K
Sbjct: 5 LWPDANGLKRFQQPRRGLIFQRSREKAALSRE---SCAAQPVVLENLTKCLIRLKSIFKG 61
Query: 251 IKLSSPRTGSFSMKP 207
+ L SPRTG MKP
Sbjct: 62 LGLESPRTGKVWMKP 76
>UniRef50_A5VL00 Cluster: Metallophosphoesterase; n=2; Lactobacillus
reuteri|Rep: Metallophosphoesterase - Lactobacillus
reuteri F275
Length = 394
Score = 33.1 bits (72), Expect = 9.3
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +1
Query: 244 SFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 345
+F AF++++ A+ VD IL+ GD++D+ + S+
Sbjct: 33 TFTAFQKIVDDAIALKVDFILISGDIYDRDQQSI 66
>UniRef50_A5KQM8 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 386
Score = 33.1 bits (72), Expect = 9.3
Identities = 18/83 (21%), Positives = 39/83 (46%)
Frame = +1
Query: 175 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 354
++ + SD+H+G ED EEV+ + D +++ GD++D++ PS +
Sbjct: 1 MKFIHLSDLHIGKHLYHYNMKEDQEHILEEVIGYTEKLRPDAVVIAGDIYDKSVPSAEAV 60
Query: 355 FKCTEIIRKYCLGDKPVSIELLS 423
+ + + VSI +++
Sbjct: 61 AVFDDFLTRLSSVSPQVSILIIA 83
>UniRef50_A3S327 Cluster: Possible general (Type II) secretion
pathway protein D; n=1; Prochlorococcus marinus str. MIT
9211|Rep: Possible general (Type II) secretion pathway
protein D - Prochlorococcus marinus str. MIT 9211
Length = 560
Score = 33.1 bits (72), Expect = 9.3
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +2
Query: 506 GNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKD 685
G P+G +V + I S G V+ G T T V+ SP+ L+R+A YG H+KD
Sbjct: 55 GPQAPPLGGMAVGEIFINS-RGFVDLEGPKTTITLVKASPIDSLLTLSRIANYGFLHVKD 113
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 810,740,978
Number of Sequences: 1657284
Number of extensions: 16026230
Number of successful extensions: 37362
Number of sequences better than 10.0: 135
Number of HSP's better than 10.0 without gapping: 35961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37282
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76652910257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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