Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_I04
         (864 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73978-2|CAA98292.2|  728|Caenorhabditis elegans Hypothetical pr...   143   1e-34
Z72511-9|CAA96661.2|  223|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AL132952-1|CAB61134.2|  214|Caenorhabditis elegans Hypothetical ...    29   5.7  
Z66520-9|CAA91390.2|  335|Caenorhabditis elegans Hypothetical pr...    28   9.9  
Z66520-4|CAE48504.1|  174|Caenorhabditis elegans Hypothetical pr...    28   9.9  
U00031-9|AAK18871.1|  470|Caenorhabditis elegans Hypothetical pr...    28   9.9  

>Z73978-2|CAA98292.2|  728|Caenorhabditis elegans Hypothetical
           protein ZC302.1 protein.
          Length = 728

 Score =  143 bits (347), Expect = 1e-34
 Identities = 69/141 (48%), Positives = 92/141 (65%), Gaps = 5/141 (3%)
 Frame = +2

Query: 452 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVL 631
           VNY D NLN+  PI +IHGNHDD  G+G +++LD+L  +GLVN FGK ++     +SP+L
Sbjct: 162 VNYYDQNLNVGLPIFTIHGNHDDLSGKG-LTALDLLHESGLVNLFGKHSNIQEFIVSPIL 220

Query: 632 LQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDE-TLDWFNLFVLHQNH----ADRG 796
           L+KG TRLALYG+   +D RL R F    +   RP+    DWFNLFVLHQN       R 
Sbjct: 221 LRKGETRLALYGIGSQRDDRLVRAFKNNSISFLRPNAGAEDWFNLFVLHQNRPRRAMHRS 280

Query: 797 HSNYIPEGVLXNFLDLVVWGH 859
             N++PE ++  F DL++WGH
Sbjct: 281 TGNFLPESLIPQFFDLLIWGH 301



 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 41/93 (44%), Positives = 61/93 (65%)
 Frame = +1

Query: 166 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 345
           +D ++IL+A+DIH G+ EN      D+   FEEVL +A +  VD+ILLGGDLF +  PS 
Sbjct: 63  EDIIKILVATDIHCGYGENKANIHMDAVNTFEEVLQIATEQKVDMILLGGDLFHENNPSR 122

Query: 346 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFS 444
               + T+++R+YCL   P+++E LSD   NF+
Sbjct: 123 EVQHRVTQLLRQYCLNGNPIALEFLSDASVNFN 155


>Z72511-9|CAA96661.2|  223|Caenorhabditis elegans Hypothetical
           protein F55A11.8 protein.
          Length = 223

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +1

Query: 250 IAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 351
           +AFEEVL++    +VD  + G D+F+ A   V+C
Sbjct: 69  VAFEEVLTVQELNEVDAFIYGDDMFEYA--DVHC 100


>AL132952-1|CAB61134.2|  214|Caenorhabditis elegans Hypothetical
           protein Y51H4A.1 protein.
          Length = 214

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = -2

Query: 359 LNIQLTEGLA*SNRSPPKSIKSTSHCTARDKTSSKAIKLS--SPRTGSFSM 213
           + I++ E    + ++P  S KSTS C + +  S ++I+ S  SPR  SF +
Sbjct: 88  IQIKVPEVEEDTEKTPAGSPKSTSSCISSEILSEQSIEFSSISPRPSSFPL 138


>Z66520-9|CAA91390.2|  335|Caenorhabditis elegans Hypothetical
           protein F49E12.5a protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 148 CRSQSLFYLYNSIMMLSQTTLNTIMPI 68
           C S+SL  LY S   +  T+ N I+PI
Sbjct: 11  CASESLLELYRSYKYILSTSFNIIIPI 37


>Z66520-4|CAE48504.1|  174|Caenorhabditis elegans Hypothetical
           protein F49E12.5b protein.
          Length = 174

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 148 CRSQSLFYLYNSIMMLSQTTLNTIMPI 68
           C S+SL  LY S   +  T+ N I+PI
Sbjct: 26  CASESLLELYRSYKYILSTSFNIIIPI 52


>U00031-9|AAK18871.1|  470|Caenorhabditis elegans Hypothetical
           protein B0361.8 protein.
          Length = 470

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +2

Query: 437 IFQXTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSL 550
           I+Q  V YED  + +S  ++SIH  H++  G   V ++
Sbjct: 350 IWQLNVPYEDLVVELSKALISIHTMHNEHFGISVVEAM 387


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,876,782
Number of Sequences: 27780
Number of extensions: 389588
Number of successful extensions: 921
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)