Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_H24
(918 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 164 2e-39
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 157 5e-37
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 142 1e-32
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 136 6e-31
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 136 6e-31
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 135 1e-30
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 134 3e-30
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 128 1e-28
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 128 2e-28
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 122 2e-26
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 117 4e-25
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 117 4e-25
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 117 4e-25
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 116 8e-25
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 116 8e-25
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 108 2e-22
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 107 3e-22
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 107 3e-22
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 104 4e-21
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 103 5e-21
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 103 6e-21
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 103 6e-21
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 102 1e-20
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 97 6e-19
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 96 1e-18
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 95 3e-18
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 87 4e-16
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 87 4e-16
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 87 4e-16
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 87 4e-16
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 87 8e-16
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 82 2e-14
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 80 7e-14
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 79 2e-13
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 77 6e-13
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 76 1e-12
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 73 1e-11
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 72 2e-11
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 72 2e-11
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 71 6e-11
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 67 5e-10
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 65 2e-09
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 62 2e-08
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 58 2e-07
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 58 4e-07
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 55 3e-06
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 54 5e-06
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 54 5e-06
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 53 9e-06
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 52 2e-05
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 50 6e-05
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 50 6e-05
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 50 8e-05
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 50 1e-04
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 49 1e-04
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 49 2e-04
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 48 4e-04
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 47 6e-04
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 47 6e-04
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 45 0.002
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 44 0.004
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 44 0.007
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 43 0.010
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 43 0.010
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 43 0.010
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 43 0.010
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 43 0.013
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 42 0.017
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 42 0.029
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 40 0.067
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 40 0.089
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 40 0.089
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 40 0.089
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 40 0.12
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 40 0.12
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 39 0.21
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 38 0.27
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 38 0.27
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 38 0.27
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 38 0.36
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 38 0.36
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 37 0.63
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 37 0.83
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 36 1.1
UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2; Ya... 36 1.1
UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=... 36 1.4
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 35 2.5
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 35 2.5
UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|R... 34 5.9
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 33 7.7
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 164 bits (399), Expect = 2e-39
Identities = 85/141 (60%), Positives = 98/141 (69%)
Frame = -3
Query: 508 DEIPAKCSEXIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILF 329
+E PAKC+E I STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+LF
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 328 IRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SSPINDPGFPNSAR 149
IRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S PI PG PNSAR
Sbjct: 138 IRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSFPIKLPGCPNSAR 196
Query: 148 IKSLKDVPIIPDQIPKIKYNV 86
IKSL DVP +P PK+KYNV
Sbjct: 197 IKSLSDVPTMPAHAPKMKYNV 217
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 157 bits (380), Expect = 5e-37
Identities = 84/145 (57%), Positives = 88/145 (60%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 239
YSTNHKDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 5 YSTNHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIF 64
Query: 240 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 419
N LVPL+LGAPD+AFPR+NN+ F IVENGAGTG T
Sbjct: 65 FMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWT 124
Query: 420 VYPPLSSNIAHRGRSVDLAIXSLHL 494
VYPPLSSNIAH G SVDLAI SLHL
Sbjct: 125 VYPPLSSNIAHGGSSVDLAIFSLHL 149
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 142 bits (343), Expect = 1e-32
Identities = 75/145 (51%), Positives = 85/145 (58%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 239
+STNHKDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 9 FSTNHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIF 68
Query: 240 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 419
N LVPL++GAPD+AFPR+NN+ F VE GAGTG T
Sbjct: 69 FMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWT 128
Query: 420 VYPPLSSNIAHRGRSVDLAIXSLHL 494
VYPPL+ N+AH G SVDLAI SLHL
Sbjct: 129 VYPPLAGNLAHAGASVDLAIFSLHL 153
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 136 bits (330), Expect = 6e-31
Identities = 72/145 (49%), Positives = 82/145 (56%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 239
+STNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIF 67
Query: 240 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 419
N LVPL++GAPD+AFPR+NN+ F VE GAGTG T
Sbjct: 68 FMVMPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWT 127
Query: 420 VYPPLSSNIAHRGRSVDLAIXSLHL 494
VYPPL+ N+AH G SVDL I SLHL
Sbjct: 128 VYPPLAGNLAHAGASVDLTIFSLHL 152
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 136 bits (330), Expect = 6e-31
Identities = 72/145 (49%), Positives = 82/145 (56%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 239
+STNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIF 67
Query: 240 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 419
N LVPL++GAPD+AFPR+NN+ F VE GAGTG T
Sbjct: 68 FMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWT 127
Query: 420 VYPPLSSNIAHRGRSVDLAIXSLHL 494
VYPPL+ N+AH G SVDL I SLHL
Sbjct: 128 VYPPLAGNLAHAGASVDLTIFSLHL 152
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 135 bits (327), Expect = 1e-30
Identities = 70/113 (61%), Positives = 75/113 (66%)
Frame = +3
Query: 156 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 335
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 336 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLHL 494
+ F IVENGAGTG TVYPPLSSNIAH G SVDLAI SLHL
Sbjct: 73 MSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHL 125
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 134 bits (324), Expect = 3e-30
Identities = 70/145 (48%), Positives = 82/145 (56%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 239
+STNHKDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 8 FSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIF 67
Query: 240 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 419
N LVPL++GAPD+AFPR+NN+ F +VE GAGTG T
Sbjct: 68 FMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWT 127
Query: 420 VYPPLSSNIAHRGRSVDLAIXSLHL 494
VYPPL+ N +H G SVDL I SLHL
Sbjct: 128 VYPPLAGNYSHPGASVDLTIFSLHL 152
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 128 bits (310), Expect = 1e-28
Identities = 67/141 (47%), Positives = 78/141 (55%)
Frame = +3
Query: 72 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 251
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 252 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 431
N L+PL++GAPD+AFPR+NN+ F +E GAGTG TVYPP
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPP 120
Query: 432 LSSNIAHRGRSVDLAIXSLHL 494
L+ N+AH G SVDL I SLHL
Sbjct: 121 LAGNLAHAGASVDLTIFSLHL 141
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 128 bits (309), Expect = 2e-28
Identities = 67/145 (46%), Positives = 80/145 (55%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 239
+S NHKDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 9 FSCNHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIF 68
Query: 240 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 419
N VPL++GAPD+AFPR+NNI F +VE GAGTG T
Sbjct: 69 FLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWT 128
Query: 420 VYPPLSSNIAHRGRSVDLAIXSLHL 494
VYPPL+S AH G SVD+AI SLHL
Sbjct: 129 VYPPLASIQAHSGGSVDMAIFSLHL 153
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 122 bits (293), Expect = 2e-26
Identities = 62/113 (54%), Positives = 70/113 (61%)
Frame = +3
Query: 156 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 335
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 336 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLHL 494
+ F VE+GAGTG TVYPPLS N AH G SVDLAI SLHL
Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHL 135
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 117 bits (282), Expect = 4e-25
Identities = 68/147 (46%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 233
YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 6 YSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVM 65
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N LVP+++GAPD+AFPR+NNI F VE GAGTG
Sbjct: 66 IFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTG 125
Query: 414 *TVYPPLSSNIAHRGRSVDLAIXSLHL 494
TVYPPLS +H G SVDLAI SLHL
Sbjct: 126 WTVYPPLSGLQSHSGGSVDLAIFSLHL 152
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 117 bits (282), Expect = 4e-25
Identities = 68/147 (46%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 233
YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 6 YSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVM 65
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N LVP+++GAPD+AFPR+NNI F VE GAGTG
Sbjct: 66 IFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTG 125
Query: 414 *TVYPPLSSNIAHRGRSVDLAIXSLHL 494
TVYPPLS +H G SVDLAI SLHL
Sbjct: 126 WTVYPPLSGLQSHSGGSVDLAIFSLHL 152
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 117 bits (282), Expect = 4e-25
Identities = 68/147 (46%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 233
YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 6 YSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVM 65
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N LVP+++GAPD+AFPR+NNI F VE GAGTG
Sbjct: 66 IFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTG 125
Query: 414 *TVYPPLSSNIAHRGRSVDLAIXSLHL 494
TVYPPLS +H G SVDLAI SLHL
Sbjct: 126 WTVYPPLSGLQSHSGGSVDLAIFSLHL 152
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 116 bits (279), Expect = 8e-25
Identities = 63/147 (42%), Positives = 79/147 (53%), Gaps = 2/147 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 233
+STNHKDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 14 FSTNHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLM 73
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N LVP+++G+PD+AFPR+NNI F +VE G GTG
Sbjct: 74 IFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTG 133
Query: 414 *TVYPPLSSNIAHRGRSVDLAIXSLHL 494
TVYPPLSS +H G +VDLAI SLH+
Sbjct: 134 WTVYPPLSSIQSHSGGAVDLAIFSLHI 160
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 116 bits (279), Expect = 8e-25
Identities = 63/147 (42%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXX 233
+STNHKDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 9 FSTNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLM 68
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N VP+++GAPD+AFPR+NNI F +VE G+GTG
Sbjct: 69 IFFMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTG 128
Query: 414 *TVYPPLSSNIAHRGRSVDLAIXSLHL 494
TVYPPLS +H G +VDLAI SLHL
Sbjct: 129 WTVYPPLSGITSHSGGAVDLAIFSLHL 155
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 108 bits (259), Expect = 2e-22
Identities = 55/113 (48%), Positives = 67/113 (59%)
Frame = +3
Query: 156 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 335
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 336 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLHL 494
+ F + G GTG TVYPPLS + H G SVDL I SLHL
Sbjct: 84 MSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHL 136
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 107 bits (258), Expect = 3e-22
Identities = 64/147 (43%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 233
YSTN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 7 YSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLM 66
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N L+PL++GA D AFPRINNI F +VE+GAGTG
Sbjct: 67 IFFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTG 126
Query: 414 *TVYPPLSSNIAHRGRSVDLAIXSLHL 494
TVYPPLSS AH G SVDLAI +LHL
Sbjct: 127 WTVYPPLSSIQAHSGPSVDLAIFALHL 153
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 107 bits (258), Expect = 3e-22
Identities = 64/147 (43%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 233
YSTN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 7 YSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLM 66
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N L+PL++GA D AFPRINNI F +VE+GAGTG
Sbjct: 67 IFFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTG 126
Query: 414 *TVYPPLSSNIAHRGRSVDLAIXSLHL 494
TVYPPLSS AH G SVDLAI +LHL
Sbjct: 127 WTVYPPLSSIQAHSGPSVDLAIFALHL 153
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 104 bits (249), Expect = 4e-21
Identities = 61/147 (41%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 233
YSTN KDI +Y EL PGS L G+ Q++N +V HA
Sbjct: 7 YSTNAKDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLM 66
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N ++PL++GA D++FPRIN+I F +VE+GAGTG
Sbjct: 67 IFFLAMPALIGGFGNYMLPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTG 126
Query: 414 *TVYPPLSSNIAHRGRSVDLAIXSLHL 494
TVYPPLSS AH G SVDLAI SLHL
Sbjct: 127 WTVYPPLSSIQAHSGPSVDLAIFSLHL 153
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 103 bits (248), Expect = 5e-21
Identities = 61/149 (40%), Positives = 75/149 (50%), Gaps = 5/149 (3%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 239
STN KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 37 STNAKDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIF 96
Query: 240 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 419
N L+PL++G PD+AFPR+NNI F I+E G GTG T
Sbjct: 97 FMVMPALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWT 156
Query: 420 V----YPPLSSNIAHRGRSVDLAIXSLHL 494
+ YPPLS +H G SVDLAI +LHL
Sbjct: 157 LLKDKYPPLSGLQSHSGPSVDLAIFALHL 185
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 103 bits (247), Expect = 6e-21
Identities = 60/147 (40%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 233
YSTN KDI LY EL PG L G++Q++N +V HA
Sbjct: 7 YSTNAKDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILM 66
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N ++PL++GA D AFPRINNI F +VE+GAGTG
Sbjct: 67 IFFMVMPALIGGFGNYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTG 126
Query: 414 *TVYPPLSSNIAHRGRSVDLAIXSLHL 494
TVYPPL+S AH G SVDLAI +LH+
Sbjct: 127 WTVYPPLASIQAHSGPSVDLAIFALHM 153
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 103 bits (247), Expect = 6e-21
Identities = 59/145 (40%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 239
S+N KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 9 SSNAKDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIF 68
Query: 240 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 419
N L+PL LG PD+ FPR+NNI + +ENG GTG T
Sbjct: 69 FMVMPALIGGFGNFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWT 128
Query: 420 VYPPLSSNIAHRGRSVDLAIXSLHL 494
+YPPLS +H G SVDLAI LHL
Sbjct: 129 LYPPLSGIQSHSGPSVDLAIFGLHL 153
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 102 bits (245), Expect = 1e-20
Identities = 59/125 (47%), Positives = 67/125 (53%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 242
STNHKD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 10 STNHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFX 69
Query: 243 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 422
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TV
Sbjct: 70 MXMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTV 129
Query: 423 YPPLS 437
YPPL+
Sbjct: 130 YPPLA 134
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 97.1 bits (231), Expect = 6e-19
Identities = 52/145 (35%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 239
S+N KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 35 SSNAKDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIF 94
Query: 240 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 419
N L+P+++G PD+AFPR+NN+ + I+ENG GTG T
Sbjct: 95 FMVMPALIGGFGNFLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWT 154
Query: 420 VYPPLSSNIAHRGRSVDLAIXSLHL 494
+YPPLS +H VDL I LHL
Sbjct: 155 LYPPLSGIQSHSSMGVDLGIFGLHL 179
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 96.3 bits (229), Expect = 1e-18
Identities = 59/147 (40%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 233
+STN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 12 FSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILM 71
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N L+PL+LGA D+AF R+NNI F +VE GAGTG
Sbjct: 72 IFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTG 131
Query: 414 *TVYPPLSSNIAHRGRSVDLAIXSLHL 494
TVY PL+ +H G +VDLAI SLHL
Sbjct: 132 WTVYFPLAGIQSHSGPAVDLAIFSLHL 158
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 94.7 bits (225), Expect = 3e-18
Identities = 55/147 (37%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 233
++TNHK IG LY EL PG L G+ YN I T H
Sbjct: 10 FTTNHKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLM 69
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N VP+++GAPD++FPR+NN F E G GTG
Sbjct: 70 LFVVVMPILFGGFGNYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTG 129
Query: 414 *TVYPPLSSNIAHRGRSVDLAIXSLHL 494
TVYPPLSS +H G SVDL I S HL
Sbjct: 130 WTVYPPLSSLQSHSGASVDLMIFSFHL 156
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 87.4 bits (207), Expect = 4e-16
Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXXX 233
+STN ++I LY EL NP L+ + Q++N ++TAHA
Sbjct: 24 FSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFM 83
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N LVPL +G+ D AFPRINN+ F +++ G G+G
Sbjct: 84 VFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSG 143
Query: 414 *TVYPPLSSNIAHRGRSVDLAIXSLHL 494
T+YPPL+S +H G S+D+AI +LHL
Sbjct: 144 WTLYPPLTSLQSHSGSSIDMAIFALHL 170
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 87.4 bits (207), Expect = 4e-16
Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXXX 233
+STN ++I LY EL NP L+ + Q++N ++TAHA
Sbjct: 24 FSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFM 83
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N LVPL +G+ D AFPRINN+ F +++ G G+G
Sbjct: 84 VFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSG 143
Query: 414 *TVYPPLSSNIAHRGRSVDLAIXSLHL 494
T+YPPL+S +H G S+D+AI +LHL
Sbjct: 144 WTLYPPLTSLQSHSGSSIDMAIFALHL 170
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 87.4 bits (207), Expect = 4e-16
Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXXX 233
+STN ++I LY EL NP L+ + Q++N ++TAHA
Sbjct: 24 FSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFM 83
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N LVPL +G+ D AFPRINN+ F +++ G G+G
Sbjct: 84 VFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSG 143
Query: 414 *TVYPPLSSNIAHRGRSVDLAIXSLHL 494
T+YPPL+S +H G S+D+AI +LHL
Sbjct: 144 WTLYPPLTSLQSHSGSSIDMAIFALHL 170
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 87.4 bits (207), Expect = 4e-16
Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXXX 233
+STN ++I LY EL NP L+ + Q++N ++TAHA
Sbjct: 24 FSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFM 83
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N LVPL +G+ D AFPRINN+ F +++ G G+G
Sbjct: 84 VFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSG 143
Query: 414 *TVYPPLSSNIAHRGRSVDLAIXSLHL 494
T+YPPL+S +H G S+D+AI +LHL
Sbjct: 144 WTLYPPLTSLQSHSGSSIDMAIFALHL 170
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 86.6 bits (205), Expect = 8e-16
Identities = 54/131 (41%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 233
YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 6 YSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVM 65
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N LVP+++GAPD+AFPR+NNI F VE GAGTG
Sbjct: 66 IFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTG 125
Query: 414 *TVYPPLSSNI 446
TV LS I
Sbjct: 126 WTVKCKLSQII 136
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 81.8 bits (193), Expect = 2e-14
Identities = 45/123 (36%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXX 233
+STNHKDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 10 FSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLM 69
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N VP+++G+PD+AFPR+NNI F +VE G G+G
Sbjct: 70 IFFMVMPAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSG 129
Query: 414 *TV 422
TV
Sbjct: 130 WTV 132
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 80.2 bits (189), Expect = 7e-14
Identities = 60/164 (36%), Positives = 73/164 (44%), Gaps = 20/164 (12%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-------SLIGD------DQIY- 200
STNHKDIGTLY AEL PG + D DQ Y
Sbjct: 33 STNHKDIGTLYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYH 92
Query: 201 --NTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 374
N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALL 152
Query: 375 XXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLHL 494
V NGAGTG TVY PLS++ G +VD+AI SLH+
Sbjct: 153 LGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHI 195
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 78.6 bits (185), Expect = 2e-13
Identities = 39/65 (60%), Positives = 44/65 (67%)
Frame = +3
Query: 291 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 470
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 471 LAIXS 485
LAI S
Sbjct: 61 LAIYS 65
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 77.0 bits (181), Expect = 6e-13
Identities = 46/113 (40%), Positives = 55/113 (48%)
Frame = +3
Query: 156 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 335
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 336 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLHL 494
+ F + G + PL G SVDLAI LHL
Sbjct: 84 MSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHL 134
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 76.2 bits (179), Expect = 1e-12
Identities = 42/144 (29%), Positives = 63/144 (43%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 242
S NHKDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 11 SVNHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFF 70
Query: 243 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 422
N +PL++ D++ PR+NN+ + G G G T+
Sbjct: 71 FVMPTSIGGLGNWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTM 130
Query: 423 YPPLSSNIAHRGRSVDLAIXSLHL 494
YPPLS++ G +DLA+ SLH+
Sbjct: 131 YPPLSNSEFMDGLPIDLAVFSLHM 154
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 72.9 bits (171), Expect = 1e-11
Identities = 40/68 (58%), Positives = 43/68 (63%)
Frame = +3
Query: 291 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 470
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 471 LAIXSLHL 494
LAI SLH+
Sbjct: 64 LAIFSLHM 71
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 72.1 bits (169), Expect = 2e-11
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 153 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 326
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 327 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLHL 494
+NN+ + +++ GAG G T YPP+S+ R+VD AI ++H+
Sbjct: 203 LNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHV 258
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 71.7 bits (168), Expect = 2e-11
Identities = 47/131 (35%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 233
+STN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 12 FSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILM 71
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N L+PL+LGA D+AF R+NNI F +VE GAGTG
Sbjct: 72 IFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTG 131
Query: 414 *TVYPPLSSNI 446
TV SS +
Sbjct: 132 WTVKKICSSKM 142
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 70.5 bits (165), Expect = 6e-11
Identities = 43/145 (29%), Positives = 59/145 (40%), Gaps = 2/145 (1%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXX 236
+ NHK IGT Y EL +PG G Q+YN+++T H
Sbjct: 18 TVNHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMI 77
Query: 237 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 416
N ++PL+LGAP++AFPR+N + F + G G+
Sbjct: 78 FFLVMPILIGGFGNWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSW 137
Query: 417 TVYPPLSSNIAHRGRSVDLAIXSLH 491
T YPPLS S+D I LH
Sbjct: 138 TFYPPLSVE-GQPELSLDTMILGLH 161
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 67.3 bits (157), Expect = 5e-10
Identities = 42/123 (34%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 233
YSTN KDI LY EL PG+ L G+ Q++N +V HA
Sbjct: 7 YSTNAKDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLM 66
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N L+PL++GA D++F R+NNI F +VE+GAGTG
Sbjct: 67 IFFLVMPALIGGFGNYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTG 126
Query: 414 *TV 422
TV
Sbjct: 127 WTV 129
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 65.3 bits (152), Expect = 2e-09
Identities = 40/146 (27%), Positives = 56/146 (38%), Gaps = 2/146 (1%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXXXX 236
S +HK IG Y EL G L GD Q YN ++T+H
Sbjct: 10 SVSHKMIGLCYLLVAILSGFVGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMV 69
Query: 237 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 416
N +P++ G PD+ FPR+NN+ F + E G G G
Sbjct: 70 FAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGW 129
Query: 417 TVYPPLSSNIAHRGRSVDLAIXSLHL 494
T+YP L H + D + ++HL
Sbjct: 130 TLYPTLICIDFHSSLACDFVMFAVHL 155
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 62.1 bits (144), Expect = 2e-08
Identities = 57/142 (40%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Frame = +3
Query: 72 HKDIGTL-YXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 248
HKD GTL + L G +IG QI VTA A
Sbjct: 1 HKDXGTLXFXFXXWSAXFXGXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFV 60
Query: 249 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 428
L PL +GAP +A PR+ N+ F + G G VYP
Sbjct: 61 MPTLXGGFGXXLXPLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYP 120
Query: 429 PLSSNIAHRGRSVDLAIXSLHL 494
P SS +AH +VDL I LHL
Sbjct: 121 PXSSGLAHSSGAVDLGIFXLHL 142
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 58.4 bits (135), Expect = 2e-07
Identities = 49/152 (32%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 242
+ +HKDIG LY EL +PG + + YN+++T+H
Sbjct: 91 TVDHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFL 150
Query: 243 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF--XXXXXXXXXXXXXXIVE-NGAGTG 413
N L+PL++GA D+AFPRIN I F I E A TG
Sbjct: 151 FATPIIAAFS-NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTG 209
Query: 414 *TVYPPLS-----SNIAHRGRSVDLAIXSLHL 494
T+Y PLS N A+ G VDL + LHL
Sbjct: 210 WTMYTPLSVGEGMGNQANAG--VDLMLLGLHL 239
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 57.6 bits (133), Expect = 4e-07
Identities = 49/167 (29%), Positives = 59/167 (35%)
Frame = +2
Query: 98 YFWYLIRNNWNIFKTFNSS*IRKSRIINWR*SNL*YYCNSACXXXXXXXXXXXXXWRIWK 277
Y WYL RN+ + KT + +R NL YC +C I K
Sbjct: 5 YLWYLSRNSSDCPKTNCPPWTKTTRNSYRGRPNLQRYCYCSCLRYNFLYSNTYYNSGIRK 64
Query: 278 LXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*R 457
L P NK +KIL TPL Y N C K C + +NSLP Y T
Sbjct: 65 LNTPSNIGSTSHGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLG 124
Query: 458 KIRRSCYXLTTFSRYFINYRSNXFYXNNXXYTXXIIXHLINSPXICM 598
R + T N N Y NN Y N P +CM
Sbjct: 125 PFRSYNHFCPTSCSSVFNSSLNQLYYNNHQYARYSNNPWTN-PSVCM 170
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 54.8 bits (126), Expect = 3e-06
Identities = 41/145 (28%), Positives = 57/145 (39%), Gaps = 1/145 (0%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 242
+T+HKDIG LY +L P S Y VT H
Sbjct: 18 TTDHKDIGLLYLVTSIAFLLIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLW 77
Query: 243 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*T 419
N +VPL +GA D+AFPR+N + + E+GA G T
Sbjct: 78 FASPFAFGLA-NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWT 136
Query: 420 VYPPLSSNIAHRGRSVDLAIXSLHL 494
+Y PL++ I G +DLA ++ L
Sbjct: 137 LYAPLTARIYTPGIGLDLAALAIFL 161
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 54.0 bits (124), Expect = 5e-06
Identities = 41/145 (28%), Positives = 58/145 (40%), Gaps = 3/145 (2%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDD--QIYNTIVTAHAXXX 233
S NHK IG Y EL G +I D +IYN + T H
Sbjct: 14 SGNHKIIGISYLWLAYWFGMIGFYMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIM 73
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N L P++LG D+ +PR+N +E G+GTG
Sbjct: 74 VFFNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTG 133
Query: 414 *TVYPPLSSNIAHRGRSVDLAIXSL 488
T+YPPLS+++++ G +D I L
Sbjct: 134 WTLYPPLSTSLSNVG--IDFIIFGL 156
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 54.0 bits (124), Expect = 5e-06
Identities = 38/144 (26%), Positives = 57/144 (39%), Gaps = 4/144 (2%)
Frame = +3
Query: 69 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQI--YNTIVTAHAXXXXX 239
NHK +G Y EL + +I + + YN I T H
Sbjct: 13 NHKTLGLYYLWFSFLFGSYGFLLSVILRTELYSSSLRIIAQENVNLYNMIFTIHGIIMIF 72
Query: 240 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 419
N +P++ G+P++A+PRIN+I E G GTG T
Sbjct: 73 FNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWT 132
Query: 420 VYPPLSSNIAHRGR-SVDLAIXSL 488
+YPPLS+++ +VD+ I L
Sbjct: 133 LYPPLSTSLMSLSPVAVDVIIFGL 156
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 53.2 bits (122), Expect = 9e-06
Identities = 34/124 (27%), Positives = 49/124 (39%)
Frame = +3
Query: 69 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 248
+HK IG ++ EL PG I D YN + T H
Sbjct: 34 DHKRIGVMFLVATTISFALGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFM 93
Query: 249 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 428
N L+P+++GA D+AFP++N + F +V+ GA TG T Y
Sbjct: 94 IPAIPSGFGNFLLPIMIGAKDVAFPKLNLLSF-YVYLAGAVVALFGMVQGGADTGWTFYT 152
Query: 429 PLSS 440
P S+
Sbjct: 153 PYST 156
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 52.4 bits (120), Expect = 2e-05
Identities = 38/140 (27%), Positives = 54/140 (38%), Gaps = 1/140 (0%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 242
+T+HK +G +Y AEL PG ++ +N + T H
Sbjct: 35 TTDHKQLGIMYIIMSFSFFFLGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLL 94
Query: 243 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*T 419
N ++PL +GAPD+AFPR+N F + GA G T
Sbjct: 95 YGTPIVWGFA-NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWT 153
Query: 420 VYPPLSSNIAHRGRSVDLAI 479
+Y PLS I G D+ I
Sbjct: 154 MYSPLSDAIHSPGLGSDMWI 173
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 50.4 bits (115), Expect = 6e-05
Identities = 33/127 (25%), Positives = 47/127 (37%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 242
+ +HK +G +Y A+L P + D YN I T H
Sbjct: 50 TVDHKKLGIMYIISAVIMLFRGGVDGLMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIF 109
Query: 243 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 422
N +VPL +GA D+AFP +NN+ F ++ G T
Sbjct: 110 MAMPFLIGLI-NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTS 168
Query: 423 YPPLSSN 443
Y PL+SN
Sbjct: 169 YMPLASN 175
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 50.4 bits (115), Expect = 6e-05
Identities = 38/146 (26%), Positives = 57/146 (39%), Gaps = 2/146 (1%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 242
+ +HKDIG LY EL + +YN ++T+H
Sbjct: 65 TVDHKDIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFL 124
Query: 243 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG* 416
N +PL++ A D+AFPRIN I F ++ A T
Sbjct: 125 FGTPMIAAFG-NYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSW 183
Query: 417 TVYPPLSSNIAHRGRSVDLAIXSLHL 494
T+Y PLS ++ +VD+ + LHL
Sbjct: 184 TMYTPLSLQMS--SPAVDMMMLGLHL 207
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 50.0 bits (114), Expect = 8e-05
Identities = 37/150 (24%), Positives = 60/150 (40%), Gaps = 6/150 (4%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI----GDDQIYNTIVTAHAXX 230
+T+HK IG LY EL G I + IYN +T H
Sbjct: 15 TTSHKIIGILYGYMGYIAGILGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLI 74
Query: 231 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI-VENGAG 407
N L+P+++G +++ PR+N I F + +
Sbjct: 75 MLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPIS 134
Query: 408 TG*TVYPPLSSNIAHR-GRSVDLAIXSLHL 494
+G T+YPPLS+ A G ++DL++ +H+
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHV 164
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 49.6 bits (113), Expect = 1e-04
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +3
Query: 387 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIXSLHL 494
+VE G G G TVYPPL+S + H G SVD AI SLHL
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHL 47
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 49.2 bits (112), Expect = 1e-04
Identities = 40/144 (27%), Positives = 53/144 (36%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 242
S NH D+ LY +L P L D +YN VT H
Sbjct: 6 SVNHIDVSLLYFSLGIFSALLGMSFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMVFF 63
Query: 243 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 422
N L+P PD+ FPR+N + F ++ + A G T
Sbjct: 64 AAMPTAIGFFANLLIPYHCNLPDLLFPRMNALSF-----WLMPFSLSLLLFSMASAGWTF 118
Query: 423 YPPLSSNIAHRGRSVDLAIXSLHL 494
YPPLSS SV+ ++ SLHL
Sbjct: 119 YPPLSS----LSPSVEFSVFSLHL 138
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 48.8 bits (111), Expect = 2e-04
Identities = 33/127 (25%), Positives = 47/127 (37%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 242
+ +HK IG ++ EL PG I D YN T H
Sbjct: 39 TVDHKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFL 98
Query: 243 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 422
N ++PL+LGA D+AFPR+N + ++ G TG T
Sbjct: 99 FMIPAIPAVFGNFMLPLMLGAKDVAFPRLNLLSL-YIYLAGAVLALWGMLNGGLDTGWTF 157
Query: 423 YPPLSSN 443
Y P S++
Sbjct: 158 YTPYSAH 164
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 47.6 bits (108), Expect = 4e-04
Identities = 32/127 (25%), Positives = 46/127 (36%), Gaps = 1/127 (0%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDD-QIYNTIVTAHAXXXX 236
++T+HK +G LY EL G I DD +YNT + H
Sbjct: 10 FTTDHKRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMI 69
Query: 237 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 416
N +PL++GA D+AFPR+N + + +
Sbjct: 70 LAFQIPALTGFFANYFIPLMIGAKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMW 129
Query: 417 TVYPPLS 437
T YPP S
Sbjct: 130 TGYPPYS 136
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 47.2 bits (107), Expect = 6e-04
Identities = 28/92 (30%), Positives = 39/92 (42%)
Frame = +3
Query: 168 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 347
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 348 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 443
I N T T YPP S N
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN 93
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 47.2 bits (107), Expect = 6e-04
Identities = 29/98 (29%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Frame = +3
Query: 198 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 377
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 378 XXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIXSL 488
G AG G T Y PLS+N+ G L + ++
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAI 183
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 45.2 bits (102), Expect = 0.002
Identities = 34/126 (26%), Positives = 47/126 (37%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 242
+TNHKDIG LY EL + G+ + YN V+ H
Sbjct: 19 TTNHKDIGVLYLITALFFLVFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFW 78
Query: 243 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 422
N LVPL +GA D+AFPR+N + + G T+
Sbjct: 79 FISPFAFGFA-NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTM 137
Query: 423 YPPLSS 440
Y PL++
Sbjct: 138 YAPLNT 143
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 44.4 bits (100), Expect = 0.004
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +3
Query: 192 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 371
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 372 XXXXXIVE-NGAGTG*TVYPPLS 437
+ +GA G T YPPLS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLS 168
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 43.6 bits (98), Expect = 0.007
Identities = 32/126 (25%), Positives = 44/126 (34%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 239
+ +HK IG Y EL P ++YN ++T H
Sbjct: 23 FCVDHKVIGIQYLVTSFLFFFIGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIF 82
Query: 240 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 419
N L+PL++G D+AFPR+N + F V G T
Sbjct: 83 LWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWT 140
Query: 420 VYPPLS 437
YPPLS
Sbjct: 141 SYPPLS 146
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 43.2 bits (97), Expect = 0.010
Identities = 32/127 (25%), Positives = 47/127 (37%), Gaps = 1/127 (0%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 239
++T+ K IG Y EL P + + D +YN + T H
Sbjct: 32 FNTDAKVIGIQYIATAMLFLLVGGLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLF 91
Query: 240 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG* 416
N L+P ++GAPD+AFP++N F G A +G
Sbjct: 92 LFLFPILNGFN-NLLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGW 150
Query: 417 TVYPPLS 437
YPP+S
Sbjct: 151 WSYPPMS 157
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 43.2 bits (97), Expect = 0.010
Identities = 33/140 (23%), Positives = 49/140 (35%)
Frame = +3
Query: 69 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 248
+HK IG +Y +L P + +++N + T H
Sbjct: 31 DHKRIGIMYILTAVFYLAVGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVG 90
Query: 249 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 428
N VPL++GA D+AFPR+N+ F + + G Y
Sbjct: 91 MPVLTGFA-NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYV 149
Query: 429 PLSSNIAHRGRSVDLAIXSL 488
PLSS + VD I L
Sbjct: 150 PLSSKAYSSLQGVDYWIIGL 169
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 43.2 bits (97), Expect = 0.010
Identities = 34/144 (23%), Positives = 49/144 (34%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 242
+T+HK IG +Y +LG P + +YN + T H
Sbjct: 28 TTDHKRIGIMYLVSAFVFFLIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFL 87
Query: 243 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 422
N +VPL++GA D+AFPR+N + V G
Sbjct: 88 GLMPLNVGLG-NYMVPLMIGARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFA 146
Query: 423 YPPLSSNIAHRGRSVDLAIXSLHL 494
Y PL+ VD I + L
Sbjct: 147 YAPLTQKQFAPTAGVDYWIVGIGL 170
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 43.2 bits (97), Expect = 0.010
Identities = 31/127 (24%), Positives = 44/127 (34%), Gaps = 1/127 (0%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 242
+ +HK IG +Y +L P + + YN I+T H
Sbjct: 21 TVDHKKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFF 80
Query: 243 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*T 419
N +VPL+LGA D+A PR+N + GA G T
Sbjct: 81 FIIQAGLTGFGNFVVPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWT 140
Query: 420 VYPPLSS 440
Y P S+
Sbjct: 141 FYYPFSA 147
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 42.7 bits (96), Expect = 0.013
Identities = 37/144 (25%), Positives = 50/144 (34%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 242
S +HK IG LY L +P + +YN +VT H
Sbjct: 107 SLDHKRIGLLYFVFGLWGGFIGLGLSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFF 166
Query: 243 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 422
N +P+ L D+ PR+N++ G G G T+
Sbjct: 167 FLMPILIGGFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYMELSLYY--GCGIGWTL 224
Query: 423 YPPLSSNIAHRGRSVDLAIXSLHL 494
YPPLS G VD + SLHL
Sbjct: 225 YPPLSI-WEGSGFGVDYLMFSLHL 247
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 42.3 bits (95), Expect = 0.017
Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 2/97 (2%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXX 233
Y+ NHK I Y EL +P S GD Y +VTAH
Sbjct: 56 YTINHKRIAINYLYFSMVTGLSGAALATMIRMELAHPESPFFKGDSLRYLQVVTAHGLIM 115
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 344
N L+P +G+ D+A+PR+N+I F
Sbjct: 116 VFFVVVPILFGGFANFLIPYHVGSKDVAYPRLNSIGF 152
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 41.5 bits (93), Expect = 0.029
Identities = 31/136 (22%), Positives = 48/136 (35%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 242
+ NH D+G ++ A+L P S + YN + T H
Sbjct: 26 TVNHTDLGRMFLTVAVFFFVVGGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFL 85
Query: 243 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 422
L+P +LG+ D+AFPR+ F + +G +
Sbjct: 86 FAIPVFEGFAVY-LLPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFM 144
Query: 423 YPPLSSNIAHRGRSVD 470
YPPLSS + G + D
Sbjct: 145 YPPLSSTLGAPGINSD 160
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 40.3 bits (90), Expect = 0.067
Identities = 32/135 (23%), Positives = 43/135 (31%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 242
+T+HK IG LY +L P + YN ++T HA
Sbjct: 29 TTDHKKIGLLYIIVSILGFCLGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFF 88
Query: 243 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 422
N +PL LG D+A PR+N G T
Sbjct: 89 FLIPLGLFGFGNYFLPLQLGVRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTF 148
Query: 423 YPPLSSNIAHRGRSV 467
Y PL+ + G SV
Sbjct: 149 YYPLTMDGNQTGVSV 163
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 39.9 bits (89), Expect = 0.089
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 276 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSS 440
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST 141
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 39.9 bits (89), Expect = 0.089
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHAXXXX 236
+ST+H D+G LY AEL PG+ I D +N + T H
Sbjct: 16 FSTHHTDVGLLYLISSLGFLFLGGALALLIRAELFFPGTQFIADSMTFNRMFTVHGTTLI 75
Query: 237 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 344
N VP+++ D+A+P++N I F
Sbjct: 76 FLFILPFASAVG-NYFVPIMVRYKDMAYPKLNAIAF 110
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 39.9 bits (89), Expect = 0.089
Identities = 26/73 (35%), Positives = 33/73 (45%)
Frame = +3
Query: 276 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 455
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 456 GRSVDLAIXSLHL 494
G VD I +L L
Sbjct: 184 GVGVDYYIWALQL 196
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 39.5 bits (88), Expect = 0.12
Identities = 39/147 (26%), Positives = 53/147 (36%), Gaps = 3/147 (2%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNP-GSLIG--DDQIYNTIVTAHAXXX 233
S +HK IG +Y +L G G + Y+ I TAH
Sbjct: 52 SVDHKKIGVMYIIVAMIMLLRGFADALMMRTQLAMATGGAHGVFPPEHYDQIFTAHGVIM 111
Query: 234 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 413
N +VPL +GA D+AFP +N++ F V N A TG
Sbjct: 112 IIFMAMPFMTGLM-NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTG 170
Query: 414 *TVYPPLSSNIAHRGRSVDLAIXSLHL 494
YPPL+ VD I +L +
Sbjct: 171 WVAYPPLAELGFSPDVGVDYYIWALQI 197
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 39.5 bits (88), Expect = 0.12
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
Frame = +3
Query: 156 ELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 332
+LG PG+ D Y +T H N L+PL++GA D+ FP +N
Sbjct: 66 QLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARDMVFPYVN 125
Query: 333 NIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP 431
+ + V G G G T+YPP
Sbjct: 126 MLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPP 159
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 38.7 bits (86), Expect = 0.21
Identities = 35/138 (25%), Positives = 47/138 (34%), Gaps = 1/138 (0%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHAXXXXX 239
+ +HK IG Y +L P + IG D+ YN I T H
Sbjct: 26 TVDHKIIGRRYTVTAFVFLALGGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMF 84
Query: 240 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 419
LVPL++G IAFPR+N + V+ G G
Sbjct: 85 LFAVPVMQAMAIY-LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWF 143
Query: 420 VYPPLSSNIAHRGRSVDL 473
Y PLS G+ D+
Sbjct: 144 AYVPLSGPQYAAGKRADI 161
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 38.3 bits (85), Expect = 0.27
Identities = 23/90 (25%), Positives = 36/90 (40%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 242
+ +HK IG +Y +L PG + + +N + T HA
Sbjct: 26 TVDHKRIGIMYGVTGFFFFLVGGLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMIFL 85
Query: 243 XXXXXXXXXXXN*LVPLILGAPDIAFPRIN 332
N +PL++GA D+AFPR+N
Sbjct: 86 GVMPLLSAFM-NYFLPLMIGARDVAFPRLN 114
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 38.3 bits (85), Expect = 0.27
Identities = 28/136 (20%), Positives = 49/136 (36%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 242
+ NH D+G ++ A+L +P S + Y + T H
Sbjct: 26 TVNHTDLGRMFLGASVVFFLIGGILAMLIRAQLASPRSAFVGAETYAQLFTMHGTIMMFL 85
Query: 243 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 422
L+P +LG+ D+A+PR++ F + +G +
Sbjct: 86 FAIPMFEGLTIY-LLPKMLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFM 144
Query: 423 YPPLSSNIAHRGRSVD 470
YPPL+S + G + D
Sbjct: 145 YPPLASTLGSPGINSD 160
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 38.3 bits (85), Expect = 0.27
Identities = 31/144 (21%), Positives = 49/144 (34%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 242
+ +HK I LY +L P + Q YN ++T H
Sbjct: 21 TVDHKKIAILYLVAGGFFFLVGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFL 80
Query: 243 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 422
N +VPL +GA D++FP +N + F + G T
Sbjct: 81 AAMPLLFALM-NAVVPLQIGARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTS 139
Query: 423 YPPLSSNIAHRGRSVDLAIXSLHL 494
Y LS + +G +D + L +
Sbjct: 140 YASLS--LHSKGHGIDFFVLGLQI 161
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 37.9 bits (84), Expect = 0.36
Identities = 36/146 (24%), Positives = 54/146 (36%), Gaps = 2/146 (1%)
Frame = +3
Query: 63 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAE--LGNPGSLIGDDQIYNTIVTAHAXXXX 236
ST+HK IG +Y A+ +G G + D + + + H
Sbjct: 73 STDHKKIGIMYVVLALVMLTRAIAEAVLMRAQGAVGLGGGFLSSDH-FAQLFSTHGTIMI 131
Query: 237 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 416
N +VPL +GA D+AFP +N+I +V + G
Sbjct: 132 FFMAMPFLTGLI-NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGW 190
Query: 417 TVYPPLSSNIAHRGRSVDLAIXSLHL 494
YPP + + + G VD I SL L
Sbjct: 191 FGYPPYTETLYNPGIGVDYWIWSLTL 216
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 37.9 bits (84), Expect = 0.36
Identities = 21/82 (25%), Positives = 32/82 (39%)
Frame = +3
Query: 192 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 371
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 372 XXXXXIVENGAGTG*TVYPPLS 437
G G T YP L+
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLA 171
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 37.1 bits (82), Expect = 0.63
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 276 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 437
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLS 172
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha
(Liverwort)
Length = 802
Score = 36.7 bits (81), Expect = 0.83
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYN 203
+STNHKDIGTLY EL PG+ I G+ Q+YN
Sbjct: 10 FSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 36.3 bits (80), Expect = 1.1
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 429 PLSSNIAHRGRSVDLAIXSLHL 494
PL+S+IAH G SVD+AI SLHL
Sbjct: 72 PLASSIAHAGASVDMAIFSLHL 93
Score = 35.1 bits (77), Expect = 2.5
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 263 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 388
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2;
Yarrowia lipolytica|Rep: Cytochrome c oxidase subunit I
- Yarrowia lipolytica (Candida lipolytica)
Length = 399
Score = 36.3 bits (80), Expect = 1.1
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHA 224
+STN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 12 FSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHA 68
>UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=2;
Saccharomycetaceae|Rep: Putative COX1/OXI3 intron 2
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 854
Score = 35.9 bits (79), Expect = 1.4
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHA 224
YSTN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 7 YSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHA 63
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 35.1 bits (77), Expect = 2.5
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 53 MNLFYKS*RYWNIIFYFWYLIRNNWNIFKTFNS 151
M + KS YWNI+F+FWYLI ++ K NS
Sbjct: 339 MIILNKSQSYWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 35.1 bits (77), Expect = 2.5
Identities = 35/138 (25%), Positives = 49/138 (35%), Gaps = 11/138 (7%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG------SLIG----DDQIYNTI 209
++TNHK IG LY +L P S+ D YN +
Sbjct: 28 FTTNHKQIGLLYILTSLFFFIGGGVMALLMRVQLAIPRYDLVKYSIFSGRFLDALQYNQL 87
Query: 210 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 389
VT H L+PL +G+ D+ +PR+N + +
Sbjct: 88 VTIHGLTMLIWFLGPLGTGFGIY-LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFF 146
Query: 390 VENG-AGTG*TVYPPLSS 440
+ G TG TVY PLSS
Sbjct: 147 LPGGNLDTGWTVYEPLSS 164
>UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|Rep:
Maturase-like protein - Pellia epiphylla
Length = 843
Score = 33.9 bits (74), Expect = 5.9
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 60 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYN 203
+STNHKDIGT Y EL PG+ I G+ Q+YN
Sbjct: 10 FSTNHKDIGTPYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 33.5 bits (73), Expect = 7.7
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +3
Query: 282 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 461
L+PL++GA D+ FPR+ + + + G +Y PLS++ G
Sbjct: 124 LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGL 183
Query: 462 SVDLAIXSLHL 494
S D + + L
Sbjct: 184 SADFWLIGITL 194
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,644,909
Number of Sequences: 1657284
Number of extensions: 8526846
Number of successful extensions: 14247
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 13611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14139
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84031265255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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