Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_H20
         (922 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012670-1|AAT08476.1|  322|Drosophila melanogaster LP12114p pro...    48   2e-05
AY069537-1|AAL39682.3|  301|Drosophila melanogaster LD25772p pro...    48   2e-05
AE014296-2541|AAS64998.1|  301|Drosophila melanogaster CG12304-P...    48   2e-05
AE014296-2540|AAF49612.1|  334|Drosophila melanogaster CG12304-P...    36   0.078

>BT012670-1|AAT08476.1|  322|Drosophila melanogaster LP12114p
           protein.
          Length = 322

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 7/219 (3%)
 Frame = +1

Query: 130 MYVMKRIVDHDDKIELPKCMYHIKNPIDLTEEDEICLKINEKVLKFIKGPNNKMTELETR 309
           MY +K ++   D I+LP CMY +KN + L  +                   +    +  R
Sbjct: 22  MYELKTLLPQFD-IKLPTCMYPLKN-VSLAADSLASGSSTSASTSASTSSCDDTASVAAR 79

Query: 310 QDELLNKLEILYERIKTISSQCKLDNMSANIQSSNASKVESVITPEEVVLVLSPDSLPWY 489
           Q+++L +LE L  ++  I +   +   +    ++  +     +  ++VV+   P+ +P+ 
Sbjct: 80  QEKVLKQLEELKAQLGQIRAGLGVCGKTFQHTTAFQNGGLKEVPLQDVVINGHPNFIPYA 139

Query: 490 LNIILKKS-----NIPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSEN-PKVNLRLIFKAA 651
           L + LK +      I + T  H   +       + +A   K+  +   PK+++ LI+K  
Sbjct: 140 L-LALKNAWRNLYTIDVKTFTHSTMADIGPAAREFEANLAKVPVNPALPKISVTLIWKNC 198

Query: 652 ADSELKLS-ALSTPIXGNVNILRYLSLAVIXPYPYXKFP 765
             +E+  S  +  PI G VNI+RYL       Y Y   P
Sbjct: 199 EHTEMISSPTMYVPIYGEVNIIRYLGRVGPAEYRYEGSP 237


>AY069537-1|AAL39682.3|  301|Drosophila melanogaster LD25772p
           protein.
          Length = 301

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 7/219 (3%)
 Frame = +1

Query: 130 MYVMKRIVDHDDKIELPKCMYHIKNPIDLTEEDEICLKINEKVLKFIKGPNNKMTELETR 309
           MY +K ++   D I+LP CMY +KN + L  +                   +    +  R
Sbjct: 1   MYELKTLLPQFD-IKLPTCMYPLKN-VSLAADSLASGSSTSASTSASTSSCDDTASVAAR 58

Query: 310 QDELLNKLEILYERIKTISSQCKLDNMSANIQSSNASKVESVITPEEVVLVLSPDSLPWY 489
           Q+++L +LE L  ++  I +   +   +    ++  +     +  ++VV+   P+ +P+ 
Sbjct: 59  QEKVLKQLEELKAQLGQIRAGLGVCGKTFQHTTAFQNGGLKEVPLQDVVINGHPNFIPYA 118

Query: 490 LNIILKKS-----NIPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSEN-PKVNLRLIFKAA 651
           L + LK +      I + T  H   +       + +A   K+  +   PK+++ LI+K  
Sbjct: 119 L-LALKNAWRNLYTIDVKTFTHSTMADIGPAAREFEANLAKVPVNPALPKISVTLIWKNC 177

Query: 652 ADSELKLS-ALSTPIXGNVNILRYLSLAVIXPYPYXKFP 765
             +E+  S  +  PI G VNI+RYL       Y Y   P
Sbjct: 178 EHTEMISSPTMYVPIYGEVNIIRYLGRVGPAEYRYEGSP 216


>AE014296-2541|AAS64998.1|  301|Drosophila melanogaster CG12304-PB,
           isoform B protein.
          Length = 301

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 7/219 (3%)
 Frame = +1

Query: 130 MYVMKRIVDHDDKIELPKCMYHIKNPIDLTEEDEICLKINEKVLKFIKGPNNKMTELETR 309
           MY +K ++   D I+LP CMY +KN + L  +                   +    +  R
Sbjct: 1   MYELKTLLPQFD-IKLPTCMYPLKN-VSLAADSLASGSSTSASTSASTSSCDDTASVAAR 58

Query: 310 QDELLNKLEILYERIKTISSQCKLDNMSANIQSSNASKVESVITPEEVVLVLSPDSLPWY 489
           Q+++L +LE L  ++  I +   +   +    ++  +     +  ++VV+   P+ +P+ 
Sbjct: 59  QEKVLKQLEELKAQLGQIRAGLGVCGKTFQHTTAFQNGGLKEVPLQDVVINGHPNFIPYA 118

Query: 490 LNIILKKS-----NIPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSEN-PKVNLRLIFKAA 651
           L + LK +      I + T  H   +       + +A   K+  +   PK+++ LI+K  
Sbjct: 119 L-LALKNAWRNLYTIDVKTFTHSTMADIGPAAREFEANLAKVPVNPALPKISVTLIWKNC 177

Query: 652 ADSELKLS-ALSTPIXGNVNILRYLSLAVIXPYPYXKFP 765
             +E+  S  +  PI G VNI+RYL       Y Y   P
Sbjct: 178 EHTEMISSPTMYVPIYGEVNIIRYLGRVGPAEYRYEGSP 216


>AE014296-2540|AAF49612.1|  334|Drosophila melanogaster CG12304-PA,
           isoform A protein.
          Length = 334

 Score = 35.9 bits (79), Expect = 0.078
 Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 7/160 (4%)
 Frame = +1

Query: 307 RQDELLNKLEILYERIKTISSQCKLDNMSANIQSSNASKVESVITPEEVVLVLSPDSLPW 486
           RQ+++L +LE L  ++  I +   +   +    ++  +     +  ++VV+   P+ +P+
Sbjct: 91  RQEKVLKQLEELKAQLGQIRAGLGVCGKTFQHTTAFQNGGLKEVPLQDVVINGHPNFIPY 150

Query: 487 YLNIILKKS-----NIPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSEN-PKVNLRLIFKA 648
            L + LK +      I + T  H   +       + +A   K+  +   PK+++ LI+K 
Sbjct: 151 AL-LALKNAWRNLYTIDVKTFTHSTMADIGPAAREFEANLAKVPVNPALPKISVTLIWKN 209

Query: 649 AADSELKLS-ALSTPIXGNVNILRYLSLAVIXPYPYXKFP 765
              +E+  S  +  PI G VNI+RYL       Y Y   P
Sbjct: 210 CEHTEMISSPTMYVPIYGEVNIIRYLGRVGPAEYRYEGSP 249


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,561,402
Number of Sequences: 53049
Number of extensions: 600716
Number of successful extensions: 1576
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1573
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4525903863
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)