Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_H20
(922 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 32 0.50
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 32 0.50
AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical ... 31 0.88
AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage... 31 0.88
Z68296-3|CAB54197.2| 223|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical pr... 30 2.7
U41027-4|AAC48196.2| 455|Caenorhabditis elegans Hypothetical pr... 30 2.7
U41027-3|AAQ82846.1| 516|Caenorhabditis elegans Hypothetical pr... 30 2.7
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 29 3.5
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 29 3.5
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z22174-1|CAA80128.1| 732|Caenorhabditis elegans Hypothetical pr... 28 8.2
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 28 8.2
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 28 8.2
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 32.3 bits (70), Expect = 0.50
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = +1
Query: 118 W*IMMYVMKRIVDHDDKIELPKCM--YHIKNPIDLTEEDEICLKINEKVLKFIKGPNNKM 291
W +++Y K+ + + PK + + K P L E++ + + +++K L F+K +
Sbjct: 195 WPVLIYYSKK----SNSFDFPKIIHIFQSKKPSCLKEDEHMAVLVHDKTLAFMKPCYITV 250
Query: 292 TEL-ETRQDELLNKLEILYERIKTISSQCKLDNMSANIQSSNAS 420
++ ET EL ++E TI S+ K N +A+I S S
Sbjct: 251 SKTDETGDHELSFRIE------TTILSEAKKTNSAASIHRSGPS 288
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 32.3 bits (70), Expect = 0.50
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = +1
Query: 118 W*IMMYVMKRIVDHDDKIELPKCM--YHIKNPIDLTEEDEICLKINEKVLKFIKGPNNKM 291
W +++Y K+ + + PK + + K P L E++ + + +++K L F+K +
Sbjct: 195 WPVLIYYSKK----SNSFDFPKIIHIFQSKKPSCLKEDEHMAVLVHDKTLAFMKPCYITV 250
Query: 292 TEL-ETRQDELLNKLEILYERIKTISSQCKLDNMSANIQSSNAS 420
++ ET EL ++E TI S+ K N +A+I S S
Sbjct: 251 SKTDETGDHELSFRIE------TTILSEAKKTNSAASIHRSGPS 288
>AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical
protein Y39A1B.3 protein.
Length = 1499
Score = 31.5 bits (68), Expect = 0.88
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +1
Query: 208 IDLTEEDEICLKINEKVLKFIKGPNNKMTELETRQDELLNKLEILYE--RIKTISSQCKL 381
+ LT+ D+ L NE+ + NN++ +L + +L+NK+ I E R TI+ +C L
Sbjct: 653 VQLTQMDDDQLLENEQEAR---DRNNQIMQLRAQVQQLINKMSIEQELSRCVTIALRCVL 709
Query: 382 DNMSANIQ 405
+ +A I+
Sbjct: 710 NGETAEIK 717
>AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage
compensation protein protein.
Length = 1455
Score = 31.5 bits (68), Expect = 0.88
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +1
Query: 208 IDLTEEDEICLKINEKVLKFIKGPNNKMTELETRQDELLNKLEILYE--RIKTISSQCKL 381
+ LT+ D+ L NE+ + NN++ +L + +L+NK+ I E R TI+ +C L
Sbjct: 609 VQLTQMDDDQLLENEQEAR---DRNNQIMQLRAQVQQLINKMSIEQELSRCVTIALRCVL 665
Query: 382 DNMSANIQ 405
+ +A I+
Sbjct: 666 NGETAEIK 673
>Z68296-3|CAB54197.2| 223|Caenorhabditis elegans Hypothetical
protein C46C2.5 protein.
Length = 223
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +1
Query: 286 KMTELETRQDELLNKLEILYERIKTISSQCKLDNMSANIQSSNASKV 426
++ E+ET Q+ N +++LY++ S L ++S +I+SSN S +
Sbjct: 59 ELREIETLQNSKFNNVDVLYDKDLMKSLFGDLKSISLSIKSSNCSSM 105
>Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical
protein W08E3.3 protein.
Length = 395
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 193 HIKNPIDLTEEDEICL-KINEKVLKFIKGPNNKMTELETRQDELLNKLE 336
H++ +D + EI ++ K L+FI GP +K+ +L TR ++ K+E
Sbjct: 133 HVEGEVDPVRDLEIISNELFAKDLQFIDGPLDKVEKLFTRANDKTKKIE 181
>U41027-4|AAC48196.2| 455|Caenorhabditis elegans Hypothetical
protein R08E3.3a protein.
Length = 455
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 673 SALSTPIXGNVNILRYLSLAVIXPYPYXKFPY*SIXDPHXFDXSIIKH 816
+AL T + GN+N LR + +I P S+ H F S++KH
Sbjct: 83 TALHTVLYGNINNLRSAFIELIRKLPADAQEAVSLDQGHQFLESVVKH 130
>U41027-3|AAQ82846.1| 516|Caenorhabditis elegans Hypothetical
protein R08E3.3b protein.
Length = 516
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 673 SALSTPIXGNVNILRYLSLAVIXPYPYXKFPY*SIXDPHXFDXSIIKH 816
+AL T + GN+N LR + +I P S+ H F S++KH
Sbjct: 83 TALHTVLYGNINNLRSAFIELIRKLPADAQEAVSLDQGHQFLESVVKH 130
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +1
Query: 151 VDHDDKIELPKCMYHIKNPIDLTEEDEICLKINEKVLKFIKGPNNKMTELETRQDELLNK 330
V + DK+ +P + H ++ I+L E+ KIN+ V + G N + + E K
Sbjct: 12422 VIYSDKVAVPVALGHYEDKIELLEKITDAEKINDGVAIALYGLNAARQQFQLHGRENATK 12481
Query: 331 LEIL 342
+ IL
Sbjct: 12482 VVIL 12485
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +1
Query: 151 VDHDDKIELPKCMYHIKNPIDLTEEDEICLKINEKVLKFIKGPNNKMTELETRQDELLNK 330
V + DK+ +P + H ++ I+L E+ KIN+ V + G N + + E K
Sbjct: 12422 VIYSDKVAVPVALGHYEDKIELLEKITDAEKINDGVAIALYGLNAARQQFQLHGRENATK 12481
Query: 331 LEIL 342
+ IL
Sbjct: 12482 VVIL 12485
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 263 LRTFSLIFKQISSSSVRSIGFLMWYIHFGNSILSSWSTILFITYIII 123
+ T I + S R++ F++W I S+ SWST T ++I
Sbjct: 43 VETKPTIGSNVEEVSYRNLDFVIWDIGGQESLRKSWSTYYVQTDVVI 89
>Z22174-1|CAA80128.1| 732|Caenorhabditis elegans Hypothetical
protein K01B6.1 protein.
Length = 732
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 151 VDH-DDKIELPKCMYHIKNPIDLTEEDEICLKINEKVLKFIKGPNNKM 291
+DH ++K+E K MY ++L +E+ I +I KVL + N M
Sbjct: 501 IDHIEEKLETMKHMYRFPEQVELLKENIIKYEIAVKVLSESRALRNVM 548
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform b protein.
Length = 4034
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/83 (20%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 217 TEEDEICLKINEKVLKFIKGPNNKMTELETRQDELLNKLEILYERIKTISSQCKLDNMSA 396
+ + + K+ E + I G + +E E + KLE +++ +KT++ Q ++++
Sbjct: 2426 SNKQNLIQKVRESSEELIHGIWSTASETEKVAIVVKEKLETVHQAMKTLAIQMATQSVNS 2485
Query: 397 NIQSS--NASKVESVITPEEVVL 459
+ S N + ++S+ P V+
Sbjct: 2486 ELIGSEGNLASIKSITLPTREVI 2508
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/83 (20%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 217 TEEDEICLKINEKVLKFIKGPNNKMTELETRQDELLNKLEILYERIKTISSQCKLDNMSA 396
+ + + K+ E + I G + +E E + KLE +++ +KT++ Q ++++
Sbjct: 2426 SNKQNLIQKVRESSEELIHGIWSTASETEKVAIVVKEKLETVHQAMKTLAIQMATQSVNS 2485
Query: 397 NIQSS--NASKVESVITPEEVVL 459
+ S N + ++S+ P V+
Sbjct: 2486 ELIGSEGNLASIKSITLPTREVI 2508
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,255,841
Number of Sequences: 27780
Number of extensions: 333899
Number of successful extensions: 977
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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