Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_H17
         (861 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical pr...    63   3e-10
Z82081-5|CAB04958.1|  344|Caenorhabditis elegans Hypothetical pr...    38   0.012
Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical pr...    38   0.012
U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol dehydro...    37   0.016
AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical ...    37   0.016
AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical ...    37   0.016
AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical ...    36   0.049
Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical pr...    35   0.086
Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical pr...    32   0.46 
U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr...    29   5.6  
U97011-2|AAB52325.2|  689|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U88172-11|AAB42257.1|  390|Caenorhabditis elegans Hypothetical p...    28   9.8  
U88172-10|AAM97988.1|  437|Caenorhabditis elegans Hypothetical p...    28   9.8  
U39850-10|AAA81060.2|  439|Caenorhabditis elegans Hypothetical p...    28   9.8  

>Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical
           protein F39B2.3 protein.
          Length = 328

 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 36/92 (39%), Positives = 52/92 (56%)
 Frame = +2

Query: 452 PKTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAELVSVPAQYVYALPEGMSA 631
           P  P++ G + AG +E VGE+V N KVGD+V    E  + AE V+V     + LPEG+S 
Sbjct: 64  PNLPYVPGKDGAGFVELVGESVKNVKVGDRVWYGSEADSTAEYVAV--NRPFELPEGVSF 121

Query: 632 LDAVAITTNYVVAYLLLFEMANLTPGKSLLVH 727
            +  ++   Y+ AY  LF +A    G  +LVH
Sbjct: 122 EEGASLGVPYLTAYRALFHLAGAKTGDVILVH 153



 Score = 34.7 bits (76), Expect = 0.086
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +1

Query: 289 MRAVVLTGFGGLKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGRH 441
           MRA V+  FG    ++ ++   P + + +VL+R  A G+N  D  +R G++
Sbjct: 10  MRAAVVRRFGAPDVIEAVESDMPRLEKNQVLVRNYAAGVNPVDTYIRAGQY 60


>Z82081-5|CAB04958.1|  344|Caenorhabditis elegans Hypothetical
           protein W09H1.5 protein.
          Length = 344

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
 Frame = +2

Query: 452 PKTPFILGFECAGEIEQVGENVTNFKVGDQVVA-LPEYRAWAELVSVPAQYVYALPEGMS 628
           P  P + G E  G++  VG NV++ KVGD V+        W EL       ++ +   +S
Sbjct: 73  PALPAVGGNEGFGKVISVGSNVSSIKVGDHVIPDRSGLGTWRELGLHQENDLFPIDNTLS 132

Query: 629 ALDAVAITTNYVVAYLLLFEMANLTPGKSL 718
              A     N   AY +L +  +L  G ++
Sbjct: 133 MEYAATFQVNPPTAYRMLKDFIDLKKGDTV 162


>Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.6 protein.
          Length = 347

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 455 KTPFILGFECAGEIEQVGENVTNFKVGDQVVALP 556
           K P +LG E +G + ++G  V  FKVGD++   P
Sbjct: 59  KEPMVLGHESSGVVSEIGSEVKGFKVGDRIAMEP 92


>U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol
           dehydrogenase protein.
          Length = 384

 Score = 37.1 bits (82), Expect = 0.016
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +2

Query: 461 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 553
           P +LG E +G +E VGE VT F  GD VV L
Sbjct: 65  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 95


>AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical
           protein H24K24.3a protein.
          Length = 384

 Score = 37.1 bits (82), Expect = 0.016
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +2

Query: 461 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 553
           P +LG E +G +E VGE VT F  GD VV L
Sbjct: 65  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 95


>AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical
           protein H24K24.3b protein.
          Length = 386

 Score = 37.1 bits (82), Expect = 0.016
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +2

Query: 461 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 553
           P +LG E +G +E VGE VT F  GD VV L
Sbjct: 67  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 97


>AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical
           protein Y50D4C.2 protein.
          Length = 554

 Score = 35.5 bits (78), Expect = 0.049
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +2

Query: 461 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 553
           P +LG E +G +E VG+ VT F  GD VV L
Sbjct: 238 PVVLGHEGSGIVESVGKGVTGFAPGDHVVPL 268


>Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.5 protein.
          Length = 347

 Score = 34.7 bits (76), Expect = 0.086
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 455 KTPFILGFECAGEIEQVGENVTNFKVGDQVVALP 556
           K P I+G E +G + +VG  V + KVGD++   P
Sbjct: 59  KEPMIVGHETSGIVSEVGNEVKHLKVGDRIAMEP 92


>Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical
           protein K12G11.3 protein.
          Length = 349

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +2

Query: 461 PFILGFECAGEIEQVGENVTNFKVGDQ 541
           P + G E AG + Q+G+NVT +++GD+
Sbjct: 64  PLVGGHEGAGSVVQIGKNVTGWQLGDK 90


>U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical
           protein T20B12.1 protein.
          Length = 771

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 532 HLKIGDIFANLLDFTSAFEAQDERSLR 452
           H+ +GDI  NL  FT A E  D+R+ R
Sbjct: 426 HVYLGDITRNLEYFTKAIELSDDRNAR 452


>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
           protein C34F6.1 protein.
          Length = 1043

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +3

Query: 72  PAGSLVRASFAAERYSFRSTR--PYHQND*EYGRRRDSSTGEDPDRKWCY*NTARGNARK 245
           P G      +     SF +T   P   ++    +RRD+  G++   +W + N A+   R 
Sbjct: 208 PNGGCPEDHYCHTGASFSTTACCPLVSSEDRCAQRRDTGEGDELVARWYFDNQAKECRRF 267

Query: 246 IYRGEKG 266
           +Y+G +G
Sbjct: 268 LYKGIRG 274


>U97011-2|AAB52325.2|  689|Caenorhabditis elegans Hypothetical
           protein F31F7.2 protein.
          Length = 689

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +2

Query: 458 TPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAEL 580
           TP I  F+   EI+ + + ++  K+G   VA+ ++  W+ +
Sbjct: 98  TPQITSFQHRAEIDFLRQVMSTMKMGSSKVAMAQFTPWSRI 138


>U88172-11|AAB42257.1|  390|Caenorhabditis elegans Hypothetical
           protein ZK354.2a protein.
          Length = 390

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -2

Query: 380 RTSPSPTVGSGFLSILTVLRPPKPVS 303
           RT+P  T  +GF  +LTV+R PK V+
Sbjct: 262 RTTPETT--AGFFDLLTVIREPKDVA 285


>U88172-10|AAM97988.1|  437|Caenorhabditis elegans Hypothetical
           protein ZK354.2b protein.
          Length = 437

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -2

Query: 380 RTSPSPTVGSGFLSILTVLRPPKPVS 303
           RT+P  T  +GF  +LTV+R PK V+
Sbjct: 262 RTTPETT--AGFFDLLTVIREPKDVA 285


>U39850-10|AAA81060.2|  439|Caenorhabditis elegans Hypothetical
           protein F52C9.3 protein.
          Length = 439

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = +3

Query: 528 RWATKWWLSPSTALGPSWC-LYRPSTCTRCPKECLPWMLLPSPRTTWWPI 674
           RWA  W +       P  C +    TC  C K C P  ++ +P+  WW +
Sbjct: 244 RWAYFWEML-KRGPAPIECHVEYEETCAGCEK-CRPKPIIEAPQWRWWHV 291


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,254,297
Number of Sequences: 27780
Number of extensions: 381776
Number of successful extensions: 1028
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)