Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_H11
(874 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26712-1|AAB09293.1| 770|Homo sapiens cbl-b truncated form 2 pr... 31 5.5
U26711-1|AAB09292.1| 810|Homo sapiens cbl-b truncated form 1 pr... 31 5.5
U26710-1|AAB09291.1| 982|Homo sapiens cbl-b protein. 31 5.5
BC032851-1|AAH32851.1| 982|Homo sapiens Cas-Br-M (murine) ecotr... 31 5.5
BC033786-1|AAH33786.2| 465|Homo sapiens ring finger protein 38 ... 30 9.5
AL354935-3|CAO03541.1| 465|Homo sapiens ring finger protein 38 ... 30 9.5
AL354935-2|CAO03540.1| 515|Homo sapiens ring finger protein 38 ... 30 9.5
AL354935-1|CAH70194.1| 439|Homo sapiens ring finger protein 38 ... 30 9.5
AL161792-4|CAO03554.1| 465|Homo sapiens ring finger protein 38 ... 30 9.5
AL161792-3|CAO03553.1| 515|Homo sapiens ring finger protein 38 ... 30 9.5
AL161792-1|CAI16895.1| 439|Homo sapiens ring finger protein 38 ... 30 9.5
AK024996-1|BAB15050.1| 332|Homo sapiens protein ( Homo sapiens ... 30 9.5
AF394047-1|AAM73697.1| 432|Homo sapiens RING finger protein 38 ... 30 9.5
>U26712-1|AAB09293.1| 770|Homo sapiens cbl-b truncated form 2
protein.
Length = 770
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 248 REAERPLPACSPPLADMLVLRPEQFIPLPP 159
R+ ++PLPA PPL D PE+ P+PP
Sbjct: 538 RKQDKPLPAPPPPLRDPPPPPPERPPPIPP 567
>U26711-1|AAB09292.1| 810|Homo sapiens cbl-b truncated form 1
protein.
Length = 810
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 248 REAERPLPACSPPLADMLVLRPEQFIPLPP 159
R+ ++PLPA PPL D PE+ P+PP
Sbjct: 538 RKQDKPLPAPPPPLRDPPPPPPERPPPIPP 567
>U26710-1|AAB09291.1| 982|Homo sapiens cbl-b protein.
Length = 982
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 248 REAERPLPACSPPLADMLVLRPEQFIPLPP 159
R+ ++PLPA PPL D PE+ P+PP
Sbjct: 538 RKQDKPLPAPPPPLRDPPPPPPERPPPIPP 567
>BC032851-1|AAH32851.1| 982|Homo sapiens Cas-Br-M (murine)
ecotropic retroviral transforming sequence b protein.
Length = 982
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 248 REAERPLPACSPPLADMLVLRPEQFIPLPP 159
R+ ++PLPA PPL D PE+ P+PP
Sbjct: 538 RKQDKPLPAPPPPLRDPPPPPPERPPPIPP 567
>BC033786-1|AAH33786.2| 465|Homo sapiens ring finger protein 38
protein.
Length = 465
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 179 VPVEVQAYPLMVDCRPGAGAPPHELPHPAPNGAPP 283
+PV A+P ++ P PPH PH P+ PP
Sbjct: 206 LPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPP 240
>AL354935-3|CAO03541.1| 465|Homo sapiens ring finger protein 38
protein.
Length = 465
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 179 VPVEVQAYPLMVDCRPGAGAPPHELPHPAPNGAPP 283
+PV A+P ++ P PPH PH P+ PP
Sbjct: 206 LPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPP 240
>AL354935-2|CAO03540.1| 515|Homo sapiens ring finger protein 38
protein.
Length = 515
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 179 VPVEVQAYPLMVDCRPGAGAPPHELPHPAPNGAPP 283
+PV A+P ++ P PPH PH P+ PP
Sbjct: 256 LPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPP 290
>AL354935-1|CAH70194.1| 439|Homo sapiens ring finger protein 38
protein.
Length = 439
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 179 VPVEVQAYPLMVDCRPGAGAPPHELPHPAPNGAPP 283
+PV A+P ++ P PPH PH P+ PP
Sbjct: 180 LPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPP 214
>AL161792-4|CAO03554.1| 465|Homo sapiens ring finger protein 38
protein.
Length = 465
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 179 VPVEVQAYPLMVDCRPGAGAPPHELPHPAPNGAPP 283
+PV A+P ++ P PPH PH P+ PP
Sbjct: 206 LPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPP 240
>AL161792-3|CAO03553.1| 515|Homo sapiens ring finger protein 38
protein.
Length = 515
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 179 VPVEVQAYPLMVDCRPGAGAPPHELPHPAPNGAPP 283
+PV A+P ++ P PPH PH P+ PP
Sbjct: 256 LPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPP 290
>AL161792-1|CAI16895.1| 439|Homo sapiens ring finger protein 38
protein.
Length = 439
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 179 VPVEVQAYPLMVDCRPGAGAPPHELPHPAPNGAPP 283
+PV A+P ++ P PPH PH P+ PP
Sbjct: 180 LPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPP 214
>AK024996-1|BAB15050.1| 332|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21343 fis, clone COL02679. ).
Length = 332
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 179 VPVEVQAYPLMVDCRPGAGAPPHELPHPAPNGAPP 283
+PV A+P ++ P PPH PH P+ PP
Sbjct: 73 LPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPP 107
>AF394047-1|AAM73697.1| 432|Homo sapiens RING finger protein 38
protein.
Length = 432
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 179 VPVEVQAYPLMVDCRPGAGAPPHELPHPAPNGAPP 283
+PV A+P ++ P PPH PH P+ PP
Sbjct: 173 LPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPP 207
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,407,992
Number of Sequences: 237096
Number of extensions: 1341518
Number of successful extensions: 10420
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10363
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -