Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_H09
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0165 + 22851863-22852566,22852811-22852964,22853112-228532...    31   1.7  
09_03_0006 + 11426346-11426420,11426733-11427452                       30   2.2  
08_02_0417 - 16904476-16904662,16904846-16905029,16905150-169058...    30   2.9  
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871...    29   6.8  
07_03_0037 + 12709014-12709104,12709407-12709612,12710033-127100...    28   9.0  

>05_05_0165 +
           22851863-22852566,22852811-22852964,22853112-22853261,
           22853769-22853930,22854070-22854242,22854330-22854396,
           22854556-22854722,22855216-22855374,22856187-22856276,
           22856392-22856483,22856587-22856681,22857328-22857405,
           22858364-22858459,22859132-22859206,22859290-22859381,
           22859462-22859624,22859734-22859794,22860016-22860116,
           22860567-22860614
          Length = 908

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
 Frame = -2

Query: 841 VLPPLSELNRSPXPNDRAQRVS----ERGXGXAPNXQTAXPRGXADSLMQKNLPHL 686
           VL  LS  + SP    R+Q VS    ERG G  P      PRG  D  +   L  L
Sbjct: 37  VLSALSSPSPSPSSASRSQSVSTAPLERGVGPGPATSREQPRGGGDLALAAELARL 92


>09_03_0006 + 11426346-11426420,11426733-11427452
          Length = 264

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 307 TAPLCRTSWSILFPSVRP 360
           TAPL  TSWS ++P++RP
Sbjct: 148 TAPLVSTSWSAMWPALRP 165


>08_02_0417 -
           16904476-16904662,16904846-16905029,16905150-16905897,
           16906003-16906227,16906318-16906485,16906803-16907453
          Length = 720

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +2

Query: 245 SMNAPYRLSTRVAVHTTASTELLPSVEHHGAYYFPRFVRVVDTNK 379
           S+N   RLS   +  TT S  L  S+E H A +   FV  +D  K
Sbjct: 332 SLNEWIRLSASSSQGTTFSASLKSSIEKHSAMWQDEFVSALDNFK 376


>04_02_0026 +
           8708765-8710935,8711021-8711272,8711353-8711463,
           8711553-8711634,8711909-8712100
          Length = 935

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 25/98 (25%), Positives = 38/98 (38%)
 Frame = +1

Query: 91  NTIIALTGGQVSSQSDARFSGYNGTSVKTTLXFIYISIDVQIRAVPNESTVQHERAVQTE 270
           N + A + GQVS + D  F   N   V T L  I +  +   + VP     QH  A+ T 
Sbjct: 218 NWVWAHSTGQVSDEGDILFETPNIEEVTTNLQQI-VEKERSGQLVPRRERDQHTAALGTA 276

Query: 271 XXXXXXXXXXXXTAPLCRTSWSILFPSVRPSRRHKQNF 384
                            +TSW + FP   P+ + +  +
Sbjct: 277 EHSGRVRGLSS------KTSWKVGFPQDAPNYKKRDKY 308


>07_03_0037 +
           12709014-12709104,12709407-12709612,12710033-12710097,
           12710143-12710404,12711332-12711448,12711779-12712056,
           12712304-12712406
          Length = 373

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -1

Query: 326 VLQRGAVQCWPWCGRPPWCSVCTARS 249
           V+QR  VQ W  C  PP CS    R+
Sbjct: 5   VVQRQYVQGWEGCSEPPICSESAERN 30


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,399,685
Number of Sequences: 37544
Number of extensions: 281166
Number of successful extensions: 673
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)