Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_H09
         (914 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z81062-6|CAB02949.2|  320|Caenorhabditis elegans Hypothetical pr...    30   2.0  

>Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical protein
            F26H9.8 protein.
          Length = 1377

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -1

Query: 344  NNMLHDVLQRGAVQCWPWCGRPPWCSVCTARSCCTVD 234
            NNMLH+V  +   Q W WC    WC   +     T+D
Sbjct: 1293 NNMLHEVPIKSLPQEWLWC--ETWCDDGSKEKAKTID 1327


>Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical protein
            F26H9.8 protein.
          Length = 1377

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -1

Query: 344  NNMLHDVLQRGAVQCWPWCGRPPWCSVCTARSCCTVD 234
            NNMLH+V  +   Q W WC    WC   +     T+D
Sbjct: 1293 NNMLHEVPIKSLPQEWLWC--ETWCDDGSKEKAKTID 1327


>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
            F48E3.3 protein.
          Length = 1493

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 344  NNMLHDVLQRGAVQCWPWCGRPPWCSVCTARSCCTVD 234
            NNM+H V  +   Q W WC    WC   + ++  T+D
Sbjct: 1403 NNMIHQVKIKSLPQEWLWC--ETWCDDGSKKNAKTID 1437


>Z81062-6|CAB02949.2|  320|Caenorhabditis elegans Hypothetical
           protein F15A4.7 protein.
          Length = 320

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 275 WCSVCTARSCCTVDSLGTALICTSILIY 192
           W S+   +S C + +LG  ++CTS+  Y
Sbjct: 192 WASLSLFQSICILTALGFTIVCTSVTFY 219


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,134,455
Number of Sequences: 27780
Number of extensions: 255749
Number of successful extensions: 489
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)