Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_H02
(860 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q02543 Cluster: 60S ribosomal protein L18a; n=120; Fung... 91 4e-17
UniRef50_P05732 Cluster: 60S ribosomal protein L20; n=6; Dikarya... 75 2e-12
UniRef50_P51418 Cluster: 60S ribosomal protein L18a-2; n=24; Vir... 71 5e-11
UniRef50_UPI0000D9EE80 Cluster: PREDICTED: similar to ribosomal ... 67 6e-10
UniRef50_Q54MK8 Cluster: Ribosomal protein L18a; n=2; Eukaryota|... 66 1e-09
UniRef50_Q4N436 Cluster: 60S ribosomal protein L18, putative; n=... 66 1e-09
UniRef50_Q7QNQ0 Cluster: GLP_7_3170_2649; n=1; Giardia lamblia A... 64 4e-09
UniRef50_Q4PBN4 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_Q5CNE7 Cluster: 60S ribosomal protein L18a; n=2; Crypto... 56 1e-06
UniRef50_A2E7V4 Cluster: Ribosomal protein L18ae, putative; n=4;... 55 2e-06
UniRef50_Q6BGJ5 Cluster: 60S ribosomal L18A, putative; n=5; Olig... 53 1e-05
UniRef50_Q4Q5J4 Cluster: 60S ribosomal protein L18a, putative; n... 51 3e-05
UniRef50_Q015Y8 Cluster: Putative ribosomal protein L18a; n=1; O... 49 1e-04
UniRef50_Q17L60 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_UPI00004983AA Cluster: 60S ribosomal protein L18a; n=1;... 46 0.001
UniRef50_Q98S89 Cluster: 60S ribosomal protein L18A; n=1; Guilla... 45 0.002
UniRef50_Q0IFJ6 Cluster: Putative uncharacterized protein; n=5; ... 40 0.11
UniRef50_Q8SRD7 Cluster: RIBOSOMAL PROTEIN L18A; n=1; Encephalit... 38 0.25
>UniRef50_Q02543 Cluster: 60S ribosomal protein L18a; n=120;
Fungi/Metazoa group|Rep: 60S ribosomal protein L18a -
Homo sapiens (Human)
Length = 176
Score = 90.6 bits (215), Expect = 4e-17
Identities = 44/87 (50%), Positives = 53/87 (60%)
Frame = +2
Query: 101 MXAKGQLRXXXVIGRKLXXXXXXXXXXYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 280
M A G LR V+GR L Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 281 IVXXXXXXXXXXXXXXNFGIWLRYESR 361
IV NFGIWLRY+SR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSR 87
Score = 89.4 bits (212), Expect = 1e-16
Identities = 45/75 (60%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = +3
Query: 309 KAPSRLRILVSGYAMSLVSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKV 488
K+P R++ SG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KV
Sbjct: 70 KSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKV 129
Query: 489 EVIKGC-CVSPSTGQ 530
E I C P+ Q
Sbjct: 130 EEIAASKCRRPAVKQ 144
>UniRef50_P05732 Cluster: 60S ribosomal protein L20; n=6;
Dikarya|Rep: 60S ribosomal protein L20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 176
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/81 (41%), Positives = 47/81 (58%)
Frame = +2
Query: 119 LRXXXVIGRKLXXXXXXXXXXYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXX 298
L+ V+GRK+ ++MR+F+P+ VAKSR+WYFL+ + K KK TGEIV
Sbjct: 3 LKEYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINE 62
Query: 299 XXXXXXXXXXNFGIWLRYESR 361
FGIW+RY+SR
Sbjct: 63 ISEPKPLKAKVFGIWIRYDSR 83
Score = 57.2 bits (132), Expect = 5e-07
Identities = 26/42 (61%), Positives = 31/42 (73%)
Frame = +3
Query: 363 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKV 488
SG HNMY+E+RD + GAV Y DM ARHRAR SI+I+KV
Sbjct: 84 SGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRILKV 125
>UniRef50_P51418 Cluster: 60S ribosomal protein L18a-2; n=24;
Viridiplantae|Rep: 60S ribosomal protein L18a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 178
Score = 70.5 bits (165), Expect = 5e-11
Identities = 31/76 (40%), Positives = 46/76 (60%)
Frame = +2
Query: 134 VIGRKLXXXXXXXXXXYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXX 313
V+GR L Y+M++++ + + AKS+FWYFLR+LKK KK+ G+++
Sbjct: 11 VVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIYEKN 70
Query: 314 XXXXXNFGIWLRYESR 361
NFGIWLRY+SR
Sbjct: 71 PTTIKNFGIWLRYQSR 86
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 363 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKG-CCVSPSTGQ 530
+G HNMY+EYRD ++ GAV Q Y +M +RHR R IQIIK + C ST Q
Sbjct: 87 TGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVPAKLCKRESTKQ 143
>UniRef50_UPI0000D9EE80 Cluster: PREDICTED: similar to ribosomal
protein L18a, partial; n=1; Macaca mulatta|Rep:
PREDICTED: similar to ribosomal protein L18a, partial -
Macaca mulatta
Length = 124
Score = 66.9 bits (156), Expect = 6e-10
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = +2
Query: 119 LRXXXVIGRKLXXXXXXXXXXYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 286
LR V+GR L Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 65 LREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIV 120
>UniRef50_Q54MK8 Cluster: Ribosomal protein L18a; n=2;
Eukaryota|Rep: Ribosomal protein L18a - Dictyostelium
discoideum AX4
Length = 191
Score = 66.1 bits (154), Expect = 1e-09
Identities = 31/76 (40%), Positives = 43/76 (56%)
Frame = +2
Query: 134 VIGRKLXXXXXXXXXXYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXX 313
V+GR + Y+MR+F+ I AKSRFWYFL ++ K KK+TGEI+
Sbjct: 28 VVGRHVPTERDANPKIYRMRLFAQTSIHAKSRFWYFLSKIVKMKKSTGEILNVTEIFEDK 87
Query: 314 XXXXXNFGIWLRYESR 361
NFG+++RY SR
Sbjct: 88 PQKVKNFGVFIRYNSR 103
Score = 55.6 bits (128), Expect = 2e-06
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +3
Query: 363 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVI 497
SG HN+Y+EYRDL+ GAV+Q Y +M +RH AR SI II ++ I
Sbjct: 104 SGTHNIYKEYRDLTRCGAVSQMYDEMASRHSARESSIHIIDIKEI 148
>UniRef50_Q4N436 Cluster: 60S ribosomal protein L18, putative; n=9;
Aconoidasida|Rep: 60S ribosomal protein L18, putative -
Theileria parva
Length = 191
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/57 (56%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +3
Query: 363 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKV-EVIKGCCVSPSTGQ 530
+G HNMY+EYRDL+ GAV+Q Y DM RHRARA IQII+V E+ C P Q
Sbjct: 101 TGTHNMYKEYRDLTRTGAVSQMYGDMAGRHRARASCIQIIRVAEISDSDCKKPKVTQ 157
Score = 62.1 bits (144), Expect = 2e-08
Identities = 27/76 (35%), Positives = 43/76 (56%)
Frame = +2
Query: 134 VIGRKLXXXXXXXXXXYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXX 313
++GR Y+M +F+ + ++AKSRFWYF+++L K K++ GEI+
Sbjct: 25 IVGRAAPTKKNPNPNTYRMSVFAKNSVLAKSRFWYFMKRLNKAKRSGGEILACNRLNEPK 84
Query: 314 XXXXXNFGIWLRYESR 361
NFG+ LRY+SR
Sbjct: 85 KGQVKNFGVLLRYKSR 100
>UniRef50_Q7QNQ0 Cluster: GLP_7_3170_2649; n=1; Giardia lamblia ATCC
50803|Rep: GLP_7_3170_2649 - Giardia lamblia ATCC 50803
Length = 173
Score = 64.1 bits (149), Expect = 4e-09
Identities = 33/76 (43%), Positives = 43/76 (56%)
Frame = +2
Query: 134 VIGRKLXXXXXXXXXXYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXX 313
V GR+L ++M I++P+ IVAKSRFWY L+ LKK K+T GEI+
Sbjct: 7 VYGRRLPSEKFPEPEVFRMTIYAPNEIVAKSRFWYHLKSLKKIKRTHGEIL-DCQHIEEN 65
Query: 314 XXXXXNFGIWLRYESR 361
NFG+ LRY SR
Sbjct: 66 GDFVKNFGVLLRYRSR 81
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 366 GVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVI 497
G HNMYRE R+ + A+ + Y +M + RAR H IQII V+ +
Sbjct: 83 GQHNMYREVRETTSARAMDKVYSEMAGQCRARYHDIQIINVKEV 126
>UniRef50_Q4PBN4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 532
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/57 (52%), Positives = 37/57 (64%)
Frame = +2
Query: 116 QLRXXXVIGRKLXXXXXXXXXXYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 286
+L VIGR L Y+MRIF+ + VA+SRFWYF+RQL+K KK TGEIV
Sbjct: 311 RLTEYMVIGRHLPTEKEPSPKLYRMRIFAVNKSVAESRFWYFVRQLRKMKKATGEIV 367
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/71 (42%), Positives = 40/71 (56%)
Frame = +3
Query: 288 LLRKFQRKAPSRLRILVSGYAMSLVSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAH 467
L RK K P +++ + SG HNMY+E+R LS A Y+DM ARHRAR
Sbjct: 420 LCRKIHEKKPIKVKNFAVWLRYNSRSGTHNMYKEFRALSRAEAAESLYQDMAARHRARFA 479
Query: 468 SIQIIKVEVIK 500
SI I+K+ I+
Sbjct: 480 SIHILKIAEIE 490
>UniRef50_Q5CNE7 Cluster: 60S ribosomal protein L18a; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L18a -
Cryptosporidium hominis
Length = 185
Score = 56.0 bits (129), Expect = 1e-06
Identities = 32/93 (34%), Positives = 46/93 (49%)
Frame = +2
Query: 83 SLKTPKMXAKGQLRXXXVIGRKLXXXXXXXXXXYKMRIFSPDPIVAKSRFWYFLRQLKKF 262
S+ P + K + VIGR +++ IF+P+ +VAKSRF+YF+ +L K
Sbjct: 3 SMPDPSLQMK--VNQYMVIGRGKPTELNPHPKVFRVCIFAPNEVVAKSRFFYFMSRLNKV 60
Query: 263 KKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESR 361
KK GEI+ NF I L+Y SR
Sbjct: 61 KKANGEILSVTRIFEKRPTYVKNFAILLQYRSR 93
Score = 50.4 bits (115), Expect = 6e-05
Identities = 28/72 (38%), Positives = 43/72 (59%)
Frame = +3
Query: 282 LSLLRKFQRKAPSRLRILVSGYAMSLVSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 461
LS+ R F+++ P+ ++ + V MY+EYRD+S GAV+Q Y ++ HRA+
Sbjct: 68 LSVTRIFEKR-PTYVKNFAILLQYRSRTNVVYMYKEYRDISKTGAVSQMYEELAGSHRAQ 126
Query: 462 AHSIQIIKVEVI 497
SIQII+V I
Sbjct: 127 RSSIQIIRVSQI 138
>UniRef50_A2E7V4 Cluster: Ribosomal protein L18ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L18ae,
putative - Trichomonas vaginalis G3
Length = 213
Score = 55.2 bits (127), Expect = 2e-06
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +2
Query: 119 LRXXXVIGRKLXXXXXXXXXXYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXX 298
L+ VIGR ++++F+PD ++AKS+FW +++ + KK GE++
Sbjct: 3 LKQYLVIGRPYPTKEIANPPAVRVQVFAPDEVIAKSKFWTVAQRIARLKKAHGEVLAVKH 62
Query: 299 XXXXXXXXXXNFGIWLRYES 358
N+GIWL Y S
Sbjct: 63 VIEPEPTRVKNYGIWLSYRS 82
Score = 42.3 bits (95), Expect = 0.015
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 372 HNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKV 488
HN+Y+EYRD + GAVT+ ++ H A +I IIKV
Sbjct: 87 HNVYKEYRDTTTEGAVTKMLAELAGTHDTTADNISIIKV 125
>UniRef50_Q6BGJ5 Cluster: 60S ribosomal L18A, putative; n=5;
Oligohymenophorea|Rep: 60S ribosomal L18A, putative -
Paramecium tetraurelia
Length = 192
Score = 52.8 bits (121), Expect = 1e-05
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = +2
Query: 116 QLRXXXVIGRKLXXXXXXXXXXYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXX 295
++R V GR+L MRIF+ + + AKSRFW+ LR+L K + + G+I+
Sbjct: 17 KIRQYLVSGRRLPSKEDPNPKVISMRIFARNTVAAKSRFWWNLRRLNKLRPSHGQILAVQ 76
Query: 296 XXXXXXXXXXXNFGIWLRYESR 361
+GI L+Y+SR
Sbjct: 77 ELFERRDTNVKTYGIVLKYQSR 98
Score = 52.8 bits (121), Expect = 1e-05
Identities = 19/43 (44%), Positives = 32/43 (74%)
Frame = +3
Query: 369 VHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVI 497
+HNMY+E+RD ++ GAV+Q Y++M HRA+ +I I++ V+
Sbjct: 101 IHNMYKEFRDTTLNGAVSQLYQEMAGNHRAQPQTIHILRTSVL 143
>UniRef50_Q4Q5J4 Cluster: 60S ribosomal protein L18a, putative; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18a,
putative - Leishmania major
Length = 179
Score = 51.2 bits (117), Expect = 3e-05
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +3
Query: 366 GVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVI 497
G M +E+RD+S GAV+Q Y D+ +RHRAR H+I+++ V+ I
Sbjct: 88 GYTRMVKEFRDVSKTGAVSQAYHDLASRHRARYHNIEVLNVKSI 131
Score = 47.6 bits (108), Expect = 4e-04
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +2
Query: 110 KGQLRXXXVIGRKLXXXXXXXXXXYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 286
K LR V+GR+ YK +F+P+ +VAKSRFW +R K K T G+++
Sbjct: 3 KPHLRHYQVVGRESPSEKNPEPTVYKFEVFAPNFVVAKSRFWRMMRVKNKVKATHGDVL 61
>UniRef50_Q015Y8 Cluster: Putative ribosomal protein L18a; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein L18a
- Ostreococcus tauri
Length = 254
Score = 49.2 bits (112), Expect = 1e-04
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3
Query: 363 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKV 488
+G HN Y+EYR+ ++ AV Y +M +RHR R+ +QIIK+
Sbjct: 162 TGFHNSYKEYRETTMNKAVDALYEEMASRHRVRSSQLQIIKI 203
>UniRef50_Q17L60 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 175
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/56 (44%), Positives = 31/56 (55%)
Frame = +2
Query: 182 YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLR 349
+K++IF+P IV K FW F+RQL +FKKTT EIV N G LR
Sbjct: 20 FKIKIFAPAQIVPKCHFWCFMRQLCQFKKTTSEIVLVKRILEKTPLRLMNLGRRLR 75
>UniRef50_UPI00004983AA Cluster: 60S ribosomal protein L18a; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18a - Entamoeba histolytica HM-1:IMSS
Length = 173
Score = 46.0 bits (104), Expect = 0.001
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = +3
Query: 366 GVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVI 497
G+HN+ ++YRD++ GAV Q Y D+ +++R R IQ+I + +
Sbjct: 82 GIHNITKQYRDVTRVGAVRQMYNDLASQYRTRQDKIQLISITTV 125
Score = 45.6 bits (103), Expect = 0.002
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 182 YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYES 358
++ R+F+P+ +VAKS+FW L++ K KK E++ N+ I+LRY S
Sbjct: 21 FRSRVFAPNYVVAKSKFWMMLKKQHKVKKINAELLQCQPIFEKNPTVVKNYQIFLRYVS 79
>UniRef50_Q98S89 Cluster: 60S ribosomal protein L18A; n=1;
Guillardia theta|Rep: 60S ribosomal protein L18A -
Guillardia theta (Cryptomonas phi)
Length = 159
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +2
Query: 182 YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIW 343
Y M+ FSP+ I AKS+FW L++ +K KK G I+ +GIW
Sbjct: 22 YFMKNFSPNKITAKSKFWSVLKKTQKLKKKNGSIIIAQKIYEKKNNFVKTYGIW 75
Score = 43.6 bits (98), Expect = 0.007
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +3
Query: 351 MSLVSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIK 500
+ + +G N+++EYRD + GAV Q Y ++G R + + + I++VE IK
Sbjct: 78 VKIKNGYVNLFKEYRDFMMTGAVEQFYIELGGRFKIKPKDVTILRVERIK 127
>UniRef50_Q0IFJ6 Cluster: Putative uncharacterized protein; n=5;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 153
Score = 39.5 bits (88), Expect = 0.11
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +3
Query: 426 CYRDMGARHRARAHSIQIIKVEVIK 500
CY +RHRARAHSI+IIKVE +K
Sbjct: 87 CYSGTPSRHRARAHSIKIIKVESVK 111
Score = 33.5 bits (73), Expect = 7.0
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 134 VIGRKLXXXXXXXXXXYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXX 313
VI RKL +K++ F+P IVAK RF + KFK+TT EIV
Sbjct: 8 VIARKLPKKNRNASL-FKIKTFAPAQIVAKFRF------VSKFKQTTSEIVSVKRILEKT 60
Query: 314 XXXXXNFG-IWLRYES 358
+ G + LRY+S
Sbjct: 61 PLRLMSLGMVRLRYDS 76
>UniRef50_Q8SRD7 Cluster: RIBOSOMAL PROTEIN L18A; n=1;
Encephalitozoon cuniculi|Rep: RIBOSOMAL PROTEIN L18A -
Encephalitozoon cuniculi
Length = 173
Score = 38.3 bits (85), Expect = 0.25
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 363 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVI 497
SGVHN Y+E R +S A+ R++ R + + ++ II V+V+
Sbjct: 87 SGVHNAYKECRAISKCWAIDHVLRELAGRQKLKRSAVDIISVDVV 131
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,165,094
Number of Sequences: 1657284
Number of extensions: 7435261
Number of successful extensions: 16334
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 16017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16329
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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