Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_H02
         (860 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal prot...   107   3e-23
AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p pro...   107   3e-23
AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA...   107   3e-23
AE014296-2286|AAF49811.1| 1172|Drosophila melanogaster CG10738-P...    32   1.2  
AE014296-2285|AAN11824.1| 1272|Drosophila melanogaster CG10738-P...    32   1.2  

>X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal protein
           L18a protein.
          Length = 177

 Score =  107 bits (256), Expect = 3e-23
 Identities = 53/87 (60%), Positives = 57/87 (65%)
 Frame = +2

Query: 101 MXAKGQLRXXXVIGRKLXXXXXXXXXXYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 280
           M AKG L+   V+GRKL          YKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1   MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60

Query: 281 IVXXXXXXXXXXXXXXNFGIWLRYESR 361
           IV              NFGIWLRY+SR
Sbjct: 61  IVSIKQVYETSPVKIKNFGIWLRYDSR 87



 Score = 91.9 bits (218), Expect = 1e-18
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = +3

Query: 363 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVI 497
           SG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQIIKV+ I
Sbjct: 88  SGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSI 132


>AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p
           protein.
          Length = 177

 Score =  107 bits (256), Expect = 3e-23
 Identities = 53/87 (60%), Positives = 57/87 (65%)
 Frame = +2

Query: 101 MXAKGQLRXXXVIGRKLXXXXXXXXXXYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 280
           M AKG L+   V+GRKL          YKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1   MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60

Query: 281 IVXXXXXXXXXXXXXXNFGIWLRYESR 361
           IV              NFGIWLRY+SR
Sbjct: 61  IVSIKQVYETSPVKIKNFGIWLRYDSR 87



 Score = 91.9 bits (218), Expect = 1e-18
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = +3

Query: 363 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVI 497
           SG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQIIKV+ I
Sbjct: 88  SGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSI 132


>AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA
           protein.
          Length = 177

 Score =  107 bits (256), Expect = 3e-23
 Identities = 53/87 (60%), Positives = 57/87 (65%)
 Frame = +2

Query: 101 MXAKGQLRXXXVIGRKLXXXXXXXXXXYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 280
           M AKG L+   V+GRKL          YKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1   MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60

Query: 281 IVXXXXXXXXXXXXXXNFGIWLRYESR 361
           IV              NFGIWLRY+SR
Sbjct: 61  IVSIKQVYETSPVKIKNFGIWLRYDSR 87



 Score = 91.9 bits (218), Expect = 1e-18
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = +3

Query: 363 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVI 497
           SG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQIIKV+ I
Sbjct: 88  SGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSI 132


>AE014296-2286|AAF49811.1| 1172|Drosophila melanogaster CG10738-PA,
           isoform A protein.
          Length = 1172

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = +3

Query: 270 PLVKLSLLRKFQRKAPSRLRILVSGYAMSLVSGVHNMYREYRDLSVGGAVTQCYRDMGA- 446
           PL+ L  L  F    P+   +   GY  +      N+      L++ GA++    ++ A 
Sbjct: 20  PLLLLLFLLAFSNFRPTHGEVFTLGYLTASQRRPGNLDYNRPGLTISGAISLAVEEVNAG 79

Query: 447 RHRARAHSIQIIKVE 491
           R R R HS+Q +  E
Sbjct: 80  RLRDRGHSLQFVVAE 94


>AE014296-2285|AAN11824.1| 1272|Drosophila melanogaster CG10738-PB,
           isoform B protein.
          Length = 1272

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = +3

Query: 270 PLVKLSLLRKFQRKAPSRLRILVSGYAMSLVSGVHNMYREYRDLSVGGAVTQCYRDMGA- 446
           PL+ L  L  F    P+   +   GY  +      N+      L++ GA++    ++ A 
Sbjct: 20  PLLLLLFLLAFSNFRPTHGEVFTLGYLTASQRRPGNLDYNRPGLTISGAISLAVEEVNAG 79

Query: 447 RHRARAHSIQIIKVE 491
           R R R HS+Q +  E
Sbjct: 80  RLRDRGHSLQFVVAE 94


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,482,396
Number of Sequences: 53049
Number of extensions: 353443
Number of successful extensions: 844
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)