Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_H01
(883 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 81 5e-14
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 78 3e-13
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 73 1e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 58 4e-07
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 52 3e-05
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 47 6e-04
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 46 0.001
UniRef50_A1K9K0 Cluster: Nucleotidyltransferase; n=41; Proteobac... 37 0.59
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 34 5.5
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 34 5.5
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 80.6 bits (190), Expect = 5e-14
Identities = 39/54 (72%), Positives = 40/54 (74%)
Frame = +2
Query: 716 PWKAPSCXLLFRPXXFTXYLFRLFSLREAWRFLIAHAVGIXXRCRSFAPSWAVC 877
P +APSC LLFRP FSLREAWRFLIAHAVGI RCRSFAPSWAVC
Sbjct: 49 PLEAPSCALLFRPCRLPDTC-PPFSLREAWRFLIAHAVGISVRCRSFAPSWAVC 101
Score = 55.6 bits (128), Expect = 2e-06
Identities = 35/72 (48%), Positives = 38/72 (52%)
Frame = +3
Query: 573 SKRPXTVKRPRCWRFSIGXAPLTSITKIDAQXRGGETPTGL*RYQAFPPGKLPRALSCSD 752
SK+ T R RFSIG APLTSITKIDAQ RGGET + FP + P
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL-EAPSCALLFR 60
Query: 753 PXXLXXTCSAFS 788
P L TC FS
Sbjct: 61 PCRLPDTCPPFS 72
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 77.8 bits (183), Expect = 3e-13
Identities = 40/70 (57%), Positives = 44/70 (62%)
Frame = -1
Query: 877 AXSPAWXERPTPXXDTYSVSYEKAPRFPKGEKAEQVXXKXXGSEQEXARGSFPGGNAWYL 698
A SPAW ERP P DT SVSYEKAPRFPKG+KAEQV K G + G+ G +
Sbjct: 30 AYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGA-AGEKSPAS 88
Query: 697 YSPVGVSPPL 668
SPVG PPL
Sbjct: 89 LSPVGFRPPL 98
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 72.5 bits (170), Expect = 1e-11
Identities = 47/93 (50%), Positives = 51/93 (54%)
Frame = +3
Query: 405 RGKAVCXLGALPXPRSLTRCXRSFGCGXRYQLTQRR*YGYPQNQGITQEKTXXQKASKRP 584
R +C G +P PRSLTR RSFGCG RY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT--------DGDGNFLEDT-RKTLSKEE 76
Query: 585 XTVKRPRCWRFSIGXAPLTSITKIDAQXRGGET 683
RPR RFSIG APLTSI K DAQ GGET
Sbjct: 77 I---RPRRSRFSIGSAPLTSIAKSDAQISGGET 106
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 57.6 bits (133), Expect = 4e-07
Identities = 27/38 (71%), Positives = 27/38 (71%)
Frame = -3
Query: 581 PFAGLLXXCFFLXYPLILWITVLPPLSELIPLAAXERP 468
P L C F YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 51.6 bits (118), Expect = 3e-05
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 470 VVRXRXAVSAHSKAVIRLSTKSGDNXGKN 556
VVR R AVSAHSKAVIRLST+SGDN GKN
Sbjct: 30 VVRLRRAVSAHSKAVIRLSTESGDNAGKN 58
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/36 (69%), Positives = 27/36 (75%)
Frame = +1
Query: 739 SPVPTLXVYXIPVPPFLPSGSVALSHSSRCRYXXSV 846
SPVPTL + + FLPSGSVALSHSSRCRY SV
Sbjct: 3 SPVPTLPLTGY-LSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 47.2 bits (107), Expect = 6e-04
Identities = 27/57 (47%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 381 CXNXSANXRGKAVCXLGALPXPRSLTRCXRSFGCGXRYQL-TQRR*YGYPQNQGITQ 548
C A R +AV L ALP RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 46.4 bits (105), Expect = 0.001
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +3
Query: 591 VKRPRCWRFSIGXAPLTSITKIDAQXRGGET 683
V+ PR RFSIG APLTSITK DAQ GGET
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGET 74
>UniRef50_A1K9K0 Cluster: Nucleotidyltransferase; n=41;
Proteobacteria|Rep: Nucleotidyltransferase - Azoarcus
sp. (strain BH72)
Length = 242
Score = 37.1 bits (82), Expect = 0.59
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 691 DYKDTRRFPLESSLVXSPVPTLXVYXIPVPPFLPSGSVALSHSSR 825
DY R P +++ SP P + + +P PPF P G AL R
Sbjct: 117 DYDYRRLLPRAAAMATSPAPLMHLVMVPNPPFHPGGDFALGADGR 161
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 33.9 bits (74), Expect = 5.5
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +1
Query: 760 VYXIPVPPFLPSGSVALSHSS 822
V IPVPPF +GSVALSHSS
Sbjct: 53 VSRIPVPPFSLAGSVALSHSS 73
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 33.9 bits (74), Expect = 5.5
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1
Query: 379 SAXXNRPTXGERRFAYW 429
+A NRPT GERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,179,288
Number of Sequences: 1657284
Number of extensions: 8259503
Number of successful extensions: 16183
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16174
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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