Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_G21
         (889 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    26   1.8  
CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase ...    26   1.8  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   7.1  
AY787484-1|AAV87217.1|   70|Anopheles gambiae GABA receptor subu...    23   9.4  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 456 RSYNKFDNIAENVLGRIILFSFN 388
           RS+ KF  +AE+V GR +L +F+
Sbjct: 82  RSFRKFKLVAESVNGRDVLTNFH 104


>CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase
           protein.
          Length = 562

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -3

Query: 611 TYHTAVQNRCPIPQNLQVHLGNQSSPCYRHKVGYHRDLD 495
           T+HT  Q    I + +++H    S+P Y ++  +  DL+
Sbjct: 402 TFHTDQQFIYAIDKTVRLHAQRSSAPTYYYQFSFDGDLN 440


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = -3

Query: 662 LSQRVHLASSWAPRELHTYHTAVQNRCPIPQNLQVHLGNQSSPC 531
           L  R+H   SW P        A Q    + Q +  H G ++S C
Sbjct: 748 LGVRLHYNLSWVPHVKAVIQKATQIVQAVTQLMPNHRGPKTSRC 791


>AY787484-1|AAV87217.1|   70|Anopheles gambiae GABA receptor subunit
           protein.
          Length = 70

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 675 WLMRRIVTPSRVGVPLFTSLRXTRSLRNTS 764
           WL R   TP+RVG+ + T L  T  + +T+
Sbjct: 21  WLNRN-ATPARVGLGVTTVLTMTTLMSSTN 49


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 903,726
Number of Sequences: 2352
Number of extensions: 19658
Number of successful extensions: 35
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)