Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_G20
(835 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 149 2e-36
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 149 2e-36
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 148 4e-36
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 146 2e-35
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 134 7e-32
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 119 3e-27
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 73 3e-13
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 73 3e-13
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 73 3e-13
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 70 2e-12
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 64 1e-10
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 61 1e-09
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 61 1e-09
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 61 1e-09
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 57 2e-08
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 57 2e-08
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 57 2e-08
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 56 4e-08
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 56 4e-08
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 55 5e-08
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 55 5e-08
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 55 5e-08
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 55 5e-08
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 55 5e-08
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 55 5e-08
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 55 5e-08
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 53 2e-07
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 53 3e-07
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 53 3e-07
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 52 4e-07
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 52 5e-07
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 52 7e-07
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 52 7e-07
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 50 2e-06
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 50 3e-06
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 50 3e-06
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 48 6e-06
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 48 6e-06
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 48 1e-05
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 48 1e-05
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 47 2e-05
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 47 2e-05
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 46 3e-05
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 46 3e-05
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 46 3e-05
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 45 6e-05
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 45 6e-05
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 45 6e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 45 8e-05
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 44 1e-04
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 44 2e-04
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 44 2e-04
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 43 3e-04
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 42 5e-04
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 42 5e-04
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 42 7e-04
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 41 0.001
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 41 0.001
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 39 0.005
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 39 0.005
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 39 0.005
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 39 0.005
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 39 0.005
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 39 0.005
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 39 0.005
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 38 0.007
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 38 0.007
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 38 0.007
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 38 0.009
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 38 0.009
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 38 0.012
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 37 0.020
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 36 0.027
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 36 0.036
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 35 0.083
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 34 0.14
U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna bi... 34 0.14
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 34 0.14
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 34 0.14
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 33 0.33
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 32 0.44
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 30 2.3
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 30 2.3
Z73427-7|CAA97799.1| 371|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 29 3.1
U55370-7|AAA97998.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.1
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 29 3.1
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 28 7.2
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 28 7.2
AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical ... 28 7.2
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 28 7.2
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 149 bits (362), Expect = 2e-36
Identities = 64/105 (60%), Positives = 82/105 (78%), Gaps = 1/105 (0%)
Frame = +1
Query: 448 NKEMKVNWATSPGNQP-KTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDP 624
++EMKVNWA PG Q K DT+ H H+FVGDLS E++ LREAF PFG++S+ +++RD
Sbjct: 8 DREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDT 67
Query: 625 QTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKP 759
T KSKGY FVS+ K+ +AE AI+ MNGQWLG R+IRTNW+TRKP
Sbjct: 68 NTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP 112
Score = 56.4 bits (130), Expect = 2e-08
Identities = 48/147 (32%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Frame = +1
Query: 436 EWSSNKEMKVNWAT-SPGNQPKTDTSNHHH--------------IFVGDLSPEIETNILR 570
+W + ++ NWAT PG+Q K N ++VG+++ E I R
Sbjct: 96 QWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEI-R 154
Query: 571 EAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNW-- 744
+ FA FG I+ RI K +GYAFV F K A AI MN Q +G + +R +W
Sbjct: 155 QGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 208
Query: 745 --STRKPP--AKGVNEGAPSSKRAKQP 813
T K P + G G SS QP
Sbjct: 209 TGDTGKTPGGSYGYGYGNSSSGGNSQP 235
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 149 bits (362), Expect = 2e-36
Identities = 64/105 (60%), Positives = 82/105 (78%), Gaps = 1/105 (0%)
Frame = +1
Query: 448 NKEMKVNWATSPGNQP-KTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDP 624
++EMKVNWA PG Q K DT+ H H+FVGDLS E++ LREAF PFG++S+ +++RD
Sbjct: 111 DREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDT 170
Query: 625 QTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKP 759
T KSKGY FVS+ K+ +AE AI+ MNGQWLG R+IRTNW+TRKP
Sbjct: 171 NTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP 215
Score = 78.6 bits (185), Expect = 5e-15
Identities = 39/75 (52%), Positives = 50/75 (66%)
Frame = +3
Query: 228 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXX 407
N DE P+TLYVGNLD +VTE F+ TLF QIG V K+I + NDPYAF+EF+ H
Sbjct: 40 NGSDE--PRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQA 97
Query: 408 XXXXXXMNKRVVLEQ 452
MNKR++L++
Sbjct: 98 SQALQTMNKRLLLDR 112
Score = 56.4 bits (130), Expect = 2e-08
Identities = 48/147 (32%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Frame = +1
Query: 436 EWSSNKEMKVNWAT-SPGNQPKTDTSNHHH--------------IFVGDLSPEIETNILR 570
+W + ++ NWAT PG+Q K N ++VG+++ E I R
Sbjct: 199 QWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEI-R 257
Query: 571 EAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNW-- 744
+ FA FG I+ RI K +GYAFV F K A AI MN Q +G + +R +W
Sbjct: 258 QGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 311
Query: 745 --STRKPP--AKGVNEGAPSSKRAKQP 813
T K P + G G SS QP
Sbjct: 312 TGDTGKTPGGSYGYGYGNSSSGGNSQP 338
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
++VG+L + + + F G ++ +++ D + YAFV F A A+Q M
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGS---NDPYAFVEFSDHGQASQALQTM 104
Query: 703 NGQWLGSRSIRTNWS 747
N + L R ++ NW+
Sbjct: 105 NKRLLLDREMKVNWA 119
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 148 bits (359), Expect = 4e-36
Identities = 64/103 (62%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
Frame = +1
Query: 454 EMKVNWATSPGNQP-KTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQT 630
EMKVNWA PG Q K DT+ H H+FVGDLS E++ LREAF PFG++S+ +++RD T
Sbjct: 81 EMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNT 140
Query: 631 LKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKP 759
KSKGY FVS+ K+ +AE AI+ MNGQWLG R+IRTNW+TRKP
Sbjct: 141 TKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP 183
Score = 56.4 bits (130), Expect = 2e-08
Identities = 48/147 (32%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Frame = +1
Query: 436 EWSSNKEMKVNWAT-SPGNQPKTDTSNHHH--------------IFVGDLSPEIETNILR 570
+W + ++ NWAT PG+Q K N ++VG+++ E I R
Sbjct: 167 QWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEI-R 225
Query: 571 EAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNW-- 744
+ FA FG I+ RI K +GYAFV F K A AI MN Q +G + +R +W
Sbjct: 226 QGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 279
Query: 745 --STRKPP--AKGVNEGAPSSKRAKQP 813
T K P + G G SS QP
Sbjct: 280 TGDTGKTPGGSYGYGYGNSSSGGNSQP 306
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = +3
Query: 228 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII 350
N DE P+TLYVGNLD +VTE F+ TLF QIG V K+I
Sbjct: 40 NGSDE--PRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVI 78
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 146 bits (354), Expect = 2e-35
Identities = 63/102 (61%), Positives = 79/102 (77%), Gaps = 1/102 (0%)
Frame = +1
Query: 457 MKVNWATSPGNQP-KTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTL 633
MKVNWA PG Q K DT+ H H+FVGDLS E++ LREAF PFG++S+ +++RD T
Sbjct: 1 MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTT 60
Query: 634 KSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKP 759
KSKGY FVS+ K+ +AE AI+ MNGQWLG R+IRTNW+TRKP
Sbjct: 61 KSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP 102
Score = 56.4 bits (130), Expect = 2e-08
Identities = 48/147 (32%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Frame = +1
Query: 436 EWSSNKEMKVNWAT-SPGNQPKTDTSNHHH--------------IFVGDLSPEIETNILR 570
+W + ++ NWAT PG+Q K N ++VG+++ E I R
Sbjct: 86 QWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEI-R 144
Query: 571 EAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNW-- 744
+ FA FG I+ RI K +GYAFV F K A AI MN Q +G + +R +W
Sbjct: 145 QGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 198
Query: 745 --STRKPP--AKGVNEGAPSSKRAKQP 813
T K P + G G SS QP
Sbjct: 199 TGDTGKTPGGSYGYGYGNSSSGGNSQP 225
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 134 bits (324), Expect = 7e-32
Identities = 64/121 (52%), Positives = 78/121 (64%), Gaps = 4/121 (3%)
Frame = +1
Query: 451 KEMKVNWATSPG----NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 618
KEM V WA P N+ K +TS H H+FVGDL EI++ LREAF FGE+S +I+R
Sbjct: 106 KEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIR 165
Query: 619 DPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSK 798
D T K KGY FVS+ ++ DAE AI MNG WLG R+IRTNW+TRKP G G +
Sbjct: 166 DNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPDEDGERGGDRGDR 225
Query: 799 R 801
R
Sbjct: 226 R 226
Score = 70.9 bits (166), Expect = 1e-12
Identities = 35/68 (51%), Positives = 44/68 (64%)
Frame = +3
Query: 249 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXM 428
P+TL+V NLDP++T+ FL TLF QIG V KII E NDPYAF+EF+ H
Sbjct: 39 PRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQATLALQSH 98
Query: 429 NKRVVLEQ 452
N R +LE+
Sbjct: 99 NGRELLEK 106
Score = 46.8 bits (106), Expect = 2e-05
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Frame = +1
Query: 487 NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 666
NQ D ++ ++VG+++ E I R AF FG I+ R T K +GYAFV F
Sbjct: 249 NQAAADNTS---VYVGNIANLGEDEI-RRAFDRFGPINEVR------TFKIQGYAFVKFE 298
Query: 667 KKADAEAAIQAMNGQWLGSRSIRTNW----STRKPPAKGVNEGAPS 792
K A AI MN +G + +R +W + KP +G G S
Sbjct: 299 TKESAARAIVQMNNADIGGQIVRCSWGKSGDSGKPSERGSGGGGGS 344
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/118 (25%), Positives = 49/118 (41%)
Frame = +1
Query: 448 NKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQ 627
N + A G Q + + + +FV +L P I L F G + +I+ +
Sbjct: 17 NPRVHARIAEREGFQLASGSEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGL 76
Query: 628 TLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKR 801
+ YAFV F A A+Q+ NG+ L + + W+ +P G N P + R
Sbjct: 77 ---NDPYAFVEFSDHNQATLALQSHNGRELLEKEMHVTWAF-EPREPGENRSKPETSR 130
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 119 bits (286), Expect = 3e-27
Identities = 49/95 (51%), Positives = 67/95 (70%)
Frame = +1
Query: 472 ATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYA 651
A+ P + + DTS H H+FVGDLS ++ +L+ F FGE+S +++RD QT KSKGY
Sbjct: 120 ASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYG 179
Query: 652 FVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRK 756
FVSF K +AE AI MNG+W+G R++RTNW+ RK
Sbjct: 180 FVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARK 214
Score = 54.8 bits (126), Expect = 7e-08
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 12/160 (7%)
Frame = +1
Query: 334 KVARLYGSQEMTRMHFSSLXXXXXXXXXXXXXTSEWSSNKEMKVNWATSPGNQPKTDTSN 513
KV R +Q+ F S +W + ++ NWA ++ D
Sbjct: 165 KVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLT 224
Query: 514 HHHIF-----------VGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVS 660
+F VG++S + LR+ F+ +G+I+ RI K++ YAFV
Sbjct: 225 FEQVFNSTKADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRI------FKTQRYAFVR 278
Query: 661 FVKKADAEAAIQAMNGQWLGSRSIRTNWS-TRKPPAKGVN 777
+ KK A AI MNG+ + +R +W T+ P + +N
Sbjct: 279 YEKKECATKAIMEMNGKEMAGNQVRCSWGRTQAVPNQALN 318
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 255 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEF 389
++YVGN+ T+ L LF GD+ +I + YAF+ +
Sbjct: 238 SVYVGNISQQTTDADLRDLFSTYGDIAEVRIFK---TQRYAFVRY 279
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 72.5 bits (170), Expect = 3e-13
Identities = 37/104 (35%), Positives = 55/104 (52%)
Frame = +1
Query: 472 ATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYA 651
A PG + ++VGDL P++ +IL E F+ G + + R+ RD T S GYA
Sbjct: 17 APQPGQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYA 76
Query: 652 FVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEG 783
+V+F + ADAE A+ MN + L + +R WS R P + G
Sbjct: 77 YVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAG 120
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/94 (30%), Positives = 47/94 (50%)
Frame = +1
Query: 451 KEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQT 630
K M++ W+ P S +IF+ +L I+ + + F+ FG I +C++ D
Sbjct: 101 KPMRIMWSQ---RDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDG 157
Query: 631 LKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSI 732
SKGY FV F + A+ AIQ +NG L + +
Sbjct: 158 F-SKGYGFVHFETEEAAQNAIQKVNGMLLAGKKV 190
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +1
Query: 520 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 699
+++V + L + FA FG I++C ++ KSKG+ FV+F +AE A+QA
Sbjct: 214 NVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEG--KSKGFGFVAFANPEEAETAVQA 271
Query: 700 MN 705
++
Sbjct: 272 LH 273
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 72.5 bits (170), Expect = 3e-13
Identities = 37/104 (35%), Positives = 55/104 (52%)
Frame = +1
Query: 472 ATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYA 651
A PG + ++VGDL P++ +IL E F+ G + + R+ RD T S GYA
Sbjct: 17 APQPGQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYA 76
Query: 652 FVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEG 783
+V+F + ADAE A+ MN + L + +R WS R P + G
Sbjct: 77 YVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAG 120
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +1
Query: 520 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 699
+++V + L + FA FG I++C ++ KSKG+ FV+F +AE A+QA
Sbjct: 154 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEG--KSKGFGFVAFANPEEAETAVQA 211
Query: 700 MN 705
++
Sbjct: 212 LH 213
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 72.5 bits (170), Expect = 3e-13
Identities = 37/104 (35%), Positives = 55/104 (52%)
Frame = +1
Query: 472 ATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYA 651
A PG + ++VGDL P++ +IL E F+ G + + R+ RD T S GYA
Sbjct: 17 APQPGQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYA 76
Query: 652 FVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEG 783
+V+F + ADAE A+ MN + L + +R WS R P + G
Sbjct: 77 YVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAG 120
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/94 (30%), Positives = 47/94 (50%)
Frame = +1
Query: 451 KEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQT 630
K M++ W+ P S +IF+ +L I+ + + F+ FG I +C++ D
Sbjct: 101 KPMRIMWSQ---RDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDG 157
Query: 631 LKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSI 732
SKGY FV F + A+ AIQ +NG L + +
Sbjct: 158 F-SKGYGFVHFETEEAAQNAIQKVNGMLLAGKKV 190
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +1
Query: 520 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 699
+++V + L + FA FG I++C ++ KSKG+ FV+F +AE A+QA
Sbjct: 214 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEG--KSKGFGFVAFANPEEAETAVQA 271
Query: 700 MN 705
++
Sbjct: 272 LH 273
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 70.5 bits (165), Expect = 1e-12
Identities = 34/97 (35%), Positives = 54/97 (55%)
Frame = +1
Query: 493 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 672
P T + +++GDL P++ +L E F+ G + + R+ RD + S GYA+V+F +
Sbjct: 49 PPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQP 108
Query: 673 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEG 783
ADAE A+ MN + + R +R WS R P A+ G
Sbjct: 109 ADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGNG 145
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/94 (27%), Positives = 49/94 (52%)
Frame = +1
Query: 451 KEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQT 630
+ M++ W+ P + + +IF+ +L I+ + + F+ FG I +C++ D +
Sbjct: 126 RPMRIMWSQ---RDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEG 182
Query: 631 LKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSI 732
SKGY FV F + A+ AI+ +NG L + +
Sbjct: 183 -NSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKV 215
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = +1
Query: 520 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 699
++FV + ++ L F+ FGEI++ ++ D Q K KG+ FV+F + A A++
Sbjct: 239 NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQG-KPKGFGFVAFADQDAAGQAVEK 297
Query: 700 MN 705
+N
Sbjct: 298 LN 299
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 70.5 bits (165), Expect = 1e-12
Identities = 34/97 (35%), Positives = 54/97 (55%)
Frame = +1
Query: 493 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 672
P T + +++GDL P++ +L E F+ G + + R+ RD + S GYA+V+F +
Sbjct: 49 PPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQP 108
Query: 673 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEG 783
ADAE A+ MN + + R +R WS R P A+ G
Sbjct: 109 ADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGNG 145
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/94 (27%), Positives = 49/94 (52%)
Frame = +1
Query: 451 KEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQT 630
+ M++ W+ P + + +IF+ +L I+ + + F+ FG I +C++ D +
Sbjct: 126 RPMRIMWSQ---RDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEG 182
Query: 631 LKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSI 732
SKGY FV F + A+ AI+ +NG L + +
Sbjct: 183 -NSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKV 215
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = +1
Query: 520 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 699
++FV + ++ L F+ FGEI++ ++ D Q K KG+ FV+F + A A++
Sbjct: 239 NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQG-KPKGFGFVAFADQDAAGQAVEK 297
Query: 700 MN 705
+N
Sbjct: 298 LN 299
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 70.1 bits (164), Expect = 2e-12
Identities = 42/126 (33%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Frame = +1
Query: 451 KEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC-RIVRDPQ 627
K +KVN A++ ++ D + IFVG+L PE++ +L + F+ FG I +I+RD
Sbjct: 82 KPIKVNKASA--HEKNMDVGAN--IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVD 137
Query: 628 TLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSK--R 801
+ SKG+AF++F ++ A++AMNGQ+L +R+I +++ ++ +KG G + +
Sbjct: 138 SGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKR-DSKGERHGTAAERMLA 196
Query: 802 AKQPTF 819
A+ P F
Sbjct: 197 AQNPLF 202
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 70.1 bits (164), Expect = 2e-12
Identities = 42/126 (33%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Frame = +1
Query: 451 KEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC-RIVRDPQ 627
K +KVN A++ ++ D + IFVG+L PE++ +L + F+ FG I +I+RD
Sbjct: 92 KPIKVNKASA--HEKNMDVGAN--IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVD 147
Query: 628 TLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSK--R 801
+ SKG+AF++F ++ A++AMNGQ+L +R+I +++ ++ +KG G + +
Sbjct: 148 SGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKR-DSKGERHGTAAERMLA 206
Query: 802 AKQPTF 819
A+ P F
Sbjct: 207 AQNPLF 212
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +1
Query: 511 NHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAA 690
N +F GDL E+ +L +AF + ++VR+ +T KSKGY FVSF D A
Sbjct: 201 NDFRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRA 260
Query: 691 IQAMNGQWLGSRSIRTNWSTRK 756
++ M+G+++G+R I+ S K
Sbjct: 261 MREMDGKYVGNRPIKLRKSAWK 282
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
I+VG +S EI ++LR AF PFG I + + DP T K +AFV + A A ++M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 703 NGQWLGSRSIRTN 741
NGQ LG R+++ N
Sbjct: 164 NGQMLGGRNLKVN 176
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +1
Query: 502 DTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADA 681
D + ++V + P++ L+ F FGEI C++ R P +G+ ++ F
Sbjct: 202 DAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQ 261
Query: 682 EAAIQAMNGQWLGSRSIRTNWST 750
AI MN LG + +R N++T
Sbjct: 262 SEAIAGMNMFDLGGQYLR-NFTT 283
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +3
Query: 258 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEF 389
+YV ++ P ++E L ++F G++ C++ R P G+ + +LEF
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEF 255
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
I+VG +S EI ++LR AF PFG I + + DP T K +AFV + A A ++M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 703 NGQWLGSRSIRTN 741
NGQ LG R+++ N
Sbjct: 164 NGQMLGGRNLKVN 176
Score = 48.0 bits (109), Expect = 8e-06
Identities = 23/88 (26%), Positives = 38/88 (43%)
Frame = +1
Query: 502 DTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADA 681
D + ++V + P++ L+ F FGEI C++ R P +G+ ++ F
Sbjct: 202 DAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQ 261
Query: 682 EAAIQAMNGQWLGSRSIRTNWSTRKPPA 765
AI MN LG + +R P A
Sbjct: 262 SEAIAGMNMFDLGGQYLRVGKCVTPPDA 289
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +3
Query: 258 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEF 389
+YV ++ P ++E L ++F G++ C++ R P G+ + +LEF
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEF 255
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
I+VG +S EI ++LR AF PFG I + + DP T K +AFV + A A ++M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 703 NGQWLGSRSIRTN 741
NGQ LG R+++ N
Sbjct: 164 NGQMLGGRNLKVN 176
Score = 48.0 bits (109), Expect = 8e-06
Identities = 23/88 (26%), Positives = 38/88 (43%)
Frame = +1
Query: 502 DTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADA 681
D + ++V + P++ L+ F FGEI C++ R P +G+ ++ F
Sbjct: 202 DAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQ 261
Query: 682 EAAIQAMNGQWLGSRSIRTNWSTRKPPA 765
AI MN LG + +R P A
Sbjct: 262 SEAIAGMNMFDLGGQYLRVGKCVTPPDA 289
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +3
Query: 258 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEF 389
+YV ++ P ++E L ++F G++ C++ R P G+ + +LEF
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEF 255
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/65 (36%), Positives = 43/65 (66%)
Frame = +1
Query: 502 DTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADA 681
+ N IFVG L+ +++RE ++ FGEI++ ++RDP T +S+G+ FV+F K +
Sbjct: 18 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEV 77
Query: 682 EAAIQ 696
+AA++
Sbjct: 78 DAAMK 82
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/65 (36%), Positives = 43/65 (66%)
Frame = +1
Query: 502 DTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADA 681
+ N IFVG L+ +++RE ++ FGEI++ ++RDP T +S+G+ FV+F K +
Sbjct: 18 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEV 77
Query: 682 EAAIQ 696
+AA++
Sbjct: 78 DAAMK 82
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/65 (36%), Positives = 43/65 (66%)
Frame = +1
Query: 502 DTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADA 681
+ N IFVG L+ +++RE ++ FGEI++ ++RDP T +S+G+ FV+F K +
Sbjct: 18 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEV 77
Query: 682 EAAIQ 696
+AA++
Sbjct: 78 DAAMK 82
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 56.0 bits (129), Expect = 3e-08
Identities = 38/121 (31%), Positives = 56/121 (46%)
Frame = +1
Query: 448 NKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQ 627
NK +KV++A +P D +++V + + + L F PFG+I RI+ D
Sbjct: 110 NKTIKVSYA-----RPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNV 164
Query: 628 TLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAK 807
T SKG FV F KK +A+ AI+ +NG S + PA +G S A
Sbjct: 165 TGLSKGVGFVRFDKKDEADVAIKTLNGSIPSGCSEQITVKFANNPASNNPKGLLSDLEAV 224
Query: 808 Q 810
Q
Sbjct: 225 Q 225
Score = 54.4 bits (125), Expect = 1e-07
Identities = 23/61 (37%), Positives = 41/61 (67%)
Frame = +1
Query: 565 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNW 744
+R F GEI +C++VRD T +S GY FV++V++ DA A+ + NG L +++I+ ++
Sbjct: 58 VRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSY 117
Query: 745 S 747
+
Sbjct: 118 A 118
Score = 53.6 bits (123), Expect = 2e-07
Identities = 30/89 (33%), Positives = 53/89 (59%)
Frame = +1
Query: 493 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 672
P +DT+ + +FV +LS + + +L + F+ FG I N +I+RD T + KGYAFVS
Sbjct: 367 PPSDTAGYC-LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRD-LTQQCKGYAFVSMSNY 424
Query: 673 ADAEAAIQAMNGQWLGSRSIRTNWSTRKP 759
+A A+ ++NG L ++++ + + P
Sbjct: 425 TEAYNAMLSLNGTNLAGKTLQVVFKSSTP 453
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 237 DESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE 356
D KT L + L +T+ + +LF IG+++ CK++R+
Sbjct: 36 DIGESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRD 76
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 55.6 bits (128), Expect = 4e-08
Identities = 25/73 (34%), Positives = 43/73 (58%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
+FVG++S ++ + +R F+ G + + ++V D +T K KGY F+ F AE AI+ +
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 703 NGQWLGSRSIRTN 741
NG L R +R +
Sbjct: 80 NGYELSGRILRVD 92
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Frame = +1
Query: 529 VGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 708
+ +LS + N LR F +G+I + I RD + +SKG+ FV F ++ DAE A+ +G
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82
Query: 709 QWLGSRSIRTNWSTRKPPA--KGVNEGAPSSKRAKQP 813
+ + R +R + P+ +G G +R++ P
Sbjct: 83 KLVDGRELRVTLAKYDRPSDERGGRGGGGGRRRSRSP 119
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 55.2 bits (127), Expect = 5e-08
Identities = 24/77 (31%), Positives = 47/77 (61%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
++VG++ + + FA G ++N RIV D +T + +G+AFV F ++A A+ A++ +
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQL 67
Query: 703 NGQWLGSRSIRTNWSTR 753
NG R++R N++ +
Sbjct: 68 NGVAFNGRNLRVNYANK 84
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 255 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII--REPGND-PYAFLEFT 392
++YVGN+ TE + F +G V +I+ RE G +AF+EF+
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFS 55
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +1
Query: 499 TDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAD 678
T+ N +F+G LS + LRE FA FG I +C ++RD Q KS+G AFV+F ++
Sbjct: 136 TENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSC 194
Query: 679 AEAAIQAMN 705
A A + M+
Sbjct: 195 AVVATKEMH 203
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +1
Query: 520 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 699
++F+ L + + L FAPFG I + ++ D T SK + FVS+ A AI A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 700 MNGQWLGSRSIR 735
MNG +GS+ ++
Sbjct: 560 MNGFQIGSKRLK 571
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +1
Query: 487 NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 666
++P TD +FVG + + R F +G + +C I+RD T SKG FV+F
Sbjct: 48 SEPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFY 104
Query: 667 KKADAEAAIQAMN 705
+ DA A A++
Sbjct: 105 HRKDAIEAQGALH 117
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +1
Query: 499 TDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAD 678
T+ N +F+G LS + LRE FA FG I +C ++RD Q KS+G AFV+F ++
Sbjct: 136 TENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSC 194
Query: 679 AEAAIQAMN 705
A A + M+
Sbjct: 195 AVVATKEMH 203
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +1
Query: 520 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 699
++F+ L + + L FAPFG I + ++ D T SK + FVS+ A AI A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 700 MNGQWLGSRSIR 735
MNG +GS+ ++
Sbjct: 560 MNGFQIGSKRLK 571
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +1
Query: 487 NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 666
++P TD +FVG + + R F +G + +C I+RD T SKG FV+F
Sbjct: 48 SEPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFY 104
Query: 667 KKADAEAAIQAMN 705
+ DA A A++
Sbjct: 105 HRKDAIEAQGALH 117
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +1
Query: 499 TDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAD 678
T+ N +F+G LS + LRE FA FG I +C ++RD Q KS+G AFV+F ++
Sbjct: 136 TENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSC 194
Query: 679 AEAAIQAMN 705
A A + M+
Sbjct: 195 AVVATKEMH 203
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +1
Query: 520 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 699
++F+ L + + L FAPFG I + ++ D T SK + FVS+ A AI A
Sbjct: 429 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 488
Query: 700 MNGQWLGSRSIR 735
MNG +GS+ ++
Sbjct: 489 MNGFQIGSKRLK 500
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +1
Query: 487 NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 666
++P TD +FVG + + R F +G + +C I+RD T SKG FV+F
Sbjct: 48 SEPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFY 104
Query: 667 KKADAEAAIQAMN 705
+ DA A A++
Sbjct: 105 HRKDAIEAQGALH 117
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +1
Query: 499 TDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAD 678
T+ N +F+G LS + LRE FA FG I +C ++RD Q KS+G AFV+F ++
Sbjct: 136 TENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSC 194
Query: 679 AEAAIQAMN 705
A A + M+
Sbjct: 195 AVVATKEMH 203
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +1
Query: 487 NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 666
++P TD +FVG + + R F +G + +C I+RD T SKG FV+F
Sbjct: 48 SEPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFY 104
Query: 667 KKADAEAAIQAMN 705
+ DA A A++
Sbjct: 105 HRKDAIEAQGALH 117
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = +3
Query: 237 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP--YAFLEFTCHXXXX 410
+ + + L++G L E L +F + G ++ C ++R+ AF+ FT
Sbjct: 137 ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAV 196
Query: 411 XXXXXMNKRVVLEQG 455
M+ +E G
Sbjct: 197 VATKEMHHSQTMELG 211
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +1
Query: 499 TDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAD 678
T+ N +F+G LS + LRE FA FG I +C ++RD Q KS+G AFV+F ++
Sbjct: 136 TENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSC 194
Query: 679 AEAAIQAMN 705
A A + M+
Sbjct: 195 AVVATKEMH 203
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +1
Query: 487 NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 666
++P TD +FVG + + R F +G + +C I+RD T SKG FV+F
Sbjct: 48 SEPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFY 104
Query: 667 KKADAEAAIQAMN 705
+ DA A A++
Sbjct: 105 HRKDAIEAQGALH 117
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +1
Query: 499 TDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAD 678
T+ N +F+G LS + LRE FA FG I +C ++RD Q KS+G AFV+F ++
Sbjct: 136 TENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSC 194
Query: 679 AEAAIQAMN 705
A A + M+
Sbjct: 195 AVVATKEMH 203
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +1
Query: 520 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 699
++F+ L + + L FAPFG I + ++ D T SK + FVS+ A AI A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 700 MNGQWLGSRSIR 735
MNG +GS+ ++
Sbjct: 560 MNGFQIGSKRLK 571
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +1
Query: 487 NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 666
++P TD +FVG + + R F +G + +C I+RD T SKG FV+F
Sbjct: 48 SEPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFY 104
Query: 667 KKADAEAAIQAMN 705
+ DA A A++
Sbjct: 105 HRKDAIEAQGALH 117
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/77 (31%), Positives = 44/77 (57%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
++VG+ + L F+ G+I+N RIV D +T + +G+AF+ F ++ A+ A++ M
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 703 NGQWLGSRSIRTNWSTR 753
NG R +R N + +
Sbjct: 67 NGAEFNGRPLRVNLANK 83
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/82 (28%), Positives = 46/82 (56%)
Frame = +1
Query: 448 NKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQ 627
++E ++N + G+ D +F+G LS + LR+ F FGE++ C ++RDP
Sbjct: 25 HEEARLNADSDDGSHGSQDPGK---MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPA 81
Query: 628 TLKSKGYAFVSFVKKADAEAAI 693
T +++G+ F++FV + + +
Sbjct: 82 TKRARGFGFITFVDPSSVDKVL 103
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +3
Query: 225 ANMGDESH----PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP 359
A+ D SH P +++G L T L FG+ G+V C ++R+P
Sbjct: 32 ADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDP 80
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/82 (28%), Positives = 46/82 (56%)
Frame = +1
Query: 448 NKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQ 627
++E ++N + G+ D +F+G LS + LR+ F FGE++ C ++RDP
Sbjct: 25 HEEARLNADSDDGSHGSQDPGK---MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPA 81
Query: 628 TLKSKGYAFVSFVKKADAEAAI 693
T +++G+ F++FV + + +
Sbjct: 82 TKRARGFGFITFVDPSSVDKVL 103
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +3
Query: 225 ANMGDESH----PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP 359
A+ D SH P +++G L T L FG+ G+V C ++R+P
Sbjct: 32 ADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDP 80
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 52.8 bits (121), Expect = 3e-07
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Frame = +1
Query: 529 VGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 708
+ +LS + N LR F +G+I + I RD + +SKG+ FV F ++ DAE A+ +G
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82
Query: 709 QWLGSRSIRTNWSTRKPPA--KGVNEGAPSSKR-AKQPTFDEV 828
+ + R +R + P+ +G G +R A +P E+
Sbjct: 83 KLVDGRELRVTLAKYDRPSDERGGRGGGGGRRRTAAEPDVAEL 125
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
++VG + ++ +L AF PFG++ I D ++ K +G+ FV F DA AI M
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 703 NGQWLGSRSIRTNWSTRKPP 762
N L ++IR N++ +PP
Sbjct: 73 NESELFGKTIRVNFA--RPP 90
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/94 (30%), Positives = 47/94 (50%)
Frame = +1
Query: 451 KEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQT 630
K M++ W+ P S +IF+ +L I+ + + F+ FG I +C++ D
Sbjct: 38 KPMRIMWSQ---RDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDG 94
Query: 631 LKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSI 732
SKGY FV F + A+ AIQ +NG L + +
Sbjct: 95 F-SKGYGFVHFETEEAAQNAIQKVNGMLLAGKKV 127
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +1
Query: 520 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 699
+++V + L + FA FG I++C ++ KSKG+ FV+F +AE A+QA
Sbjct: 151 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEG--KSKGFGFVAFANPEEAETAVQA 208
Query: 700 MN 705
++
Sbjct: 209 LH 210
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 673 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEG 783
ADAE A+ MN + L + +R WS R P + G
Sbjct: 21 ADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAG 57
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
++VG+ + + L F+ G +SN RIV D +T + +G+AFV F ++A A+ A+
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQF 65
Query: 703 NGQWLGSRSIRTN 741
NG R++R N
Sbjct: 66 NGVDFNGRALRVN 78
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 51.6 bits (118), Expect = 7e-07
Identities = 27/85 (31%), Positives = 48/85 (56%)
Frame = +1
Query: 493 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 672
PK + +FVG+L E++ L+E F+P G+I+ C L KG+AF+ +
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAEC-------YLSGKGFAFLRLDTR 160
Query: 673 ADAEAAIQAMNGQWLGSRSIRTNWS 747
A AE+A +A++G+ + R +R ++
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
I V +LSP + +L AF+ FG++ + D + + G V F +K + A+ A+
Sbjct: 191 IRVKELSPTVSNEMLYHAFSHFGDVERAVHIVDEKG-RPTGEGIVEFERKPNCNEAMAAI 249
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 51.6 bits (118), Expect = 7e-07
Identities = 27/85 (31%), Positives = 48/85 (56%)
Frame = +1
Query: 493 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 672
PK + +FVG+L E++ L+E F+P G+I+ C L KG+AF+ +
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAEC-------YLSGKGFAFLRLDTR 160
Query: 673 ADAEAAIQAMNGQWLGSRSIRTNWS 747
A AE+A +A++G+ + R +R ++
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
I V +LSP + +L AF+ FG++ + D + + G V F +K + A+ A+
Sbjct: 191 IRVKELSPTVSNEMLYHAFSHFGDVERAVHIVDEKG-RPTGEGIVEFERKPNCNEAMAAI 249
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +1
Query: 517 HHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQ 696
H I+VG + ++ + L F G+I + R++ DP + S+GYAFV++ K DA AA +
Sbjct: 200 HEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAK 259
Query: 697 AMNGQWLGS-RSIRTNWS 747
+G + + + ++ N S
Sbjct: 260 TYDGHEISTGKPLKVNVS 277
Score = 33.5 bits (73), Expect = 0.19
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +1
Query: 448 NKEMKVNWATSPGNQPKTDT-SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDP 624
N ++ V+WA +P DT S +++ ++ + L E F + + + V+D
Sbjct: 354 NADVYVDWAEHQ-EEPDEDTMSKVKVLYIRNIKEAVTEEKLNELFKEYASLDRVKKVKD- 411
Query: 625 QTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPP 762
YAF+ F ++ D A++ NG+ L + S KPP
Sbjct: 412 -------YAFIHFNERDDCLKAMEEWNGKELEGTVVEA--SLAKPP 448
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = +3
Query: 228 NMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII 350
N DE P+TLYVGNLD +VTE F+ TLF QIG V K+I
Sbjct: 40 NGSDE--PRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVI 78
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
I++G LS + + F+ +GE+ N ++RD T KSKG+AF+ + + A+
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 703 NGQWLGSRSIRTN 741
NG L R IR +
Sbjct: 100 NGISLHKRMIRVD 112
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 258 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCH 398
+Y+G L +++E + +F Q G+V +IR+ F C+
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCY 86
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 48.4 bits (110), Expect = 6e-06
Identities = 31/117 (26%), Positives = 56/117 (47%)
Frame = +1
Query: 442 SSNKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRD 621
++++ +K N ++ GN+ K IFVG +SPE+ L F +GE++ ++ D
Sbjct: 11 NASETIKENGHSTKGNEDKK-------IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYD 63
Query: 622 PQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPS 792
+S+G+AFV F + A+ A Q + +S+ + + K G PS
Sbjct: 64 RTNGRSRGFAFVEFTTGEGCKLALAARE-QTIKGKSVEVKPAKSRENKKVFVGGLPS 119
Score = 36.3 bits (80), Expect = 0.027
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
+FVG L + LR F FG++ + D QT + +AF+ F ++ A+ A +
Sbjct: 112 VFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA-SSQ 170
Query: 703 NGQWLGSR 726
Q G+R
Sbjct: 171 TKQTFGTR 178
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 252 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEFT 392
K ++VG + P V L + F Q G+V ++ + N +AF+EFT
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFT 78
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 48.4 bits (110), Expect = 6e-06
Identities = 31/117 (26%), Positives = 56/117 (47%)
Frame = +1
Query: 442 SSNKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRD 621
++++ +K N ++ GN+ K IFVG +SPE+ L F +GE++ ++ D
Sbjct: 11 NASETIKENGHSTKGNEDKK-------IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYD 63
Query: 622 PQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPS 792
+S+G+AFV F + A+ A Q + +S+ + + K G PS
Sbjct: 64 RTNGRSRGFAFVEFTTGEGCKLALAARE-QTIKGKSVEVKPAKSRENKKVFVGGLPS 119
Score = 36.3 bits (80), Expect = 0.027
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
+FVG L + LR F FG++ + D QT + +AF+ F ++ A+ A +
Sbjct: 112 VFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA-SSQ 170
Query: 703 NGQWLGSR 726
Q G+R
Sbjct: 171 TKQTFGTR 178
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 252 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEFT 392
K ++VG + P V L + F Q G+V ++ + N +AF+EFT
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFT 78
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/72 (34%), Positives = 41/72 (56%)
Frame = +1
Query: 520 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 699
++F+ L E L + FAPFG I + ++ D T +SK + FVS+ ++AAI A
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 700 MNGQWLGSRSIR 735
MNG +G + ++
Sbjct: 490 MNGFQIGMKRLK 501
Score = 44.4 bits (100), Expect = 1e-04
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = +1
Query: 448 NKEMKVNWATSPGN--QPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRD 621
N+ M+V A + PK D + +F+G LS + + +R FA FGE+ ++R
Sbjct: 100 NRAMQVKPADTDSRPASPK-DKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRG 158
Query: 622 PQTLKSKGYAFVSFVKKADAEAAIQAMNG 708
SKG AFV + DA AI A++G
Sbjct: 159 ADG-ASKGCAFVKYKHGLDAHMAISALHG 186
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADA 681
+FVG + +E LR F FG+I I++D T KG AF+++ + A
Sbjct: 31 LFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSA 83
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/72 (34%), Positives = 41/72 (56%)
Frame = +1
Query: 520 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 699
++F+ L E L + FAPFG I + ++ D T +SK + FVS+ ++AAI A
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 700 MNGQWLGSRSIR 735
MNG +G + ++
Sbjct: 490 MNGFQIGMKRLK 501
Score = 44.4 bits (100), Expect = 1e-04
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = +1
Query: 448 NKEMKVNWATSPGN--QPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRD 621
N+ M+V A + PK D + +F+G LS + + +R FA FGE+ ++R
Sbjct: 100 NRAMQVKPADTDSRPASPK-DKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRG 158
Query: 622 PQTLKSKGYAFVSFVKKADAEAAIQAMNG 708
SKG AFV + DA AI A++G
Sbjct: 159 ADG-ASKGCAFVKYKHGLDAHMAISALHG 186
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADA 681
+FVG + +E LR F FG+I I++D T KG AF+++ + A
Sbjct: 31 LFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSA 83
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/75 (34%), Positives = 38/75 (50%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
+FV L+P L F+ FG+I+NC IVRD ++ S YAF+ F E A M
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 703 NGQWLGSRSIRTNWS 747
+ + R I ++S
Sbjct: 303 DNVLIDDRRIHVDFS 317
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +3
Query: 237 DESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEF 389
DE P+ L+V L+P T+ L +F + G + C+I+R+ G+ YAF+EF
Sbjct: 235 DEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/75 (34%), Positives = 38/75 (50%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
+FV L+P L F+ FG+I+NC IVRD ++ S YAF+ F E A M
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 703 NGQWLGSRSIRTNWS 747
+ + R I ++S
Sbjct: 303 DNVLIDDRRIHVDFS 317
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +3
Query: 237 DESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEF 389
DE P+ L+V L+P T+ L +F + G + C+I+R+ G+ YAF+EF
Sbjct: 235 DEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/75 (34%), Positives = 38/75 (50%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
+FV L+P L F+ FG+I+NC IVRD ++ S YAF+ F E A M
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 703 NGQWLGSRSIRTNWS 747
+ + R I ++S
Sbjct: 234 DNVLIDDRRIHVDFS 248
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +3
Query: 237 DESHPKT-LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE--PGND-PYAFLEF 389
DE P+ L+V L+P T+ L +F + G + C+I+R+ G+ YAF+EF
Sbjct: 166 DEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 220
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +1
Query: 520 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 699
++F+ L + + L FAPFG I + ++ D T SK + FVS+ A AI A
Sbjct: 336 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 395
Query: 700 MNGQWLGSRSIR 735
MNG +GS+ ++
Sbjct: 396 MNGFQIGSKRLK 407
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
IFVG L L E F FG+I ++ D T KS+GY FV+ +A AE A +
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDP 96
Query: 703 N 705
N
Sbjct: 97 N 97
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +1
Query: 475 TSP-GNQPKTDTS--NHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 645
T+P G+Q D++ + ++++ L P ++LRE + +G I++ + + D T KG
Sbjct: 64 TAPRGDQQHHDSTPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKG 123
Query: 646 YAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKP 759
Y FV F A AA+ +N + + ++ + + P
Sbjct: 124 YGFVDFESPQAAAAAVDGLNTEGVQAQMAKLQQQEQDP 161
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +1
Query: 520 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 699
++++ +L + +L FG + + RI+R P +S+G F K E I A
Sbjct: 163 NLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDN-QSRGVGFARMDSKEKCEVIISA 221
Query: 700 MNG 708
+NG
Sbjct: 222 LNG 224
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 240 ESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN 365
E P LY+ NL TE L T + G V +I+R P N
Sbjct: 158 EQDPTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDN 199
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/44 (40%), Positives = 33/44 (75%)
Frame = +1
Query: 565 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQ 696
+RE ++ FGEI++ ++RDP T +S+G+ FV+F K + +AA++
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 44
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/44 (40%), Positives = 33/44 (75%)
Frame = +1
Query: 565 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQ 696
+RE ++ FGEI++ ++RDP T +S+G+ FV+F K + +AA++
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 44
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/85 (24%), Positives = 42/85 (49%)
Frame = +1
Query: 505 TSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAE 684
T + ++++ L P ++LRE + +G I++ + + D T KGY FV F A
Sbjct: 103 TPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAA 162
Query: 685 AAIQAMNGQWLGSRSIRTNWSTRKP 759
AA+ +N + + ++ + + P
Sbjct: 163 AAVDGLNTEGVQAQMAKLQQQEQDP 187
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +1
Query: 520 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 699
++++ +L + +L FG + + RI+R P +S+G F K E I A
Sbjct: 189 NLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDN-QSRGVGFARMDSKEKCEVIISA 247
Query: 700 MNG 708
+NG
Sbjct: 248 LNG 250
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 240 ESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN 365
E P LY+ NL TE L T + G V +I+R P N
Sbjct: 184 EQDPTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDN 225
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +1
Query: 478 SPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFV 657
+P P+ + +FVG ++ E + LR F +G+I +V D + K +GYAF+
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFI 149
Query: 658 SFVKKADAEAAIQAMNG 708
+ KA+ A + +G
Sbjct: 150 EYSDKAEMHTAYKKADG 166
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 45.2 bits (102), Expect = 6e-05
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAI--- 693
+F+G LS + L F+ +G + + ++RDP T S+G+ FV+F AE+A+
Sbjct: 51 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDR 110
Query: 694 -QAMNGQWLGS-RSI-RTNWSTRKPPAKGVNEGAPSSK 798
+ G+ + S R+I R S+ PP + AP K
Sbjct: 111 PHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCK 148
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 45.2 bits (102), Expect = 6e-05
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAI--- 693
+F+G LS + L F+ +G + + ++RDP T S+G+ FV+F AE+A+
Sbjct: 71 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDR 130
Query: 694 -QAMNGQWLGS-RSI-RTNWSTRKPPAKGVNEGAPSSK 798
+ G+ + S R+I R S+ PP + AP K
Sbjct: 131 PHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCK 168
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 45.2 bits (102), Expect = 6e-05
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAI--- 693
+F+G LS + L F+ +G + + ++RDP T S+G+ FV+F AE+A+
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDR 131
Query: 694 -QAMNGQWLGS-RSI-RTNWSTRKPPAKGVNEGAPSSK 798
+ G+ + S R+I R S+ PP + AP K
Sbjct: 132 PHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCK 169
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.8 bits (101), Expect = 8e-05
Identities = 26/88 (29%), Positives = 42/88 (47%)
Frame = +1
Query: 484 GNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 663
G Q + S+ + V +L E+ + LR+ F G + I RD T KG+AFV+F
Sbjct: 165 GRQIDRNRSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTF 224
Query: 664 VKKADAEAAIQAMNGQWLGSRSIRTNWS 747
+ DA AI +N + ++ W+
Sbjct: 225 ESRDDAARAIAELNDIRMYHMVLKVEWT 252
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +1
Query: 487 NQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFV 666
++P TD +FVG + + R F +G + +C I+RD T SKG FV+F
Sbjct: 48 SEPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFY 104
Query: 667 KKADAEAAIQAMN 705
+ DA A A++
Sbjct: 105 HRKDAIEAQGALH 117
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +1
Query: 499 TDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 645
T+ N +F+G LS + LRE FA FG I +C ++RD Q KS+G
Sbjct: 136 TENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRG 183
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/53 (20%), Positives = 23/53 (43%)
Frame = +3
Query: 237 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTC 395
+ + + L++G L E L +F + G ++ C ++R+ L C
Sbjct: 137 ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGMLSAAC 189
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/86 (29%), Positives = 45/86 (52%)
Frame = +1
Query: 478 SPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFV 657
+PGN+ T H+ V +L P+I+ ++R+ F FG I + D +++G+A +
Sbjct: 120 APGNKGPT------HVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVD-SNRENRGFATI 172
Query: 658 SFVKKADAEAAIQAMNGQWLGSRSIR 735
+F DA+ + + +N L R IR
Sbjct: 173 TFRNADDAQKSCEQLNNFELAGRCIR 198
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 565 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWL 717
L E F+ G + + RI+ D +T +SKG +V F + + A+NGQ L
Sbjct: 41 LEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGL-ALNGQRL 90
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/86 (29%), Positives = 45/86 (52%)
Frame = +1
Query: 478 SPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFV 657
+PGN+ T H+ V +L P+I+ ++R+ F FG I + D +++G+A +
Sbjct: 265 APGNKGPT------HVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVD-SNRENRGFATI 317
Query: 658 SFVKKADAEAAIQAMNGQWLGSRSIR 735
+F DA+ + + +N L R IR
Sbjct: 318 TFRNADDAQKSCEQLNNFELAGRCIR 343
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 565 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWL 717
L E F+ G + + RI+ D +T +SKG +V F + + A+NGQ L
Sbjct: 186 LEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGL-ALNGQRL 235
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/76 (34%), Positives = 37/76 (48%)
Frame = +1
Query: 529 VGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 708
V +LS LR+ F FGEI+ C +V D + S+G+ F+ F DA AA +
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCN 139
Query: 709 QWLGSRSIRTNWSTRK 756
L IR ++S K
Sbjct: 140 TDLDGHKIRVDFSLTK 155
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAF-APFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAI 693
IFVG+L EI + L F A G + RIVRD T K KG+AFV+F + + A+
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL 305
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 258 LYVGNLDPSVTEVFLCTLF-GQIGDVKGCKIIREPGNDP---YAFLEF 389
++VGNL +TE L T F QIG V+ +I+R+ +AF+ F
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNF 295
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 42.7 bits (96), Expect = 3e-04
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Frame = +1
Query: 460 KVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGE-ISNCRIVRDPQTLK 636
KVN+A + SN ++FV +S ++ L +AF + + C +
Sbjct: 77 KVNFAKKEPKPAENVMSNISNVFVRGISRDMPDTELYQAFGGITDGVVQCHV-------- 128
Query: 637 SKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPT 816
+ GY FV F +A+A+ I M+G+ L + I +W+ +P G P S+ + P+
Sbjct: 129 ADGYGFVLFDTRANAQKKIVEMDGKTLNGKLISVSWA--RPDTVGRKRKRPMSEESPTPS 186
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/100 (26%), Positives = 45/100 (45%)
Frame = +1
Query: 475 TSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAF 654
T P + + V ++ L+ F FG +S+ I+ + + SKG+ F
Sbjct: 139 TQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGF 196
Query: 655 VSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGV 774
V+ + DAE A Q ++G + R I N +T + +K V
Sbjct: 197 VTMERPQDAERARQELHGSMIEGRKIEVNCATARVHSKKV 236
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/100 (26%), Positives = 45/100 (45%)
Frame = +1
Query: 475 TSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAF 654
T P + + V ++ L+ F FG +S+ I+ + + SKG+ F
Sbjct: 139 TQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGF 196
Query: 655 VSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGV 774
V+ + DAE A Q ++G + R I N +T + +K V
Sbjct: 197 VTMERPQDAERARQELHGSMIEGRKIEVNCATARVHSKKV 236
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +1
Query: 577 FAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 708
F FG + R+ R+ +T KG+A+V F KA AE A ++MNG
Sbjct: 52 FRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESMNG 95
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/74 (27%), Positives = 39/74 (52%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
+FV ++ E + + + F+ +G+I N + D +T KGYA V + + +A AI
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 703 NGQWLGSRSIRTNW 744
N L ++++ +W
Sbjct: 117 NDTDLLGQNVKVDW 130
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/78 (29%), Positives = 41/78 (52%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
+FVG+L +++N L++ F PF +++ C IV K YAFV +++ D + I +
Sbjct: 5 LFVGNLPDNVDSNKLKQVFQPFCKVTECDIV--------KNYAFV-HIEEDDVDPIITRL 55
Query: 703 NGQWLGSRSIRTNWSTRK 756
G + + + ST K
Sbjct: 56 TGYTIDGKVVNIKKSTSK 73
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/78 (29%), Positives = 41/78 (52%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
+FVG+L +++N L++ F PF +++ C IV K YAFV +++ D + I +
Sbjct: 5 LFVGNLPDNVDSNKLKQVFQPFCKVTECDIV--------KNYAFV-HIEEDDVDPIITRL 55
Query: 703 NGQWLGSRSIRTNWSTRK 756
G + + + ST K
Sbjct: 56 TGYTIDGKVVNIKKSTSK 73
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/87 (31%), Positives = 42/87 (48%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
I++G L+ + + F +G+I RD L G+ FV F K DAE A+ +
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQI------RD--VLLKNGFGFVEFDDKRDAEDAVHDL 56
Query: 703 NGQWLGSRSIRTNWSTRKPPAKGVNEG 783
NG+ LG + ++S KP G + G
Sbjct: 57 NGKELGGERVILDYS--KPRGGGGDRG 81
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/87 (31%), Positives = 42/87 (48%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
I++G L+ + + F +G+I RD L G+ FV F K DAE A+ +
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQI------RD--VLLKNGFGFVEFDDKRDAEDAVHDL 56
Query: 703 NGQWLGSRSIRTNWSTRKPPAKGVNEG 783
NG+ LG + ++S KP G + G
Sbjct: 57 NGKELGGERVILDYS--KPRGGGGDRG 81
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/87 (31%), Positives = 42/87 (48%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
I++G L+ + + F +G+I RD L G+ FV F K DAE A+ +
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQI------RD--VLLKNGFGFVEFDDKRDAEDAVHDL 56
Query: 703 NGQWLGSRSIRTNWSTRKPPAKGVNEG 783
NG+ LG + ++S KP G + G
Sbjct: 57 NGKELGGERVILDYS--KPRGGGGDRG 81
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/86 (29%), Positives = 41/86 (47%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
+F+ +L + + L+ F +GE+S ++V D +T KG+A V FV A AA A+
Sbjct: 281 LFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSAL 340
Query: 703 NGQWLGSRSIRTNWSTRKPPAKGVNE 780
+G R + K +G E
Sbjct: 341 DGYVFKGRMMHILPGDEKRTKEGEEE 366
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 38.7 bits (86), Expect = 0.005
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Frame = +1
Query: 433 SEWSSNKEMKVNWATSPGNQPKTDTS--NHHHIFVGDLSPEIETNILREAFAPFGEISNC 606
SE + E +P Q KTD S +F+ +LS + + +++E + FG+I
Sbjct: 233 SEDDEDDEEPAKKPKNPKAQLKTDESITEGKVVFLRNLSYDTKEELIKEELSKFGKIDLA 292
Query: 607 RIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM-NGQWLGSRSIRTN 741
I + + SKG AFV F +A I+ + +G + +R ++ N
Sbjct: 293 IICKYKDSGHSKGTAFVHFSTPIEASNCIEGVEDGVIIDNRLVKAN 338
Score = 35.9 bits (79), Expect = 0.036
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 616 RDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRK 756
+DP+T G+ F+ FV+KADAE + N + RS+ +W+ K
Sbjct: 131 KDPKTCA--GFGFIQFVEKADAEKGREFFNTNKVLGRSVAADWALDK 175
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
IF+G L + + ++E FG + + D Q SKGYAF ++ + AI +
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQG-NSKGYAFAEYLDPTLTDQAIAGL 351
Query: 703 NGQWLGSRSI 732
NG LG + +
Sbjct: 352 NGMQLGDKQL 361
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1
Query: 493 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 672
PK + +FVG+L E++ L+E F+P G+I+ C L KG+AF+ +
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAEC-------YLSGKGFAFLRLISN 160
Query: 673 A 675
A
Sbjct: 161 A 161
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/100 (26%), Positives = 45/100 (45%)
Frame = +1
Query: 472 ATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYA 651
A + Q KTD + ++VG++ + + + E FA G+++ I +D T K +A
Sbjct: 34 APTAEEQEKTDARS---VYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFA 90
Query: 652 FVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKG 771
FV F K + A+ ++G +R I P G
Sbjct: 91 FVEFQKLESVQLAL-VLSGTMFRNRKIMVTLKRTNKPGMG 129
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
IF+G L + + ++E FG + + D Q SKGYAF ++ + AI +
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQG-NSKGYAFAEYLDPTLTDQAIAGL 351
Query: 703 NGQWLGSRSI 732
NG LG + +
Sbjct: 352 NGMQLGDKQL 361
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
IF+G L + + ++E FG + + D Q SKGYAF ++ + AI +
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQG-NSKGYAFAEYLDPTLTDQAIAGL 326
Query: 703 NGQWLGSRSI 732
NG LG + +
Sbjct: 327 NGMQLGDKQL 336
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
IF+G L + + ++E FG + + D Q SKGYAF ++ + AI +
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQG-NSKGYAFAEYLDPTLTDQAIAGL 329
Query: 703 NGQWLGSRSI 732
NG LG + +
Sbjct: 330 NGMQLGDKQL 339
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
++VG L + + L E F FG I + R P G+AFV + DAE A++A+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP-----GFAFVEYDDVRDAEDAVRAL 59
Query: 703 NGQWLGSRSIRTNWST 750
+G + R ST
Sbjct: 60 DGSRICGVRARVELST 75
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
++VG L + + L E F FG I + R P G+AFV + DAE A++A+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP-----GFAFVEYDDVRDAEDAVRAL 59
Query: 703 NGQWLGSRSIRTNWST 750
+G + R ST
Sbjct: 60 DGSRICGVRARVELST 75
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
++VG L + + L E F FG I + R P G+AFV + DAE A++A+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP-----GFAFVEYDDVRDAEDAVRAL 59
Query: 703 NGQWLGSRSIRTNWST 750
+G + R ST
Sbjct: 60 DGSRICGVRARVELST 75
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = +3
Query: 255 TLYVGNLDPS----VTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFT 392
TLY+GNL PS VTE L F Q GD++ +++ E G AF+EFT
Sbjct: 236 TLYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTEKG---CAFIEFT 282
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 37.9 bits (84), Expect = 0.009
Identities = 25/93 (26%), Positives = 41/93 (44%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
+F+G++ + E F G+I I +D T K K +A++ F + E A+ M
Sbjct: 57 VFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VM 115
Query: 703 NGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKR 801
NG SR I + ++ G+ G S R
Sbjct: 116 NGSLFRSRPIVV--TAKRTNIPGMGHGVRGSSR 146
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 37.5 bits (83), Expect = 0.012
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
++VG+LS + + + E F G++ + D G+ FV + + DAE A+Q +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELALQNI 98
Query: 703 NGQWLGSRSIRTNW 744
+ + R IR +W
Sbjct: 99 SNTRMDDRVIRADW 112
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 255 TLYVGNLDPSVTEVFLCTLFGQIGDVK 335
TLYVGNL E + LFG+ GDV+
Sbjct: 38 TLYVGNLSYYTKEDQVYELFGRAGDVR 64
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 36.7 bits (81), Expect = 0.020
Identities = 25/97 (25%), Positives = 44/97 (45%)
Frame = +1
Query: 508 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEA 687
S ++VG+L ++ + + F +G I D ++ + +AFV F DAE
Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHRDAED 61
Query: 688 AIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSK 798
A++A +G R IR ++ +GV PS +
Sbjct: 62 AVRARDGYEFDGRRIRVEFT------RGVGPRGPSGR 92
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 243 SHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCH 398
S + +YVGNL V E + +F + G +K I + G P +AF+EF H
Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI--KSGRGPAFAFVEFEDH 56
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 36.3 bits (80), Expect = 0.027
Identities = 21/80 (26%), Positives = 38/80 (47%)
Frame = +1
Query: 508 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEA 687
S ++VG+L ++ + + F +G I D ++ + +AFV F DAE
Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHRDAED 61
Query: 688 AIQAMNGQWLGSRSIRTNWS 747
A++A +G R IR ++
Sbjct: 62 AVRARDGYEFDGRRIRVEFT 81
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 243 SHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCH 398
S + +YVGNL V E + +F + G +K I + G P +AF+EF H
Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI--KSGRGPAFAFVEFEDH 56
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 35.9 bits (79), Expect = 0.036
Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Frame = +1
Query: 478 SPGNQPKT-DTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDP-QTLKSKGYA 651
SP P S + + +LS + L E F+ +G I N + D +GY
Sbjct: 119 SPRRSPAARSASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYG 178
Query: 652 FVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQP 813
+V + DAE +I+ M+G + ++ + + +P +R+ P
Sbjct: 179 YVEYDNLEDAEKSIKHMDGGQIDGMAVHVEMTIGRQSVPFQRRSSPFRRRSPPP 232
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 34.7 bits (76), Expect = 0.083
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
IF+ +L+ + T+ L E F G+I+ D + KSKG + + +A A+ +
Sbjct: 190 IFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEG-KSKGVCVIQYTHPIEAVQAVSML 248
Query: 703 NGQWLGSRSI 732
NGQ L R++
Sbjct: 249 NGQRLFDRNL 258
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 33.9 bits (74), Expect = 0.14
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
+++G L + F +G++S+ + G+ FV F + DA+ A+ +
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSD--------VIMKNGFGFVDFQDQRDADDAVHDL 55
Query: 703 NGQWLGSRSIRTNWSTRKPPAKGVN-EGAPSSKRAKQPTF 819
NG+ L + + RK G N E + S R ++PTF
Sbjct: 56 NGKELCGERVILEFPRRK---VGYNEERSGSGFRGREPTF 92
>U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 2 protein.
Length = 206
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREA----FAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAA 690
+++ +L+ +I+ + LR++ F FGEI + R TLK +G A V F + A AA
Sbjct: 10 LYINNLNEKIKIDELRKSLVAVFKQFGEIVSVMCFR---TLKMRGQAHVIFKELPAASAA 66
Query: 691 IQAMNG 708
+A+NG
Sbjct: 67 REALNG 72
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +1
Query: 517 HHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQ 696
+ IFVG LRE F F + + ++V+ +SKGY F++F + AE I+
Sbjct: 66 NRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDG-QSKGYGFITFETEDQAE-EIR 123
Query: 697 AMNGQWLGSRSIRTN 741
+ + L RS + N
Sbjct: 124 KLTPKQLEFRSRKLN 138
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +1
Query: 517 HHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQ 696
+ IFVG LRE F F + + ++V+ +SKGY F++F + AE I+
Sbjct: 67 NRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDG-QSKGYGFITFETEDQAE-EIR 124
Query: 697 AMNGQWLGSRSIRTN 741
+ + L RS + N
Sbjct: 125 KLTPKQLEFRSRKLN 139
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 610 IVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTN 741
+V D + KG+A+V+F + AI +NG G+R ++ N
Sbjct: 43 LVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVN 86
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 32.3 bits (70), Expect = 0.44
Identities = 19/68 (27%), Positives = 37/68 (54%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
+++ +L +I T + E F FG + R +R T +++G AFV + DA+ A + +
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAV---RQIRVGNTAETRGTAFVVYEDIFDAKTACEHL 77
Query: 703 NGQWLGSR 726
+G + +R
Sbjct: 78 SGYNVSNR 85
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 31.5 bits (68), Expect = 0.77
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
++VG++ + + F G +S I D + KG+A+V F +K + A+ AM
Sbjct: 80 VYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNAL-AM 138
Query: 703 NGQWLGSRSIRTN-WSTRKPPAKGVN 777
L R I+ + T KP N
Sbjct: 139 TDSLLRGRQIKVDPKRTNKPGMSTTN 164
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/86 (22%), Positives = 37/86 (43%)
Frame = +1
Query: 499 TDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAD 678
+ T + V ++ + L F G + + I+ + + SKG+ FV+ D
Sbjct: 94 SSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG--SKGFGFVTMQNPDD 151
Query: 679 AEAAIQAMNGQWLGSRSIRTNWSTRK 756
A+ A NG + R + N +T++
Sbjct: 152 ADRARAEFNGTTIEGRRVEVNLATQR 177
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/86 (22%), Positives = 37/86 (43%)
Frame = +1
Query: 499 TDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAD 678
+ T + V ++ + L F G + + I+ + + SKG+ FV+ D
Sbjct: 94 SSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG--SKGFGFVTMQNPDD 151
Query: 679 AEAAIQAMNGQWLGSRSIRTNWSTRK 756
A+ A NG + R + N +T++
Sbjct: 152 ADRARAEFNGTTIEGRRVEVNLATQR 177
>Z73427-7|CAA97799.1| 371|Caenorhabditis elegans Hypothetical
protein F58B3.7 protein.
Length = 371
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 565 LREAFAPFGEISNCRI-VRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSI 732
++E G++ N + V + Q + FV F A A A MNG++ G RS+
Sbjct: 300 IKEEMEKCGQVVNVIVHVDESQEEDRQVRVFVEFTNNAQAIKAFVMMNGRFFGGRSV 356
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 637 SKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRK 756
SKG+ FV+ DA+ A NG + R + N +T++
Sbjct: 20 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59
>U55370-7|AAA97998.2| 388|Caenorhabditis elegans Hypothetical
protein K03B4.1 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 237 DESH-PKTLYVGNLDPSVTEVFLCTLFGQ 320
D SH P T VGN P++T FL T FG+
Sbjct: 193 DSSHFPLTYLVGNSLPAITSPFLKTSFGE 221
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 237 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII 350
D+ + +YV N+ SVTE L FG G + KI+
Sbjct: 195 DDPYTTNVYVSNIPHSVTEDDLLFTFGSFGPLAALKIL 232
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 523 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAM 702
+++GD+ + L + F G + ++ R + KGY F+ F+ +A + +
Sbjct: 70 LWIGDVPTDWTEETLSQVFTECGH-APYKVKRVYVKDELKGYCFIEFITFDEARQTLYDL 128
Query: 703 NGQWL-GSRSIRTN 741
NG + G + IR N
Sbjct: 129 NGNRIPGFKDIRFN 142
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 565 LREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQ 696
L F +G I + + DP T +G+A ++F K A AI+
Sbjct: 41 LEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIE 84
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
K04G2.8b protein.
Length = 1188
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +1
Query: 703 NGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVII 834
NG + +I T ++ +KPP G N G S++++ P ++++
Sbjct: 1142 NGSPIAKSAIVTPYNYQKPPFTGRNNGEMSNEKSVTPNPKQMLV 1185
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
K04G2.8a protein.
Length = 1186
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +1
Query: 703 NGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVII 834
NG + +I T ++ +KPP G N G S++++ P ++++
Sbjct: 1140 NGSPIAKSAIVTPYNYQKPPFTGRNNGEMSNEKSVTPNPKQMLV 1183
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 643 GYAFVSFVKKADAEAAIQAMNGQWLGSRSI 732
G +V F+K+ DAE A +N +W + I
Sbjct: 120 GNVYVKFMKEEDAEKAKNDLNNRWFNGQPI 149
>AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical
protein F40G9.12 protein.
Length = 230
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 642 GLCFCIICKESRCRSCHPGNE 704
G C CKE C++C P NE
Sbjct: 111 GKSVCEDCKEHECKACEPPNE 131
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +1
Query: 703 NGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVII 834
NG + +I T ++ +KPP G N G S++++ P ++++
Sbjct: 1140 NGSPIAKSAIVTPYNYQKPPFTGRNNGEMSNEKSVTPNPKQMLV 1183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,096,974
Number of Sequences: 27780
Number of extensions: 405686
Number of successful extensions: 1334
Number of sequences better than 10.0: 113
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1295
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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