BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_G18
(891 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ000675-1|CAA04232.1| 600|Anopheles gambiae infection responsi... 25 4.1
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 23 9.4
>AJ000675-1|CAA04232.1| 600|Anopheles gambiae infection responsive
serine proteaselike protein protein.
Length = 600
Score = 24.6 bits (51), Expect = 4.1
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 382 SGVHQINILDEE-GWASLRRARRADPAASVAPLLAIQLSHPGSY 510
S H++ I E+ G S+ + R P+A + + ++L+HP Y
Sbjct: 399 SSTHEMAIPREDIGVKSVHQHPRYSPSALLNNIAVLELAHPVQY 442
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 23.4 bits (48), Expect = 9.4
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 271 PENYGLYAEVDGKSLTAARIGENKYQISWTEE 366
PEN G +A K++ +GE Q W E
Sbjct: 53 PENNGRWAFSSCKAVAVVAVGELPIQRVWCSE 84
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,541
Number of Sequences: 2352
Number of extensions: 13242
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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