Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_G15
         (933 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0060 + 17576427-17578781                                         29   4.0  
08_01_0171 - 1447782-1447935,1448016-1448480,1448578-1450004           29   7.0  
08_01_0170 - 1440908-1441072,1441539-1441581,1442155-1442619,144...    29   7.0  
05_05_0165 + 22851863-22852566,22852811-22852964,22853112-228532...    29   7.0  

>05_04_0060 + 17576427-17578781
          Length = 784

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 187 SFISGPGSGGGANQRTAPQWMLPLLLGLYGSVTSALKRG 303
           SF+ G G GGG  +R +P  +     G+     + L RG
Sbjct: 77  SFLPGGGGGGGGEERASPTRIRHSYTGVVSGFAATLTRG 115


>08_01_0171 - 1447782-1447935,1448016-1448480,1448578-1450004
          Length = 681

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 7/31 (22%)
 Frame = -1

Query: 171 YQLTFWFFSSSRSFLQK-------PRPPKKP 100
           +QLT W+F SS SF QK       P PP  P
Sbjct: 253 HQLTSWYFKSSSSFEQKLAAKVASPPPPSSP 283


>08_01_0170 -
           1440908-1441072,1441539-1441581,1442155-1442619,
           1442714-1444149
          Length = 702

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 7/31 (22%)
 Frame = -1

Query: 171 YQLTFWFFSSSRSFLQK-------PRPPKKP 100
           +QLT W+F SS SF QK       P PP  P
Sbjct: 256 HQLTSWYFKSSSSFEQKLAAKVASPPPPSSP 286


>05_05_0165 +
           22851863-22852566,22852811-22852964,22853112-22853261,
           22853769-22853930,22854070-22854242,22854330-22854396,
           22854556-22854722,22855216-22855374,22856187-22856276,
           22856392-22856483,22856587-22856681,22857328-22857405,
           22858364-22858459,22859132-22859206,22859290-22859381,
           22859462-22859624,22859734-22859794,22860016-22860116,
           22860567-22860614
          Length = 908

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 827 GSXFXMXRPGGAGXXWXKGSNRGLF 753
           G+ F + +PGG G  W    +RG+F
Sbjct: 407 GALFPVGKPGGHGAIWKLACDRGIF 431


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,601,856
Number of Sequences: 37544
Number of extensions: 397315
Number of successful extensions: 1066
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)