Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_G10
(936 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 33 0.25
12_02_0299 - 17051570-17052474,17053542-17053755 31 1.00
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 31 1.3
03_06_0758 - 36052261-36052301,36052463-36052697,36052895-360529... 31 1.3
06_03_1363 - 29576265-29577575 31 1.7
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.7
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 30 3.0
12_02_1174 - 26696869-26698191 29 5.3
07_01_0080 + 587674-588510 29 5.3
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 29 5.3
02_04_0400 - 22608519-22608844,22609044-22609122 29 5.3
01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,467... 29 5.3
05_01_0142 - 940421-940701,941262-941574 29 7.0
11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367,400... 28 9.3
02_01_0674 + 5020118-5020202,5020301-5020436,5021075-5021140,502... 28 9.3
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 33.5 bits (73), Expect = 0.25
Identities = 26/106 (24%), Positives = 29/106 (27%), Gaps = 1/106 (0%)
Frame = +1
Query: 577 FXXPXPXPPPXGPXPPXGGWXXPFXPRXGGXXXXXXMGXXPXKTL*XPGXXXXPKTXXXP 756
+ P P P G PP G PF P PG + P
Sbjct: 28 YGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNF-GPGPPQQQQPPPPP 86
Query: 757 LXXVVXPXPPPP-GXTXXKXXXXXXXXXXXXXXXXPPGVPPPXXPP 891
P PPPP G + PP PPP PP
Sbjct: 87 QMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPP 132
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 532 PGXKKXPXPXXXGXXFXXPXPXPPPXGPXPP 624
P P P F P P PPP GP PP
Sbjct: 36 PAYGHMPPPQGAPPPFLAPPP-PPPPGPPPP 65
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 31.5 bits (68), Expect = 1.00
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +1
Query: 532 PGXKKXPXPXXXGXXFXXPXPXPPPXGPXPPXGGWXXPFXP 654
P + P P P P PPP P PP + PF P
Sbjct: 300 PFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSFPWPFPP 340
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/102 (25%), Positives = 27/102 (26%)
Frame = +1
Query: 586 PXPXPPPXGPXPPXGGWXXPFXPRXGGXXXXXXMGXXPXKTL*XPGXXXXPKTXXXPLXX 765
P P PP P P P P GG MG P P P P
Sbjct: 387 PQPAVPPGPPAVPAPPTYPPADPAAGGYTSQPYMGAPPP----PPPGSYAPVPWGQPPPY 442
Query: 766 VVXPXPPPPGXTXXKXXXXXXXXXXXXXXXXPPGVPPPXXPP 891
P PPPPG + PP PP
Sbjct: 443 ASYP-PPPPGSSMYNPPPPAPGQATPPPYGVQYAPPPAPIPP 483
>03_06_0758 -
36052261-36052301,36052463-36052697,36052895-36052966,
36056477-36056567,36056650-36056872,36056964-36057300,
36057406-36057588
Length = 393
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 487 GXFXXXXXGGGGXGXPGXKKXPXPXXXGXXFXXPXPXPPPXGPXPP 624
G F GGGG G + P P P PPP PP
Sbjct: 110 GSFGGRRRGGGGGGFDALYRAPIGPYVRGATAPPPPPPPPMAVAPP 155
>06_03_1363 - 29576265-29577575
Length = 436
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 561 PGGGXFFXXGXTPPPPPP 508
PGGG TPPPPPP
Sbjct: 378 PGGGKVLIVDVTPPPPPP 395
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +1
Query: 232 PPKPKXXANXXXAPKKXXPXXXPXXGVPPLXXXLGXPKTKNXXXXXAPPXXKXPKKK 402
PPKP A P K P P G PP G P PP KK
Sbjct: 318 PPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKK 374
Score = 23.4 bits (48), Expect(2) = 7.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 534 GXTPPPPPP 508
G +PPPPPP
Sbjct: 361 GPSPPPPPP 369
Score = 23.4 bits (48), Expect(2) = 7.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 525 PPPPPPG 505
PPPPPPG
Sbjct: 365 PPPPPPG 371
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 4/43 (9%)
Frame = +1
Query: 532 PGXKKXPXPXXXGXXFXXPXPXPPPXG----PXPPXGGWXXPF 648
PG K P P G P P PP G P PP W PF
Sbjct: 192 PGPKPKPKPPKPG---PKPKPKPPKPGPKPKPGPPQPWWPIPF 231
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1
Query: 775 PXPPPPGXTXXKXXXXXXXXXXXXXXXXPPGVPPPXXPP 891
P PPPP + PP +PPP PP
Sbjct: 121 PVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPP 159
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 511 GGGGXGXPGXKKXPXPXXXGXXFXXPXPXPPPXGPXPP 624
GG G P P G P P PPP P PP
Sbjct: 83 GGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPPPPP 120
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 29.1 bits (62), Expect = 5.3
Identities = 22/69 (31%), Positives = 23/69 (33%)
Frame = -2
Query: 791 GGGGXGXTTXXRGXXXVLGQXXXPGX*RVXXGXXPIXXXXXXPPXRGXNGXXQPPXGGXG 612
GGGG G RG G G G + P G G P GG G
Sbjct: 6 GGGGRGRGRG-RGGGRGGGGGDGRGGGYGGAGGGGVGGRGGRGPPGGGGGRGYEPGGGRG 64
Query: 611 PXGGGXGXG 585
GGG G G
Sbjct: 65 YGGGGGGGG 73
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = -2
Query: 653 GXNGXXQPPXGGXGPXGGGXGXGXXKXXPXXXGXGXFFXP--GXPXPPPP 510
G G GG G GGG G G G G ++ P G PP P
Sbjct: 57 GGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGYYPPWNGGYYPPGP 106
>01_01_0623 +
4672581-4673413,4674274-4674389,4674694-4674902,
4675953-4676072,4676185-4676313,4676394-4676442,
4676899-4676970,4677574-4677707,4677798-4677915,
4678332-4678541,4678630-4678942,4679539-4679632,
4679854-4679962,4680243-4680514,4680597-4680724,
4680832-4681066,4681570-4681758,4681845-4682128,
4682218-4682398,4682486-4682728,4682904-4682986,
4683119-4683227,4687996-4688091,4688675-4688764,
4688881-4689129,4689233-4689412,4690179-4690250,
4691385-4691474,4691605-4691705,4691794-4691959
Length = 1757
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +1
Query: 511 GGGGXGXPGXKKXPXPXXXGXXFXXPXPXPPPXGPXP 621
GGGG G ++ P P P PPP P P
Sbjct: 26 GGGGEGEATDREAPDPYSILTWHDYSPPSPPPPPPPP 62
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 28.7 bits (61), Expect = 7.0
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 6/66 (9%)
Frame = +1
Query: 487 GXFXXXXXG-GGGXGXPGXKKXPX---PXXXGXXFXXPXPXPPPXGPXPPXGGWXXP--F 648
G F G GG G P + P P G P PPP G PP G P
Sbjct: 14 GLFSNMMHGVAGGHGYPPHQGYPPQGYPPPPGAYPPPPGAYPPPPGAYPPPPGAYPPQHG 73
Query: 649 XPRXGG 666
P+ GG
Sbjct: 74 YPQPGG 79
>11_01_0515 +
4003167-4003229,4003318-4003738,4004224-4004367,
4004474-4004556,4004661-4004775,4005309-4005400,
4005558-4005612,4005689-4005834,4005888-4006001,
4006149-4006342,4006985-4007112,4008526-4008583,
4009800-4009876,4010214-4010263,4010336-4010515,
4010633-4010731,4010816-4011133,4011221-4011281,
4011693-4012781,4012951-4013005,4013133-4013291,
4013923-4014442
Length = 1406
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
Frame = +1
Query: 586 PXPXPPPXG-PXPPXGGWXXP 645
P P PP P PP GGW P
Sbjct: 105 PVPGSPPAAAPVPPSGGWGRP 125
>02_01_0674 +
5020118-5020202,5020301-5020436,5021075-5021140,
5021219-5021290,5021362-5021433,5024242-5024301,
5024494-5024565,5024655-5024720,5024798-5024863,
5024945-5025273,5025713-5025969,5026213-5026484,
5026580-5026715,5026833-5026972,5027051-5027207,
5027476-5027634
Length = 714
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 586 PXPXPPPXGPXPPXGGWXXPFXPRXGG 666
P P PPP P PP P PR G
Sbjct: 242 PAPPPPPFMPPPPRRPRNRPSHPRGSG 268
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,114,838
Number of Sequences: 37544
Number of extensions: 375307
Number of successful extensions: 4994
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4574
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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