Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_G10
         (936 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.20 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   7.6  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.1 bits (62), Expect = 0.20
 Identities = 21/68 (30%), Positives = 23/68 (33%)
 Frame = +1

Query: 586 PXPXPPPXGPXPPXGGWXXPFXPRXGGXXXXXXMGXXPXKTL*XPGXXXXPKTXXXPLXX 765
           P   PPP  P PP  G   P  P  GG          P   L   G    P T   P   
Sbjct: 577 PNAQPPPAPPPPPPMG--PPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPPVTILVP-YP 633

Query: 766 VVXPXPPP 789
           ++ P P P
Sbjct: 634 IIIPLPLP 641


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -2

Query: 653 GXNGXXQPPXGGXGPXGGGXGXG 585
           G  G      GG GP GGG G G
Sbjct: 210 GAPGGGGGSSGGPGPGGGGGGGG 232


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 13/40 (32%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
 Frame = +1

Query: 517 GGXGXP--GXKKXPXPXXXGXXFXXPXPXPPPXGPXPPXG 630
           G  G P  G    P P   G  +  P   P P  P  P G
Sbjct: 196 GNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPG 235


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,016
Number of Sequences: 2352
Number of extensions: 7896
Number of successful extensions: 30
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102122397
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)