Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_G05
         (941 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46787-4|CAA86742.1|  166|Caenorhabditis elegans Hypothetical pr...   121   9e-28
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr...    28   8.4  
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr...    28   8.4  
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.     28   8.4  

>Z46787-4|CAA86742.1|  166|Caenorhabditis elegans Hypothetical
           protein C16C10.4 protein.
          Length = 166

 Score =  121 bits (291), Expect = 9e-28
 Identities = 52/90 (57%), Positives = 72/90 (80%)
 Frame = +2

Query: 323 GNVPHNELQIYTWMDATLRELTGLVKEVNPETRRKGTYFDFAIVYPDMRXPTYRMREIGV 502
           G+VP +ELQ++TWMD +LRELT L+KEVNP+ RRKGT FDFAIV  D   P Y +R++G 
Sbjct: 49  GSVPPSELQMHTWMDCSLRELTSLIKEVNPDARRKGTTFDFAIVQADRGSPRYILRDVGN 108

Query: 503 TCSGQRGGDDNKTLSQLKXQIGNYLDISIT 592
           T +G+RG DDNKTL Q K ++G+++D++I+
Sbjct: 109 TTNGERGIDDNKTLQQCKFEVGDFVDVAIS 138


>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical
           protein E03A3.6 protein.
          Length = 2089

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/68 (22%), Positives = 31/68 (45%)
 Frame = +2

Query: 329 VPHNELQIYTWMDATLRELTGLVKEVNPETRRKGTYFDFAIVYPDMRXPTYRMREIGVTC 508
           +P++ + + TW     R L  +V +   + + +       I  PD+    +  +E+    
Sbjct: 540 MPYDVISLETWSRVMPRWLEAIVNDCTEDNQPELKILLCKIFEPDLCPLPFETKEVYGFM 599

Query: 509 SGQRGGDD 532
           +G+ GGDD
Sbjct: 600 TGRIGGDD 607


>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical
           protein E03A3.6 protein.
          Length = 2089

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/68 (22%), Positives = 31/68 (45%)
 Frame = +2

Query: 329 VPHNELQIYTWMDATLRELTGLVKEVNPETRRKGTYFDFAIVYPDMRXPTYRMREIGVTC 508
           +P++ + + TW     R L  +V +   + + +       I  PD+    +  +E+    
Sbjct: 540 MPYDVISLETWSRVMPRWLEAIVNDCTEDNQPELKILLCKIFEPDLCPLPFETKEVYGFM 599

Query: 509 SGQRGGDD 532
           +G+ GGDD
Sbjct: 600 TGRIGGDD 607


>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
          Length = 2084

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/68 (22%), Positives = 31/68 (45%)
 Frame = +2

Query: 329 VPHNELQIYTWMDATLRELTGLVKEVNPETRRKGTYFDFAIVYPDMRXPTYRMREIGVTC 508
           +P++ + + TW     R L  +V +   + + +       I  PD+    +  +E+    
Sbjct: 533 MPYDVISLETWSRVMPRWLEAIVNDCTEDNQPELKILLCKIFEPDLCPLPFETKEVYGFM 592

Query: 509 SGQRGGDD 532
           +G+ GGDD
Sbjct: 593 TGRIGGDD 600


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,687,090
Number of Sequences: 27780
Number of extensions: 184599
Number of successful extensions: 405
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 405
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)